EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000004616 (Gene tree)
Gene ID: 105863785
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 13898 bases
Position: chr17:41551223-41565120
Accession: 105863785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000048933	SAP	PF02037.27	3.5e-10	1	1
ENSMICP00000004205	SAP	PF02037.27	3.7e-10	1	1
ENSMICP00000041148	SAP	PF02037.27	3.7e-10	1	1
ENSMICP00000017097	SAP	PF02037.27	3.8e-10	1	1
ENSMICP00000026905	SAP	PF02037.27	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000067562	HNRNPU-205	2232	-	ENSMICP00000048933	743 (aa)	-	UPI000C2EB331
ENSMICT00000004614	HNRNPU-202	2358	-	ENSMICP00000004205	785 (aa)	-	UPI000C2EB999
ENSMICT00000027153	HNRNPU-204	2391	XM_012751268	ENSMICP00000017097	796 (aa)	XP_012606722	UPI000C2EAF3F
ENSMICT00000028049	HNRNPU-201	3126	XM_012751267	ENSMICP00000026905	824 (aa)	XP_012606721	UPI0006431534
ENSMICT00000067822	HNRNPU-203	2424	-	ENSMICP00000041148	807 (aa)	-	UPI000C2EBF87
ENSMICT00000060806	HNRNPU-206	1632	-	ENSMICP00000044728	543 (aa)	-	UPI000C2EC9E0

Gene Model

Click here to download ENSMICG00000004616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000004616	HNRNPU	76	43.712	ENSMICG00000009943	-	92	42.003
ENSMICG00000004616	HNRNPU	82	48.620	ENSMICG00000001989	HNRNPUL1	63	55.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004616	HNRNPU	100	98.909	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSMICG00000004616	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSMICG00000004616	HNRNPU	99	99.062	ENSAMEG00000009145	HNRNPU	100	94.915	Ailuropoda_melanoleuca
ENSMICG00000004616	HNRNPU	99	51.589	ENSACIG00000012138	hnrnpub	90	80.952	Amphilophus_citrinellus
ENSMICG00000004616	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	99	52.729	Amphiprion_ocellaris
ENSMICG00000004616	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	99	52.729	Amphiprion_percula
ENSMICG00000004616	HNRNPU	74	72.549	ENSATEG00000016178	hnrnpub	99	50.231	Anabas_testudineus
ENSMICG00000004616	HNRNPU	80	89.259	ENSACAG00000004511	HNRNPU	100	74.709	Anolis_carolinensis
ENSMICG00000004616	HNRNPU	100	98.656	ENSANAG00000033895	-	100	98.656	Aotus_nancymaae
ENSMICG00000004616	HNRNPU	78	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSMICG00000004616	HNRNPU	100	98.545	ENSBTAG00000007606	HNRNPU	100	98.545	Bos_taurus
ENSMICG00000004616	HNRNPU	100	98.545	ENSCJAG00000016914	HNRNPU	100	98.545	Callithrix_jacchus
ENSMICG00000004616	HNRNPU	100	97.643	ENSCAFG00020000918	HNRNPU	100	97.643	Canis_lupus_dingo
ENSMICG00000004616	HNRNPU	100	97.643	ENSCHIG00000004900	HNRNPU	100	97.643	Capra_hircus
ENSMICG00000004616	HNRNPU	100	97.697	ENSCPOG00000011887	HNRNPU	100	97.697	Cavia_porcellus
ENSMICG00000004616	HNRNPU	100	98.545	ENSCCAG00000037859	-	100	98.545	Cebus_capucinus
ENSMICG00000004616	HNRNPU	100	98.909	ENSCATG00000035273	HNRNPU	100	98.909	Cercocebus_atys
ENSMICG00000004616	HNRNPU	100	97.939	ENSCLAG00000007100	HNRNPU	100	97.939	Chinchilla_lanigera
ENSMICG00000004616	HNRNPU	100	97.767	ENSCSAG00000009219	HNRNPU	100	97.767	Chlorocebus_sabaeus
ENSMICG00000004616	HNRNPU	82	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSMICG00000004616	HNRNPU	97	88.454	ENSCPBG00000009415	HNRNPU	88	92.137	Chrysemys_picta_bellii
ENSMICG00000004616	HNRNPU	98	99.248	ENSCANG00000022780	HNRNPU	100	96.487	Colobus_angolensis_palliatus
ENSMICG00000004616	HNRNPU	99	99.060	ENSCGRG00001020525	Hnrnpu	100	96.504	Cricetulus_griseus_chok1gshd
ENSMICG00000004616	HNRNPU	80	67.213	ENSCSEG00000010804	hnrnpub	97	61.279	Cynoglossus_semilaevis
ENSMICG00000004616	HNRNPU	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSMICG00000004616	HNRNPU	80	85.714	ENSDARG00000004735	hnrnpub	96	59.451	Danio_rerio
ENSMICG00000004616	HNRNPU	81	62.319	ENSDARG00000015206	hnrnpua	97	59.325	Danio_rerio
ENSMICG00000004616	HNRNPU	81	100.000	ENSDNOG00000000215	HNRNPU	89	100.000	Dasypus_novemcinctus
ENSMICG00000004616	HNRNPU	100	91.283	ENSDORG00000015491	Hnrnpu	100	91.656	Dipodomys_ordii
ENSMICG00000004616	HNRNPU	96	99.248	ENSETEG00000014565	HNRNPU	100	93.665	Echinops_telfairi
ENSMICG00000004616	HNRNPU	99	99.624	ENSEASG00005003017	HNRNPU	100	97.146	Equus_asinus_asinus
ENSMICG00000004616	HNRNPU	99	99.436	ENSECAG00000007955	HNRNPU	100	97.022	Equus_caballus
ENSMICG00000004616	HNRNPU	99	51.418	ENSELUG00000011966	hnrnpua	89	65.079	Esox_lucius
ENSMICG00000004616	HNRNPU	99	50.335	ENSELUG00000010733	hnrnpub	82	56.750	Esox_lucius
ENSMICG00000004616	HNRNPU	100	98.387	ENSFCAG00000002156	HNRNPU	100	98.387	Felis_catus
ENSMICG00000004616	HNRNPU	90	99.158	ENSFDAG00000006026	HNRNPU	100	99.158	Fukomys_damarensis
ENSMICG00000004616	HNRNPU	80	69.643	ENSFHEG00000022639	hnrnpub	88	69.643	Fundulus_heteroclitus
ENSMICG00000004616	HNRNPU	75	58.786	ENSGMOG00000001755	hnrnpub	99	53.471	Gadus_morhua
ENSMICG00000004616	HNRNPU	97	88.104	ENSGALG00000010671	HNRNPU	100	78.302	Gallus_gallus
ENSMICG00000004616	HNRNPU	86	52.424	ENSGAFG00000009369	hnrnpub	99	50.461	Gambusia_affinis
ENSMICG00000004616	HNRNPU	78	74.000	ENSGACG00000004679	hnrnpub	99	53.446	Gasterosteus_aculeatus
ENSMICG00000004616	HNRNPU	100	98.424	ENSGGOG00000004061	HNRNPU	99	99.436	Gorilla_gorilla
ENSMICG00000004616	HNRNPU	75	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSMICG00000004616	HNRNPU	100	97.136	ENSHGLG00000010594	-	100	97.136	Heterocephalus_glaber_female
ENSMICG00000004616	HNRNPU	90	99.496	ENSHGLG00100015093	HNRNPU	100	99.496	Heterocephalus_glaber_male
ENSMICG00000004616	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSMICG00000004616	HNRNPU	79	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSMICG00000004616	HNRNPU	100	96.493	ENSJJAG00000011371	Hnrnpu	100	96.493	Jaculus_jaculus
ENSMICG00000004616	HNRNPU	81	63.077	ENSKMAG00000004532	hnrnpub	95	55.105	Kryptolebias_marmoratus
ENSMICG00000004616	HNRNPU	82	58.667	ENSLBEG00000022520	hnrnpub	98	48.843	Labrus_bergylta
ENSMICG00000004616	HNRNPU	99	63.086	ENSLACG00000017463	HNRNPU	99	63.060	Latimeria_chalumnae
ENSMICG00000004616	HNRNPU	78	80.435	ENSLOCG00000016652	hnrnpua	99	59.096	Lepisosteus_oculatus
ENSMICG00000004616	HNRNPU	100	98.422	ENSLAFG00000021377	HNRNPU	100	98.422	Loxodonta_africana
ENSMICG00000004616	HNRNPU	100	98.909	ENSMFAG00000037308	HNRNPU	100	98.909	Macaca_fascicularis
ENSMICG00000004616	HNRNPU	100	98.623	ENSMMUG00000021098	HNRNPU	100	98.623	Macaca_mulatta
ENSMICG00000004616	HNRNPU	100	98.909	ENSMNEG00000043645	HNRNPU	100	98.909	Macaca_nemestrina
ENSMICG00000004616	HNRNPU	79	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSMICG00000004616	HNRNPU	78	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSMICG00000004616	HNRNPU	99	99.060	ENSMAUG00000008842	Hnrnpu	100	96.629	Mesocricetus_auratus
ENSMICG00000004616	HNRNPU	99	98.872	ENSMOCG00000015623	Hnrnpu	100	96.380	Microtus_ochrogaster
ENSMICG00000004616	HNRNPU	100	91.059	ENSMODG00000006515	HNRNPU	100	93.059	Monodelphis_domestica
ENSMICG00000004616	HNRNPU	76	70.588	ENSMALG00000018243	hnrnpub	85	61.655	Monopterus_albus
ENSMICG00000004616	HNRNPU	100	96.629	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.629	Mus_caroli
ENSMICG00000004616	HNRNPU	100	96.509	ENSMUSG00000039630	Hnrnpu	100	96.509	Mus_musculus
ENSMICG00000004616	HNRNPU	100	94.147	MGP_PahariEiJ_G0028193	Hnrnpu	100	94.894	Mus_pahari
ENSMICG00000004616	HNRNPU	100	96.509	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.509	Mus_spretus
ENSMICG00000004616	HNRNPU	92	97.561	ENSMLUG00000000475	HNRNPU	100	88.614	Myotis_lucifugus
ENSMICG00000004616	HNRNPU	100	96.504	ENSNGAG00000019075	Hnrnpu	100	96.504	Nannospalax_galili
ENSMICG00000004616	HNRNPU	78	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSMICG00000004616	HNRNPU	99	88.647	ENSMEUG00000000541	HNRNPU	100	90.580	Notamacropus_eugenii
ENSMICG00000004616	HNRNPU	70	98.058	ENSODEG00000014458	-	100	98.058	Octodon_degus
ENSMICG00000004616	HNRNPU	78	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSMICG00000004616	HNRNPU	97	99.806	ENSOCUG00000014469	HNRNPU	93	98.639	Oryctolagus_cuniculus
ENSMICG00000004616	HNRNPU	79	78.261	ENSORLG00000016114	hnrnpub	79	52.119	Oryzias_latipes
ENSMICG00000004616	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSMICG00000004616	HNRNPU	79	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSMICG00000004616	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	95	54.737	Oryzias_melastigma
ENSMICG00000004616	HNRNPU	100	98.261	ENSOGAG00000014024	HNRNPU	100	98.261	Otolemur_garnettii
ENSMICG00000004616	HNRNPU	83	100.000	ENSOARG00000004985	HNRNPU	92	99.161	Ovis_aries
ENSMICG00000004616	HNRNPU	100	98.909	ENSPPAG00000038652	HNRNPU	100	98.909	Pan_paniscus
ENSMICG00000004616	HNRNPU	100	98.545	ENSPPRG00000002662	HNRNPU	100	98.545	Panthera_pardus
ENSMICG00000004616	HNRNPU	100	98.909	ENSPTRG00000002182	HNRNPU	100	98.909	Pan_troglodytes
ENSMICG00000004616	HNRNPU	100	98.871	ENSPANG00000011643	HNRNPU	100	98.871	Papio_anubis
ENSMICG00000004616	HNRNPU	99	56.763	ENSPKIG00000022332	hnrnpub	84	78.261	Paramormyrops_kingsleyae
ENSMICG00000004616	HNRNPU	76	65.403	ENSPKIG00000006885	hnrnpua	78	66.720	Paramormyrops_kingsleyae
ENSMICG00000004616	HNRNPU	100	95.346	ENSPCIG00000008657	HNRNPU	100	95.346	Phascolarctos_cinereus
ENSMICG00000004616	HNRNPU	78	64.062	ENSPFOG00000002908	hnrnpub	89	60.526	Poecilia_formosa
ENSMICG00000004616	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.526	Poecilia_latipinna
ENSMICG00000004616	HNRNPU	100	99.879	ENSPCOG00000018655	-	100	99.879	Propithecus_coquereli
ENSMICG00000004616	HNRNPU	100	94.161	ENSPCOG00000003883	-	100	94.161	Propithecus_coquereli
ENSMICG00000004616	HNRNPU	100	98.545	ENSPVAG00000002581	HNRNPU	100	98.545	Pteropus_vampyrus
ENSMICG00000004616	HNRNPU	78	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSMICG00000004616	HNRNPU	99	57.444	ENSPNAG00000001055	hnrnpub	99	56.893	Pygocentrus_nattereri
ENSMICG00000004616	HNRNPU	100	96.255	ENSRNOG00000033790	Hnrnpu	100	96.255	Rattus_norvegicus
ENSMICG00000004616	HNRNPU	100	97.747	ENSRBIG00000031519	HNRNPU	100	97.747	Rhinopithecus_bieti
ENSMICG00000004616	HNRNPU	100	97.883	ENSRROG00000041642	HNRNPU	100	97.883	Rhinopithecus_roxellana
ENSMICG00000004616	HNRNPU	99	57.679	ENSSFOG00015001124	hnrnpub	94	64.319	Scleropages_formosus
ENSMICG00000004616	HNRNPU	94	60.419	ENSSFOG00015019004	hnrnpu	98	59.395	Scleropages_formosus
ENSMICG00000004616	HNRNPU	74	70.588	ENSSMAG00000003607	hnrnpub	99	52.601	Scophthalmus_maximus
ENSMICG00000004616	HNRNPU	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSMICG00000004616	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	98	50.173	Seriola_lalandi_dorsalis
ENSMICG00000004616	HNRNPU	97	91.370	ENSSPUG00000011393	HNRNPU	90	90.994	Sphenodon_punctatus
ENSMICG00000004616	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	86	78.261	Stegastes_partitus
ENSMICG00000004616	HNRNPU	100	98.788	ENSSSCG00000010877	HNRNPU	100	98.788	Sus_scrofa
ENSMICG00000004616	HNRNPU	84	57.738	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSMICG00000004616	HNRNPU	99	47.960	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSMICG00000004616	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSMICG00000004616	HNRNPU	100	98.788	ENSUAMG00000021120	HNRNPU	100	98.788	Ursus_americanus
ENSMICG00000004616	HNRNPU	99	86.221	ENSUMAG00000012322	HNRNPU	98	94.671	Ursus_maritimus
ENSMICG00000004616	HNRNPU	87	96.396	ENSVPAG00000010520	HNRNPU	91	96.396	Vicugna_pacos
ENSMICG00000004616	HNRNPU	100	97.643	ENSVVUG00000026524	HNRNPU	100	97.643	Vulpes_vulpes
ENSMICG00000004616	HNRNPU	99	75.949	ENSXETG00000011386	hnrnpu	99	69.024	Xenopus_tropicalis
ENSMICG00000004616	HNRNPU	92	78.261	ENSXMAG00000010356	hnrnpub	94	55.945	Xiphophorus_maculatus