EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000004686 (Gene tree)
Gene ID: 105879108
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 30337 bases
Position: chr31:44313934-44344270
Accession: 105879108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000017413	Nop52	PF05997.12	6.1e-73	1	1
ENSMICP00000004273	Nop52	PF05997.12	7e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000029438	RRP1B-201	5495	XM_012779083	ENSMICP00000017413	737 (aa)	XP_012634537	UPI00064290D2
ENSMICT00000004690	RRP1B-202	6358	-	ENSMICP00000004273	783 (aa)	-	UPI000C2EC472

Gene Model

Click here to download ENSMICG00000004686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000004686	RRP1B	51	51.444	ENSMICG00000004700	RRP1	84	51.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004686	RRP1B	100	78.553	ENSG00000160208	RRP1B	100	78.421	Homo_sapiens
ENSMICG00000004686	RRP1B	56	50.119	ENSG00000160214	RRP1	78	65.714	Homo_sapiens
ENSMICG00000004686	RRP1B	66	48.438	ENSAPOG00000007490	-	58	47.011	Acanthochromis_polyacanthus
ENSMICG00000004686	RRP1B	52	49.357	ENSAMEG00000011448	RRP1	82	49.357	Ailuropoda_melanoleuca
ENSMICG00000004686	RRP1B	74	81.010	ENSAMEG00000011401	RRP1B	76	80.620	Ailuropoda_melanoleuca
ENSMICG00000004686	RRP1B	60	51.351	ENSAOCG00000017894	-	100	58.163	Amphiprion_ocellaris
ENSMICG00000004686	RRP1B	66	46.875	ENSAPEG00000024150	-	55	46.917	Amphiprion_percula
ENSMICG00000004686	RRP1B	64	50.420	ENSATEG00000005045	-	52	50.420	Anabas_testudineus
ENSMICG00000004686	RRP1B	94	47.354	ENSAPLG00000004310	RRP1B	100	47.211	Anas_platyrhynchos
ENSMICG00000004686	RRP1B	99	45.288	ENSACAG00000017851	RRP1B	95	46.084	Anolis_carolinensis
ENSMICG00000004686	RRP1B	100	76.610	ENSANAG00000034889	RRP1B	100	76.478	Aotus_nancymaae
ENSMICG00000004686	RRP1B	100	67.942	ENSBTAG00000017418	RRP1B	100	68.241	Bos_taurus
ENSMICG00000004686	RRP1B	100	74.605	ENSCJAG00000017077	RRP1B	100	74.474	Callithrix_jacchus
ENSMICG00000004686	RRP1B	94	68.252	ENSCAFG00000010621	RRP1B	99	69.510	Canis_familiaris
ENSMICG00000004686	RRP1B	100	69.826	ENSCAFG00020018901	RRP1B	100	71.123	Canis_lupus_dingo
ENSMICG00000004686	RRP1B	100	68.997	ENSCHIG00000021519	RRP1B	100	69.129	Capra_hircus
ENSMICG00000004686	RRP1B	100	64.439	ENSCPOG00000002396	RRP1B	100	64.171	Cavia_porcellus
ENSMICG00000004686	RRP1B	56	49.881	ENSCCAG00000029828	RRP1	77	53.297	Cebus_capucinus
ENSMICG00000004686	RRP1B	100	76.447	ENSCCAG00000029384	RRP1B	100	76.316	Cebus_capucinus
ENSMICG00000004686	RRP1B	100	77.500	ENSCATG00000017423	RRP1B	100	77.368	Cercocebus_atys
ENSMICG00000004686	RRP1B	57	44.444	ENSCLAG00000011639	RRP1	83	46.530	Chinchilla_lanigera
ENSMICG00000004686	RRP1B	100	65.773	ENSCLAG00000005622	RRP1B	100	65.517	Chinchilla_lanigera
ENSMICG00000004686	RRP1B	100	77.763	ENSCSAG00000007961	RRP1B	100	77.632	Chlorocebus_sabaeus
ENSMICG00000004686	RRP1B	52	65.195	ENSCHOG00000002426	-	63	65.195	Choloepus_hoffmanni
ENSMICG00000004686	RRP1B	99	50.837	ENSCPBG00000010310	RRP1B	98	50.607	Chrysemys_picta_bellii
ENSMICG00000004686	RRP1B	100	77.500	ENSCANG00000040952	RRP1B	100	77.368	Colobus_angolensis_palliatus
ENSMICG00000004686	RRP1B	100	64.427	ENSCGRG00001010889	-	100	64.427	Cricetulus_griseus_chok1gshd
ENSMICG00000004686	RRP1B	55	47.826	ENSCGRG00001011920	Rrp1	82	50.267	Cricetulus_griseus_chok1gshd
ENSMICG00000004686	RRP1B	100	64.295	ENSCGRG00001023882	-	100	64.295	Cricetulus_griseus_chok1gshd
ENSMICG00000004686	RRP1B	94	63.687	ENSCGRG00000001553	Rrp1b	97	63.598	Cricetulus_griseus_crigri
ENSMICG00000004686	RRP1B	55	47.826	ENSCGRG00000008915	Rrp1	82	50.267	Cricetulus_griseus_crigri
ENSMICG00000004686	RRP1B	62	55.435	ENSCSEG00000020711	-	80	55.435	Cynoglossus_semilaevis
ENSMICG00000004686	RRP1B	50	43.089	ENSCVAG00000017568	-	93	43.631	Cyprinodon_variegatus
ENSMICG00000004686	RRP1B	56	48.471	ENSDNOG00000019880	RRP1	90	48.471	Dasypus_novemcinctus
ENSMICG00000004686	RRP1B	100	66.667	ENSDNOG00000032774	RRP1B	100	66.271	Dasypus_novemcinctus
ENSMICG00000004686	RRP1B	93	60.000	ENSDORG00000005496	Rrp1b	100	60.388	Dipodomys_ordii
ENSMICG00000004686	RRP1B	100	60.233	ENSETEG00000019489	RRP1B	100	61.711	Echinops_telfairi
ENSMICG00000004686	RRP1B	56	47.470	ENSEASG00005001673	RRP1	83	50.794	Equus_asinus_asinus
ENSMICG00000004686	RRP1B	100	73.712	ENSEASG00005001687	RRP1B	100	74.769	Equus_asinus_asinus
ENSMICG00000004686	RRP1B	100	73.879	ENSECAG00000018018	RRP1B	100	74.769	Equus_caballus
ENSMICG00000004686	RRP1B	56	47.143	ENSECAG00000015703	RRP1	83	50.928	Equus_caballus
ENSMICG00000004686	RRP1B	66	52.800	ENSELUG00000015885	-	89	47.289	Esox_lucius
ENSMICG00000004686	RRP1B	51	49.737	ENSFCAG00000008434	RRP1	81	51.064	Felis_catus
ENSMICG00000004686	RRP1B	100	69.565	ENSFCAG00000010272	RRP1B	100	69.657	Felis_catus
ENSMICG00000004686	RRP1B	92	45.479	ENSFALG00000002024	RRP1B	70	58.523	Ficedula_albicollis
ENSMICG00000004686	RRP1B	96	65.503	ENSFDAG00000010899	RRP1B	96	65.084	Fukomys_damarensis
ENSMICG00000004686	RRP1B	57	46.301	ENSFDAG00000013728	RRP1	80	49.206	Fukomys_damarensis
ENSMICG00000004686	RRP1B	55	52.632	ENSFHEG00000016314	-	51	55.789	Fundulus_heteroclitus
ENSMICG00000004686	RRP1B	64	49.091	ENSGMOG00000001953	-	68	49.091	Gadus_morhua
ENSMICG00000004686	RRP1B	100	46.939	ENSGALG00000035696	RRP1B	50	60.677	Gallus_gallus
ENSMICG00000004686	RRP1B	69	48.000	ENSGACG00000001438	rrp1	100	34.387	Gasterosteus_aculeatus
ENSMICG00000004686	RRP1B	100	50.771	ENSGAGG00000000375	RRP1B	80	67.188	Gopherus_agassizii
ENSMICG00000004686	RRP1B	56	49.642	ENSGGOG00000000173	RRP1	80	51.979	Gorilla_gorilla
ENSMICG00000004686	RRP1B	100	78.684	ENSGGOG00000012069	RRP1B	100	78.553	Gorilla_gorilla
ENSMICG00000004686	RRP1B	99	66.446	ENSHGLG00000004968	RRP1B	100	66.667	Heterocephalus_glaber_female
ENSMICG00000004686	RRP1B	92	69.101	ENSHGLG00100002232	RRP1B	99	59.572	Heterocephalus_glaber_male
ENSMICG00000004686	RRP1B	67	47.287	ENSHCOG00000018388	-	61	47.287	Hippocampus_comes
ENSMICG00000004686	RRP1B	61	46.667	ENSIPUG00000000673	-	73	43.782	Ictalurus_punctatus
ENSMICG00000004686	RRP1B	99	72.630	ENSSTOG00000011790	RRP1B	96	73.580	Ictidomys_tridecemlineatus
ENSMICG00000004686	RRP1B	54	50.372	ENSSTOG00000011116	RRP1	86	50.646	Ictidomys_tridecemlineatus
ENSMICG00000004686	RRP1B	100	60.966	ENSJJAG00000021279	Rrp1b	100	61.488	Jaculus_jaculus
ENSMICG00000004686	RRP1B	65	53.226	ENSLOCG00000004064	-	81	48.958	Lepisosteus_oculatus
ENSMICG00000004686	RRP1B	88	65.583	ENSLAFG00000000766	RRP1B	97	70.259	Loxodonta_africana
ENSMICG00000004686	RRP1B	53	50.250	ENSLAFG00000022901	RRP1	87	50.250	Loxodonta_africana
ENSMICG00000004686	RRP1B	100	78.553	ENSMFAG00000039152	RRP1B	100	78.421	Macaca_fascicularis
ENSMICG00000004686	RRP1B	61	46.537	ENSMFAG00000003202	RRP1	80	51.181	Macaca_fascicularis
ENSMICG00000004686	RRP1B	100	75.789	ENSMMUG00000000104	RRP1B	100	75.658	Macaca_mulatta
ENSMICG00000004686	RRP1B	61	47.174	ENSMMUG00000012304	RRP1	80	51.979	Macaca_mulatta
ENSMICG00000004686	RRP1B	61	46.537	ENSMNEG00000031210	RRP1	80	51.181	Macaca_nemestrina
ENSMICG00000004686	RRP1B	100	78.158	ENSMNEG00000034269	RRP1B	100	78.026	Macaca_nemestrina
ENSMICG00000004686	RRP1B	99	75.233	ENSMLEG00000040044	RRP1B	99	76.987	Mandrillus_leucophaeus
ENSMICG00000004686	RRP1B	52	59.115	ENSMGAG00000014591	RRP1B	100	47.036	Meleagris_gallopavo
ENSMICG00000004686	RRP1B	100	62.319	ENSMAUG00000021508	Rrp1b	100	62.319	Mesocricetus_auratus
ENSMICG00000004686	RRP1B	100	62.632	ENSMOCG00000001117	Rrp1b	100	62.368	Microtus_ochrogaster
ENSMICG00000004686	RRP1B	100	65.354	ENSMODG00000021033	RRP1B	100	65.354	Monodelphis_domestica
ENSMICG00000004686	RRP1B	51	46.296	ENSMALG00000010310	rrp1	97	46.296	Monopterus_albus
ENSMICG00000004686	RRP1B	100	60.474	MGP_CAROLIEiJ_G0021376	Rrp1b	100	60.738	Mus_caroli
ENSMICG00000004686	RRP1B	100	60.550	ENSMUSG00000058392	Rrp1b	100	60.367	Mus_musculus
ENSMICG00000004686	RRP1B	100	62.582	MGP_PahariEiJ_G0023695	Rrp1b	100	62.319	Mus_pahari
ENSMICG00000004686	RRP1B	100	60.157	MGP_SPRETEiJ_G0022290	Rrp1b	100	60.630	Mus_spretus
ENSMICG00000004686	RRP1B	52	46.882	ENSMPUG00000009826	RRP1	88	46.420	Mustela_putorius_furo
ENSMICG00000004686	RRP1B	83	64.409	ENSMPUG00000009810	RRP1B	99	64.669	Mustela_putorius_furo
ENSMICG00000004686	RRP1B	99	71.579	ENSMLUG00000007738	RRP1B	99	71.560	Myotis_lucifugus
ENSMICG00000004686	RRP1B	50	64.474	ENSMLUG00000017788	RRP1	68	61.983	Myotis_lucifugus
ENSMICG00000004686	RRP1B	100	66.534	ENSNGAG00000021073	Rrp1b	100	67.065	Nannospalax_galili
ENSMICG00000004686	RRP1B	100	74.474	ENSNLEG00000001490	RRP1B	100	74.342	Nomascus_leucogenys
ENSMICG00000004686	RRP1B	56	49.043	ENSNLEG00000034734	RRP1	80	51.587	Nomascus_leucogenys
ENSMICG00000004686	RRP1B	79	89.916	ENSMEUG00000003226	-	89	89.916	Notamacropus_eugenii
ENSMICG00000004686	RRP1B	100	61.949	ENSODEG00000013177	RRP1B	100	61.816	Octodon_degus
ENSMICG00000004686	RRP1B	99	52.763	ENSOANG00000006470	RRP1B	99	53.026	Ornithorhynchus_anatinus
ENSMICG00000004686	RRP1B	94	59.547	ENSOCUG00000025931	RRP1B	100	56.825	Oryctolagus_cuniculus
ENSMICG00000004686	RRP1B	69	46.853	ENSORLG00020007199	-	56	53.763	Oryzias_latipes_hni
ENSMICG00000004686	RRP1B	69	45.455	ENSORLG00015004425	-	58	46.438	Oryzias_latipes_hsok
ENSMICG00000004686	RRP1B	66	50.000	ENSOMEG00000016910	-	56	58.025	Oryzias_melastigma
ENSMICG00000004686	RRP1B	51	51.316	ENSOGAG00000006105	RRP1	83	51.697	Otolemur_garnettii
ENSMICG00000004686	RRP1B	87	88.430	ENSOGAG00000009872	RRP1B	96	88.430	Otolemur_garnettii
ENSMICG00000004686	RRP1B	94	66.434	ENSOARG00000011314	RRP1B	100	66.573	Ovis_aries
ENSMICG00000004686	RRP1B	94	77.406	ENSPPAG00000035319	RRP1B	99	77.159	Pan_paniscus
ENSMICG00000004686	RRP1B	100	68.032	ENSPPRG00000010356	RRP1B	100	68.122	Panthera_pardus
ENSMICG00000004686	RRP1B	50	50.134	ENSPPRG00000010656	RRP1	80	50.949	Panthera_pardus
ENSMICG00000004686	RRP1B	76	76.762	ENSPTIG00000016894	RRP1B	93	76.762	Panthera_tigris_altaica
ENSMICG00000004686	RRP1B	53	42.000	ENSPTIG00000019473	RRP1	79	43.855	Panthera_tigris_altaica
ENSMICG00000004686	RRP1B	100	78.289	ENSPTRG00000013958	RRP1B	100	78.158	Pan_troglodytes
ENSMICG00000004686	RRP1B	56	50.119	ENSPTRG00000013962	RRP1	80	52.507	Pan_troglodytes
ENSMICG00000004686	RRP1B	100	78.158	ENSPANG00000011090	RRP1B	100	78.026	Papio_anubis
ENSMICG00000004686	RRP1B	99	52.078	ENSPSIG00000008152	RRP1B	96	50.688	Pelodiscus_sinensis
ENSMICG00000004686	RRP1B	100	64.993	ENSPEMG00000022490	Rrp1b	100	64.323	Peromyscus_maniculatus_bairdii
ENSMICG00000004686	RRP1B	100	65.838	ENSPCIG00000015513	RRP1B	100	65.576	Phascolarctos_cinereus
ENSMICG00000004686	RRP1B	57	53.919	ENSPCIG00000015523	-	74	60.882	Phascolarctos_cinereus
ENSMICG00000004686	RRP1B	100	37.154	ENSPFOG00000007424	-	99	36.720	Poecilia_formosa
ENSMICG00000004686	RRP1B	50	45.232	ENSPLAG00000016684	-	52	45.232	Poecilia_latipinna
ENSMICG00000004686	RRP1B	66	47.328	ENSPREG00000015673	-	59	47.328	Poecilia_reticulata
ENSMICG00000004686	RRP1B	100	78.421	ENSPPYG00000011470	RRP1B	100	78.289	Pongo_abelii
ENSMICG00000004686	RRP1B	56	50.119	ENSPPYG00000011474	RRP1	80	52.507	Pongo_abelii
ENSMICG00000004686	RRP1B	85	86.316	ENSPCAG00000013723	RRP1B	91	86.316	Procavia_capensis
ENSMICG00000004686	RRP1B	100	93.894	ENSPCOG00000017927	RRP1B	100	93.894	Propithecus_coquereli
ENSMICG00000004686	RRP1B	99	64.954	ENSPVAG00000001436	RRP1B	99	64.947	Pteropus_vampyrus
ENSMICG00000004686	RRP1B	100	63.505	ENSRNOG00000001194	Rrp1b	100	63.373	Rattus_norvegicus
ENSMICG00000004686	RRP1B	56	48.931	ENSRBIG00000032082	RRP1	80	51.444	Rhinopithecus_bieti
ENSMICG00000004686	RRP1B	100	73.684	ENSRBIG00000041689	RRP1B	100	73.553	Rhinopithecus_bieti
ENSMICG00000004686	RRP1B	56	48.931	ENSRROG00000039799	RRP1	80	51.444	Rhinopithecus_roxellana
ENSMICG00000004686	RRP1B	100	78.026	ENSRROG00000031499	RRP1B	100	77.895	Rhinopithecus_roxellana
ENSMICG00000004686	RRP1B	94	72.581	ENSSBOG00000034727	RRP1B	99	72.446	Saimiri_boliviensis_boliviensis
ENSMICG00000004686	RRP1B	51	46.597	ENSSBOG00000034689	RRP1	77	51.667	Saimiri_boliviensis_boliviensis
ENSMICG00000004686	RRP1B	100	65.052	ENSSHAG00000017789	RRP1B	100	64.921	Sarcophilus_harrisii
ENSMICG00000004686	RRP1B	66	48.462	ENSSMAG00000016847	-	88	45.924	Scophthalmus_maximus
ENSMICG00000004686	RRP1B	68	49.618	ENSSDUG00000000551	-	54	49.618	Seriola_dumerili
ENSMICG00000004686	RRP1B	68	49.618	ENSSLDG00000002538	-	54	49.618	Seriola_lalandi_dorsalis
ENSMICG00000004686	RRP1B	78	64.912	ENSSARG00000003108	-	78	64.912	Sorex_araneus
ENSMICG00000004686	RRP1B	81	58.876	ENSSPUG00000002834	RRP1B	100	45.812	Sphenodon_punctatus
ENSMICG00000004686	RRP1B	66	51.163	ENSSPAG00000005370	-	52	51.163	Stegastes_partitus
ENSMICG00000004686	RRP1B	100	63.454	ENSSSCG00000021698	RRP1B	100	64.439	Sus_scrofa
ENSMICG00000004686	RRP1B	66	48.113	ENSTNIG00000005053	rrp1	75	48.113	Tetraodon_nigroviridis
ENSMICG00000004686	RRP1B	80	86.095	ENSTBEG00000000422	RRP1B	100	86.095	Tupaia_belangeri
ENSMICG00000004686	RRP1B	100	67.838	ENSTTRG00000000723	RRP1B	100	67.550	Tursiops_truncatus
ENSMICG00000004686	RRP1B	100	70.040	ENSUAMG00000026765	RRP1B	100	70.850	Ursus_americanus
ENSMICG00000004686	RRP1B	51	46.277	ENSUMAG00000025507	RRP1	89	44.290	Ursus_maritimus
ENSMICG00000004686	RRP1B	69	82.486	ENSUMAG00000025510	RRP1B	93	82.486	Ursus_maritimus
ENSMICG00000004686	RRP1B	94	69.177	ENSVVUG00000024509	RRP1B	99	69.650	Vulpes_vulpes
ENSMICG00000004686	RRP1B	62	48.012	ENSXETG00000013683	rrp1b	66	48.012	Xenopus_tropicalis
ENSMICG00000004686	RRP1B	61	54.082	ENSXMAG00000023123	-	59	54.082	Xiphophorus_maculatus