EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000004700 (Gene tree)
Gene ID: 105879103
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 16725 bases
Position: chr31:44220797-44237521
Accession: 105879103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004281	Nop52	PF05997.12	2.5e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004698	RRP1-201	2869	XM_012779079	ENSMICP00000004281	440 (aa)	XP_012634533	UPI0006428D85

Gene Model

Click here to download ENSMICG00000004700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000004700	RRP1	84	51.444	ENSMICG00000004686	RRP1B	51	51.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004700	RRP1	96	48.214	ENSG00000160208	RRP1B	58	48.438	Homo_sapiens
ENSMICG00000004700	RRP1	99	74.732	ENSG00000160214	RRP1	98	97.727	Homo_sapiens
ENSMICG00000004700	RRP1	98	67.991	ENSAMEG00000011448	RRP1	98	68.874	Ailuropoda_melanoleuca
ENSMICG00000004700	RRP1	65	50.526	ENSACIG00000019121	rrp1	57	50.526	Amphilophus_citrinellus
ENSMICG00000004700	RRP1	78	51.170	ENSAOCG00000017894	-	75	51.734	Amphiprion_ocellaris
ENSMICG00000004700	RRP1	99	70.089	ENSANAG00000037815	RRP1	99	71.652	Aotus_nancymaae
ENSMICG00000004700	RRP1	99	63.415	ENSBTAG00000003981	RRP1	99	63.193	Bos_taurus
ENSMICG00000004700	RRP1	84	47.244	ENSBTAG00000017418	RRP1B	58	44.000	Bos_taurus
ENSMICG00000004700	RRP1	84	51.309	ENSCJAG00000017077	RRP1B	50	51.309	Callithrix_jacchus
ENSMICG00000004700	RRP1	93	75.227	ENSCJAG00000043205	RRP1	82	79.115	Callithrix_jacchus
ENSMICG00000004700	RRP1	78	48.767	ENSCAFG00000010621	RRP1B	50	48.767	Canis_familiaris
ENSMICG00000004700	RRP1	100	67.532	ENSCAFG00000010646	RRP1	100	67.749	Canis_familiaris
ENSMICG00000004700	RRP1	100	67.532	ENSCAFG00020018979	RRP1	100	67.749	Canis_lupus_dingo
ENSMICG00000004700	RRP1	86	49.257	ENSCAFG00020018901	RRP1B	53	49.257	Canis_lupus_dingo
ENSMICG00000004700	RRP1	99	63.193	ENSCHIG00000020948	RRP1	99	63.193	Capra_hircus
ENSMICG00000004700	RRP1	100	68.017	ENSTSYG00000012831	RRP1	100	70.065	Carlito_syrichta
ENSMICG00000004700	RRP1	83	62.087	ENSCAPG00000008576	RRP1	98	62.341	Cavia_aperea
ENSMICG00000004700	RRP1	78	49.296	ENSCPOG00000002396	RRP1B	58	44.725	Cavia_porcellus
ENSMICG00000004700	RRP1	98	66.813	ENSCPOG00000038986	RRP1	98	67.406	Cavia_porcellus
ENSMICG00000004700	RRP1	84	51.842	ENSCCAG00000029384	RRP1B	56	51.842	Cebus_capucinus
ENSMICG00000004700	RRP1	99	74.194	ENSCCAG00000029828	RRP1	99	73.978	Cebus_capucinus
ENSMICG00000004700	RRP1	99	72.805	ENSCATG00000015632	RRP1	99	76.026	Cercocebus_atys
ENSMICG00000004700	RRP1	99	67.609	ENSCLAG00000011639	RRP1	99	67.982	Chinchilla_lanigera
ENSMICG00000004700	RRP1	75	85.329	ENSCSAG00000007936	RRP1	100	85.329	Chlorocebus_sabaeus
ENSMICG00000004700	RRP1	75	42.433	ENSCHOG00000002426	-	54	42.433	Choloepus_hoffmanni
ENSMICG00000004700	RRP1	78	59.942	ENSCPBG00000010310	RRP1B	50	55.831	Chrysemys_picta_bellii
ENSMICG00000004700	RRP1	77	33.913	ENSCING00000003304	-	73	33.043	Ciona_intestinalis
ENSMICG00000004700	RRP1	88	50.750	ENSCANG00000040952	RRP1B	52	50.623	Colobus_angolensis_palliatus
ENSMICG00000004700	RRP1	89	73.604	ENSCANG00000042611	RRP1	84	73.604	Colobus_angolensis_palliatus
ENSMICG00000004700	RRP1	100	69.333	ENSCGRG00001011920	Rrp1	100	69.556	Cricetulus_griseus_chok1gshd
ENSMICG00000004700	RRP1	87	51.020	ENSCGRG00001023882	-	55	71.429	Cricetulus_griseus_chok1gshd
ENSMICG00000004700	RRP1	87	50.765	ENSCGRG00001010889	-	53	50.000	Cricetulus_griseus_chok1gshd
ENSMICG00000004700	RRP1	80	49.441	ENSCGRG00000001553	Rrp1b	50	48.641	Cricetulus_griseus_crigri
ENSMICG00000004700	RRP1	100	69.333	ENSCGRG00000008915	Rrp1	100	69.556	Cricetulus_griseus_crigri
ENSMICG00000004700	RRP1	78	49.714	ENSCSEG00000020711	-	64	49.714	Cynoglossus_semilaevis
ENSMICG00000004700	RRP1	88	43.257	ENSCVAG00000017568	-	88	46.779	Cyprinodon_variegatus
ENSMICG00000004700	RRP1	99	69.130	ENSDNOG00000019880	RRP1	99	69.130	Dasypus_novemcinctus
ENSMICG00000004700	RRP1	89	63.504	ENSDORG00000002104	Rrp1	99	63.923	Dipodomys_ordii
ENSMICG00000004700	RRP1	75	61.934	ENSETEG00000002963	-	73	61.310	Echinops_telfairi
ENSMICG00000004700	RRP1	98	69.488	ENSEASG00005001673	RRP1	100	71.018	Equus_asinus_asinus
ENSMICG00000004700	RRP1	98	69.933	ENSECAG00000015703	RRP1	100	71.460	Equus_caballus
ENSMICG00000004700	RRP1	98	42.634	ENSELUG00000015885	-	97	42.634	Esox_lucius
ENSMICG00000004700	RRP1	95	71.360	ENSFCAG00000008434	RRP1	97	70.495	Felis_catus
ENSMICG00000004700	RRP1	99	65.247	ENSFDAG00000013728	RRP1	99	65.919	Fukomys_damarensis
ENSMICG00000004700	RRP1	78	48.830	ENSGACG00000001438	rrp1	52	49.118	Gasterosteus_aculeatus
ENSMICG00000004700	RRP1	78	58.772	ENSGAGG00000000375	RRP1B	52	54.839	Gopherus_agassizii
ENSMICG00000004700	RRP1	98	74.249	ENSGGOG00000000173	RRP1	99	75.974	Gorilla_gorilla
ENSMICG00000004700	RRP1	96	48.214	ENSGGOG00000012069	RRP1B	58	48.438	Gorilla_gorilla
ENSMICG00000004700	RRP1	94	66.029	ENSHGLG00000017085	RRP1	95	65.929	Heterocephalus_glaber_female
ENSMICG00000004700	RRP1	88	46.465	ENSHGLG00000004968	RRP1B	59	45.926	Heterocephalus_glaber_female
ENSMICG00000004700	RRP1	77	41.429	ENSHGLG00100002232	RRP1B	53	40.860	Heterocephalus_glaber_male
ENSMICG00000004700	RRP1	77	44.568	ENSIPUG00000000673	-	67	45.676	Ictalurus_punctatus
ENSMICG00000004700	RRP1	76	52.857	ENSSTOG00000011790	RRP1B	53	51.020	Ictidomys_tridecemlineatus
ENSMICG00000004700	RRP1	94	70.698	ENSSTOG00000011116	RRP1	97	70.698	Ictidomys_tridecemlineatus
ENSMICG00000004700	RRP1	100	68.834	ENSJJAG00000018886	Rrp1	100	68.834	Jaculus_jaculus
ENSMICG00000004700	RRP1	76	46.821	ENSKMAG00000005539	rrp1	51	47.246	Kryptolebias_marmoratus
ENSMICG00000004700	RRP1	78	47.472	ENSLBEG00000021417	RRP1	89	47.191	Labrus_bergylta
ENSMICG00000004700	RRP1	90	51.244	ENSLAFG00000000766	RRP1B	95	51.232	Loxodonta_africana
ENSMICG00000004700	RRP1	99	63.877	ENSLAFG00000022901	RRP1	99	65.055	Loxodonta_africana
ENSMICG00000004700	RRP1	99	74.514	ENSMFAG00000003202	RRP1	99	75.594	Macaca_fascicularis
ENSMICG00000004700	RRP1	84	52.344	ENSMMUG00000000104	RRP1B	50	52.344	Macaca_mulatta
ENSMICG00000004700	RRP1	99	74.082	ENSMMUG00000012304	RRP1	99	75.162	Macaca_mulatta
ENSMICG00000004700	RRP1	99	75.594	ENSMNEG00000031210	RRP1	99	75.594	Macaca_nemestrina
ENSMICG00000004700	RRP1	90	71.495	ENSMLEG00000037797	RRP1	99	73.585	Mandrillus_leucophaeus
ENSMICG00000004700	RRP1	87	53.213	ENSMGAG00000014591	RRP1B	51	53.181	Meleagris_gallopavo
ENSMICG00000004700	RRP1	100	58.239	ENSMAUG00000017653	Rrp1	100	57.965	Mesocricetus_auratus
ENSMICG00000004700	RRP1	87	47.409	ENSMAUG00000021508	Rrp1b	52	46.465	Mesocricetus_auratus
ENSMICG00000004700	RRP1	100	55.464	ENSMOCG00000015687	Rrp1	100	55.464	Microtus_ochrogaster
ENSMICG00000004700	RRP1	81	45.706	ENSMMOG00000019175	rrp1	86	47.076	Mola_mola
ENSMICG00000004700	RRP1	98	54.646	ENSMODG00000021036	-	52	64.387	Monodelphis_domestica
ENSMICG00000004700	RRP1	78	48.127	ENSMALG00000010310	rrp1	88	48.127	Monopterus_albus
ENSMICG00000004700	RRP1	98	61.336	MGP_CAROLIEiJ_G0015508	Rrp1	98	62.041	Mus_caroli
ENSMICG00000004700	RRP1	75	50.751	MGP_CAROLIEiJ_G0021376	Rrp1b	53	68.254	Mus_caroli
ENSMICG00000004700	RRP1	75	51.952	ENSMUSG00000058392	Rrp1b	53	69.841	Mus_musculus
ENSMICG00000004700	RRP1	99	60.317	ENSMUSG00000061032	Rrp1	99	61.446	Mus_musculus
ENSMICG00000004700	RRP1	75	52.553	MGP_PahariEiJ_G0023695	Rrp1b	53	68.254	Mus_pahari
ENSMICG00000004700	RRP1	98	60.922	MGP_PahariEiJ_G0030921	Rrp1	99	62.020	Mus_pahari
ENSMICG00000004700	RRP1	99	79.762	MGP_SPRETEiJ_G0016321	Rrp1	99	61.122	Mus_spretus
ENSMICG00000004700	RRP1	75	51.952	MGP_SPRETEiJ_G0022290	Rrp1b	53	69.841	Mus_spretus
ENSMICG00000004700	RRP1	89	68.009	ENSMPUG00000009826	RRP1	96	65.823	Mustela_putorius_furo
ENSMICG00000004700	RRP1	88	88.646	ENSMLUG00000017788	RRP1	100	63.564	Myotis_lucifugus
ENSMICG00000004700	RRP1	97	51.867	ENSNGAG00000022344	Rrp1	99	52.282	Nannospalax_galili
ENSMICG00000004700	RRP1	84	52.356	ENSNLEG00000001490	RRP1B	51	52.356	Nomascus_leucogenys
ENSMICG00000004700	RRP1	99	74.304	ENSNLEG00000034734	RRP1	99	76.026	Nomascus_leucogenys
ENSMICG00000004700	RRP1	74	69.912	ENSMEUG00000003226	-	52	69.912	Notamacropus_eugenii
ENSMICG00000004700	RRP1	83	64.932	ENSOPRG00000001319	RRP1	97	68.627	Ochotona_princeps
ENSMICG00000004700	RRP1	88	49.622	ENSOANG00000006470	RRP1B	55	48.157	Ornithorhynchus_anatinus
ENSMICG00000004700	RRP1	76	62.722	ENSOANG00000006472	-	99	55.348	Ornithorhynchus_anatinus
ENSMICG00000004700	RRP1	80	55.635	ENSOCUG00000022843	-	99	56.280	Oryctolagus_cuniculus
ENSMICG00000004700	RRP1	86	50.649	ENSOGAG00000009872	RRP1B	58	50.649	Otolemur_garnettii
ENSMICG00000004700	RRP1	99	80.000	ENSOGAG00000006105	RRP1	99	80.000	Otolemur_garnettii
ENSMICG00000004700	RRP1	99	61.851	ENSOARG00000011434	RRP1	99	60.089	Ovis_aries
ENSMICG00000004700	RRP1	99	74.946	ENSPPAG00000029050	RRP1	99	76.458	Pan_paniscus
ENSMICG00000004700	RRP1	88	46.506	ENSPPAG00000035319	RRP1B	56	46.747	Pan_paniscus
ENSMICG00000004700	RRP1	95	70.000	ENSPPRG00000010656	RRP1	97	69.888	Panthera_pardus
ENSMICG00000004700	RRP1	85	60.104	ENSPTIG00000019473	RRP1	86	60.622	Panthera_tigris_altaica
ENSMICG00000004700	RRP1	99	74.732	ENSPTRG00000013962	RRP1	99	76.242	Pan_troglodytes
ENSMICG00000004700	RRP1	96	48.214	ENSPTRG00000013958	RRP1B	58	48.438	Pan_troglodytes
ENSMICG00000004700	RRP1	99	72.377	ENSPANG00000015097	RRP1	99	76.242	Papio_anubis
ENSMICG00000004700	RRP1	81	57.500	ENSPSIG00000008152	RRP1B	53	53.009	Pelodiscus_sinensis
ENSMICG00000004700	RRP1	78	39.437	ENSPMGG00000007512	-	84	40.000	Periophthalmus_magnuspinnatus
ENSMICG00000004700	RRP1	87	46.867	ENSPEMG00000022490	Rrp1b	54	45.708	Peromyscus_maniculatus_bairdii
ENSMICG00000004700	RRP1	100	68.315	ENSPEMG00000018421	Rrp1	100	69.042	Peromyscus_maniculatus_bairdii
ENSMICG00000004700	RRP1	84	52.604	ENSPCIG00000015513	RRP1B	53	52.551	Phascolarctos_cinereus
ENSMICG00000004700	RRP1	93	57.794	ENSPCIG00000015523	-	88	58.252	Phascolarctos_cinereus
ENSMICG00000004700	RRP1	78	50.571	ENSPLAG00000016684	-	59	45.244	Poecilia_latipinna
ENSMICG00000004700	RRP1	99	74.304	ENSPPYG00000011474	RRP1	99	75.594	Pongo_abelii
ENSMICG00000004700	RRP1	82	56.319	ENSPCAG00000008370	-	100	56.053	Procavia_capensis
ENSMICG00000004700	RRP1	100	83.519	ENSPCOG00000017706	RRP1	100	83.519	Propithecus_coquereli
ENSMICG00000004700	RRP1	84	51.706	ENSPCOG00000017927	RRP1B	51	51.706	Propithecus_coquereli
ENSMICG00000004700	RRP1	83	59.286	ENSPVAG00000009925	-	82	59.286	Pteropus_vampyrus
ENSMICG00000004700	RRP1	98	65.843	ENSRNOG00000001203	Rrp1	98	67.640	Rattus_norvegicus
ENSMICG00000004700	RRP1	99	72.222	ENSRBIG00000032082	RRP1	99	76.026	Rhinopithecus_bieti
ENSMICG00000004700	RRP1	99	72.436	ENSRROG00000039799	RRP1	99	76.458	Rhinopithecus_roxellana
ENSMICG00000004700	RRP1	84	52.344	ENSRROG00000031499	RRP1B	54	52.344	Rhinopithecus_roxellana
ENSMICG00000004700	RRP1	87	80.052	ENSSBOG00000034689	RRP1	99	72.707	Saimiri_boliviensis_boliviensis
ENSMICG00000004700	RRP1	75	60.000	ENSSHAG00000010304	-	100	60.542	Sarcophilus_harrisii
ENSMICG00000004700	RRP1	71	46.224	ENSSFOG00015003932	-	51	46.224	Scleropages_formosus
ENSMICG00000004700	RRP1	77	50.867	ENSSMAG00000016847	-	80	50.303	Scophthalmus_maximus
ENSMICG00000004700	RRP1	85	51.151	ENSSPUG00000002834	RRP1B	54	48.268	Sphenodon_punctatus
ENSMICG00000004700	RRP1	81	52.459	ENSSSCG00000021698	RRP1B	52	53.179	Sus_scrofa
ENSMICG00000004700	RRP1	98	66.886	ENSSSCG00000037061	RRP1	99	68.722	Sus_scrofa
ENSMICG00000004700	RRP1	78	50.435	ENSTRUG00000017592	rrp1	97	50.435	Takifugu_rubripes
ENSMICG00000004700	RRP1	97	43.213	ENSTNIG00000005053	rrp1	54	49.275	Tetraodon_nigroviridis
ENSMICG00000004700	RRP1	82	47.978	ENSTBEG00000000422	RRP1B	53	51.935	Tupaia_belangeri
ENSMICG00000004700	RRP1	64	76.129	ENSTBEG00000001260	-	60	75.862	Tupaia_belangeri
ENSMICG00000004700	RRP1	84	50.396	ENSTTRG00000000723	RRP1B	51	50.529	Tursiops_truncatus
ENSMICG00000004700	RRP1	84	73.529	ENSTTRG00000011162	RRP1	85	73.529	Tursiops_truncatus
ENSMICG00000004700	RRP1	71	58.507	ENSUAMG00000014189	-	97	58.806	Ursus_americanus
ENSMICG00000004700	RRP1	76	48.295	ENSUMAG00000025510	RRP1B	57	51.133	Ursus_maritimus
ENSMICG00000004700	RRP1	89	64.493	ENSUMAG00000025507	RRP1	98	64.122	Ursus_maritimus
ENSMICG00000004700	RRP1	78	48.361	ENSVVUG00000024509	RRP1B	50	48.361	Vulpes_vulpes
ENSMICG00000004700	RRP1	67	57.643	ENSVVUG00000024498	-	77	57.643	Vulpes_vulpes