EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000004710 (Gene tree)
Gene ID: 105883631
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 28977 bases
Position: chr4:35700416-35729392
Accession: 105883631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004327	ResIII	PF04851.15	8.4e-26	1	2
ENSMICP00000004327	ResIII	PF04851.15	8.4e-26	2	2
ENSMICP00000030010	ResIII	PF04851.15	1.3e-12	1	1
ENSMICP00000021910	ResIII	PF04851.15	3.2e-12	1	1
ENSMICP00000025821	ResIII	PF04851.15	1.5e-10	1	1
ENSMICP00000004327	DEAD	PF00270.29	4.9e-52	1	2
ENSMICP00000004327	DEAD	PF00270.29	4.9e-52	2	2
ENSMICP00000021910	DEAD	PF00270.29	5e-25	1	1
ENSMICP00000030010	DEAD	PF00270.29	5.8e-25	1	1
ENSMICP00000025821	DEAD	PF00270.29	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004748	SNRNP200-201	7126	XM_012786893	ENSMICP00000004327	2136 (aa)	XP_012642347	UPI000643DF3A
ENSMICT00000034760	SNRNP200-204	3009	-	ENSMICP00000021910	1002 (aa)	-	UPI000C2EC241
ENSMICT00000050806	SNRNP200-202	2073	-	ENSMICP00000025821	690 (aa)	-	UPI00085B3FC1
ENSMICT00000047920	SNRNP200-203	1089	-	ENSMICP00000030010	362 (aa)	-	UPI000C2EC4A6

Gene Model

Click here to download ENSMICG00000004710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000004710	SNRNP200	97	48.451	ENSMICG00000008861	ASCC3	81	44.706
ENSMICG00000004710	SNRNP200	74	31.196	ENSMICG00000037935	HFM1	58	31.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004710	SNRNP200	100	99.860	ENSG00000144028	SNRNP200	100	99.860	Homo_sapiens
ENSMICG00000004710	SNRNP200	99	90.935	ENSAPOG00000010223	snrnp200	99	90.824	Acanthochromis_polyacanthus
ENSMICG00000004710	SNRNP200	100	99.813	ENSAMEG00000008996	SNRNP200	100	99.813	Ailuropoda_melanoleuca
ENSMICG00000004710	SNRNP200	98	91.549	ENSACIG00000001764	snrnp200	98	90.310	Amphilophus_citrinellus
ENSMICG00000004710	SNRNP200	99	90.841	ENSAOCG00000024593	snrnp200	100	90.096	Amphiprion_ocellaris
ENSMICG00000004710	SNRNP200	98	91.831	ENSAPEG00000012554	snrnp200	100	90.150	Amphiprion_percula
ENSMICG00000004710	SNRNP200	99	90.700	ENSATEG00000022522	snrnp200	99	90.590	Anabas_testudineus
ENSMICG00000004710	SNRNP200	99	97.643	ENSAPLG00000004313	SNRNP200	100	97.643	Anas_platyrhynchos
ENSMICG00000004710	SNRNP200	99	97.555	ENSACAG00000000434	SNRNP200	100	97.555	Anolis_carolinensis
ENSMICG00000004710	SNRNP200	98	97.500	ENSANAG00000036625	SNRNP200	100	95.709	Aotus_nancymaae
ENSMICG00000004710	SNRNP200	99	90.559	ENSACLG00000011188	snrnp200	99	90.449	Astatotilapia_calliptera
ENSMICG00000004710	SNRNP200	98	92.394	ENSAMXG00000005684	snrnp200	99	90.449	Astyanax_mexicanus
ENSMICG00000004710	SNRNP200	100	99.251	ENSBTAG00000000848	SNRNP200	100	99.251	Bos_taurus
ENSMICG00000004710	SNRNP200	100	99.813	ENSCJAG00000007514	SNRNP200	100	99.813	Callithrix_jacchus
ENSMICG00000004710	SNRNP200	100	99.710	ENSCAFG00020019979	SNRNP200	100	99.942	Canis_lupus_dingo
ENSMICG00000004710	SNRNP200	100	99.438	ENSCHIG00000020611	SNRNP200	100	99.438	Capra_hircus
ENSMICG00000004710	SNRNP200	100	99.860	ENSTSYG00000010467	SNRNP200	100	99.860	Carlito_syrichta
ENSMICG00000004710	SNRNP200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSMICG00000004710	SNRNP200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSMICG00000004710	SNRNP200	100	99.813	ENSCCAG00000033962	SNRNP200	100	99.813	Cebus_capucinus
ENSMICG00000004710	SNRNP200	100	99.860	ENSCATG00000015790	SNRNP200	100	99.860	Cercocebus_atys
ENSMICG00000004710	SNRNP200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSMICG00000004710	SNRNP200	100	99.813	ENSCSAG00000017369	SNRNP200	100	99.813	Chlorocebus_sabaeus
ENSMICG00000004710	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSMICG00000004710	SNRNP200	100	97.803	ENSCPBG00000022571	SNRNP200	100	97.803	Chrysemys_picta_bellii
ENSMICG00000004710	SNRNP200	99	76.646	ENSCING00000005082	-	99	76.787	Ciona_intestinalis
ENSMICG00000004710	SNRNP200	98	98.873	ENSCANG00000033932	SNRNP200	100	99.801	Colobus_angolensis_palliatus
ENSMICG00000004710	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSMICG00000004710	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSMICG00000004710	SNRNP200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSMICG00000004710	SNRNP200	100	85.674	ENSCVAG00000017631	snrnp200	99	85.674	Cyprinodon_variegatus
ENSMICG00000004710	SNRNP200	100	90.309	ENSDARG00000077536	snrnp200	99	90.309	Danio_rerio
ENSMICG00000004710	SNRNP200	100	98.480	ENSDNOG00000011227	SNRNP200	100	98.221	Dasypus_novemcinctus
ENSMICG00000004710	SNRNP200	100	97.101	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSMICG00000004710	SNRNP200	100	74.302	FBgn0263599	l(3)72Ab	99	74.209	Drosophila_melanogaster
ENSMICG00000004710	SNRNP200	100	98.784	ENSETEG00000000162	SNRNP200	74	99.655	Echinops_telfairi
ENSMICG00000004710	SNRNP200	94	77.592	ENSEBUG00000016524	snrnp200	95	81.435	Eptatretus_burgeri
ENSMICG00000004710	SNRNP200	100	98.695	ENSEASG00005001884	SNRNP200	100	98.695	Equus_asinus_asinus
ENSMICG00000004710	SNRNP200	100	99.813	ENSECAG00000019675	SNRNP200	100	99.813	Equus_caballus
ENSMICG00000004710	SNRNP200	98	98.873	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMICG00000004710	SNRNP200	99	90.794	ENSELUG00000018948	snrnp200	99	90.684	Esox_lucius
ENSMICG00000004710	SNRNP200	100	99.860	ENSFCAG00000010699	SNRNP200	100	99.860	Felis_catus
ENSMICG00000004710	SNRNP200	98	97.183	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSMICG00000004710	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSMICG00000004710	SNRNP200	98	91.549	ENSFHEG00000003786	snrnp200	99	87.828	Fundulus_heteroclitus
ENSMICG00000004710	SNRNP200	100	89.626	ENSGMOG00000004881	snrnp200	99	89.579	Gadus_morhua
ENSMICG00000004710	SNRNP200	98	91.831	ENSGAFG00000010807	snrnp200	99	88.062	Gambusia_affinis
ENSMICG00000004710	SNRNP200	100	90.051	ENSGACG00000011474	snrnp200	99	89.958	Gasterosteus_aculeatus
ENSMICG00000004710	SNRNP200	98	97.465	ENSGAGG00000016069	SNRNP200	99	97.738	Gopherus_agassizii
ENSMICG00000004710	SNRNP200	100	99.860	ENSGGOG00000005174	SNRNP200	100	99.860	Gorilla_gorilla
ENSMICG00000004710	SNRNP200	98	91.268	ENSHBUG00000011322	snrnp200	99	87.880	Haplochromis_burtoni
ENSMICG00000004710	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSMICG00000004710	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSMICG00000004710	SNRNP200	50	81.556	ENSIPUG00000007770	-	89	81.525	Ictalurus_punctatus
ENSMICG00000004710	SNRNP200	100	99.813	ENSSTOG00000016351	SNRNP200	100	99.813	Ictidomys_tridecemlineatus
ENSMICG00000004710	SNRNP200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSMICG00000004710	SNRNP200	98	91.268	ENSKMAG00000003665	snrnp200	99	87.587	Kryptolebias_marmoratus
ENSMICG00000004710	SNRNP200	100	90.309	ENSLBEG00000021585	snrnp200	99	90.309	Labrus_bergylta
ENSMICG00000004710	SNRNP200	98	96.056	ENSLACG00000000226	SNRNP200	99	94.779	Latimeria_chalumnae
ENSMICG00000004710	SNRNP200	100	92.135	ENSLOCG00000015198	snrnp200	99	92.135	Lepisosteus_oculatus
ENSMICG00000004710	SNRNP200	100	99.438	ENSLAFG00000015626	SNRNP200	100	99.438	Loxodonta_africana
ENSMICG00000004710	SNRNP200	100	99.813	ENSMFAG00000040174	SNRNP200	100	99.813	Macaca_fascicularis
ENSMICG00000004710	SNRNP200	100	99.813	ENSMMUG00000023261	SNRNP200	100	99.813	Macaca_mulatta
ENSMICG00000004710	SNRNP200	100	99.766	ENSMNEG00000032398	SNRNP200	100	99.766	Macaca_nemestrina
ENSMICG00000004710	SNRNP200	100	99.860	ENSMLEG00000019083	SNRNP200	100	99.860	Mandrillus_leucophaeus
ENSMICG00000004710	SNRNP200	100	90.267	ENSMAMG00000007851	snrnp200	99	90.220	Mastacembelus_armatus
ENSMICG00000004710	SNRNP200	98	91.268	ENSMZEG00005010787	snrnp200	99	87.880	Maylandia_zebra
ENSMICG00000004710	SNRNP200	98	97.183	ENSMGAG00000001831	SNRNP200	100	97.194	Meleagris_gallopavo
ENSMICG00000004710	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSMICG00000004710	SNRNP200	100	97.191	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSMICG00000004710	SNRNP200	98	90.986	ENSMMOG00000014167	snrnp200	99	88.951	Mola_mola
ENSMICG00000004710	SNRNP200	100	99.017	ENSMODG00000008475	SNRNP200	100	99.017	Monodelphis_domestica
ENSMICG00000004710	SNRNP200	99	90.841	ENSMALG00000001973	snrnp200	99	90.730	Monopterus_albus
ENSMICG00000004710	SNRNP200	100	99.579	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.579	Mus_caroli
ENSMICG00000004710	SNRNP200	100	99.625	ENSMUSG00000003660	Snrnp200	100	99.625	Mus_musculus
ENSMICG00000004710	SNRNP200	100	99.672	MGP_PahariEiJ_G0025695	Snrnp200	100	99.672	Mus_pahari
ENSMICG00000004710	SNRNP200	100	99.625	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSMICG00000004710	SNRNP200	100	99.766	ENSMPUG00000008949	SNRNP200	100	99.766	Mustela_putorius_furo
ENSMICG00000004710	SNRNP200	100	99.112	ENSMLUG00000010493	SNRNP200	100	99.112	Myotis_lucifugus
ENSMICG00000004710	SNRNP200	100	95.412	ENSMLUG00000027511	-	100	95.412	Myotis_lucifugus
ENSMICG00000004710	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSMICG00000004710	SNRNP200	98	91.268	ENSNBRG00000017960	snrnp200	98	90.429	Neolamprologus_brichardi
ENSMICG00000004710	SNRNP200	100	98.328	ENSNLEG00000000025	SNRNP200	100	96.087	Nomascus_leucogenys
ENSMICG00000004710	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSMICG00000004710	SNRNP200	98	98.873	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSMICG00000004710	SNRNP200	100	99.532	ENSODEG00000008366	SNRNP200	100	99.532	Octodon_degus
ENSMICG00000004710	SNRNP200	99	90.559	ENSONIG00000010714	snrnp200	99	90.449	Oreochromis_niloticus
ENSMICG00000004710	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSMICG00000004710	SNRNP200	100	90.356	ENSORLG00000012286	snrnp200	100	90.356	Oryzias_latipes
ENSMICG00000004710	SNRNP200	100	90.403	ENSORLG00020004648	snrnp200	100	90.403	Oryzias_latipes_hni
ENSMICG00000004710	SNRNP200	100	90.356	ENSORLG00015019114	snrnp200	100	90.391	Oryzias_latipes_hsok
ENSMICG00000004710	SNRNP200	99	90.606	ENSOMEG00000011834	snrnp200	99	90.496	Oryzias_melastigma
ENSMICG00000004710	SNRNP200	100	99.860	ENSOGAG00000006879	SNRNP200	100	99.860	Otolemur_garnettii
ENSMICG00000004710	SNRNP200	100	98.784	ENSOARG00000013949	SNRNP200	100	98.409	Ovis_aries
ENSMICG00000004710	SNRNP200	100	99.860	ENSPPAG00000041559	SNRNP200	100	99.860	Pan_paniscus
ENSMICG00000004710	SNRNP200	100	99.860	ENSPPRG00000004435	SNRNP200	100	99.860	Panthera_pardus
ENSMICG00000004710	SNRNP200	100	99.391	ENSPTIG00000006380	SNRNP200	100	99.391	Panthera_tigris_altaica
ENSMICG00000004710	SNRNP200	100	99.860	ENSPTRG00000012230	SNRNP200	100	99.860	Pan_troglodytes
ENSMICG00000004710	SNRNP200	100	99.813	ENSPANG00000006017	SNRNP200	100	99.813	Papio_anubis
ENSMICG00000004710	SNRNP200	100	91.058	ENSPKIG00000014762	snrnp200	99	91.058	Paramormyrops_kingsleyae
ENSMICG00000004710	SNRNP200	100	97.269	ENSPSIG00000008580	SNRNP200	100	96.771	Pelodiscus_sinensis
ENSMICG00000004710	SNRNP200	100	98.841	ENSPEMG00000020700	-	100	99.234	Peromyscus_maniculatus_bairdii
ENSMICG00000004710	SNRNP200	100	99.017	ENSPCIG00000023050	SNRNP200	100	99.017	Phascolarctos_cinereus
ENSMICG00000004710	SNRNP200	100	90.407	ENSPFOG00000015110	snrnp200	99	90.407	Poecilia_formosa
ENSMICG00000004710	SNRNP200	98	91.831	ENSPLAG00000006711	snrnp200	99	90.275	Poecilia_latipinna
ENSMICG00000004710	SNRNP200	98	91.831	ENSPMEG00000021166	snrnp200	99	90.220	Poecilia_mexicana
ENSMICG00000004710	SNRNP200	100	90.496	ENSPREG00000008875	snrnp200	99	90.496	Poecilia_reticulata
ENSMICG00000004710	SNRNP200	100	99.860	ENSPPYG00000012068	SNRNP200	100	99.860	Pongo_abelii
ENSMICG00000004710	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSMICG00000004710	SNRNP200	100	99.953	ENSPCOG00000024608	SNRNP200	100	99.953	Propithecus_coquereli
ENSMICG00000004710	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSMICG00000004710	SNRNP200	98	90.986	ENSPNYG00000017476	snrnp200	99	85.948	Pundamilia_nyererei
ENSMICG00000004710	SNRNP200	98	90.141	ENSPNAG00000010998	snrnp200	99	86.049	Pygocentrus_nattereri
ENSMICG00000004710	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSMICG00000004710	SNRNP200	100	99.860	ENSRBIG00000044690	-	100	99.860	Rhinopithecus_bieti
ENSMICG00000004710	SNRNP200	100	99.860	ENSRROG00000037952	-	100	99.860	Rhinopithecus_roxellana
ENSMICG00000004710	SNRNP200	100	99.813	ENSSBOG00000035471	SNRNP200	100	99.813	Saimiri_boliviensis_boliviensis
ENSMICG00000004710	SNRNP200	98	98.592	ENSSHAG00000000758	SNRNP200	100	98.936	Sarcophilus_harrisii
ENSMICG00000004710	SNRNP200	98	92.676	ENSSFOG00015018826	snrnp200	99	91.479	Scleropages_formosus
ENSMICG00000004710	SNRNP200	98	91.549	ENSSMAG00000005463	snrnp200	99	90.403	Scophthalmus_maximus
ENSMICG00000004710	SNRNP200	99	90.794	ENSSDUG00000021410	snrnp200	99	90.684	Seriola_dumerili
ENSMICG00000004710	SNRNP200	99	90.747	ENSSLDG00000010884	snrnp200	99	90.637	Seriola_lalandi_dorsalis
ENSMICG00000004710	SNRNP200	95	98.660	ENSSARG00000010728	SNRNP200	96	98.660	Sorex_araneus
ENSMICG00000004710	SNRNP200	100	97.566	ENSSPUG00000003726	-	100	97.566	Sphenodon_punctatus
ENSMICG00000004710	SNRNP200	99	90.841	ENSSPAG00000001842	snrnp200	99	90.730	Stegastes_partitus
ENSMICG00000004710	SNRNP200	100	99.672	ENSSSCG00000008127	SNRNP200	100	99.672	Sus_scrofa
ENSMICG00000004710	SNRNP200	98	97.183	ENSTGUG00000014475	-	100	87.914	Taeniopygia_guttata
ENSMICG00000004710	SNRNP200	99	90.465	ENSTRUG00000001307	snrnp200	99	90.356	Takifugu_rubripes
ENSMICG00000004710	SNRNP200	100	85.992	ENSTNIG00000004320	snrnp200	100	85.992	Tetraodon_nigroviridis
ENSMICG00000004710	SNRNP200	82	99.495	ENSTBEG00000003329	-	67	99.495	Tupaia_belangeri
ENSMICG00000004710	SNRNP200	100	99.485	ENSTTRG00000004983	SNRNP200	100	99.485	Tursiops_truncatus
ENSMICG00000004710	SNRNP200	95	90.426	ENSUAMG00000008395	-	95	92.829	Ursus_americanus
ENSMICG00000004710	SNRNP200	100	99.860	ENSUMAG00000012385	SNRNP200	100	99.860	Ursus_maritimus
ENSMICG00000004710	SNRNP200	96	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSMICG00000004710	SNRNP200	100	99.710	ENSVVUG00000026247	SNRNP200	100	99.710	Vulpes_vulpes
ENSMICG00000004710	SNRNP200	100	94.390	ENSXETG00000001243	snrnp200	100	94.390	Xenopus_tropicalis
ENSMICG00000004710	SNRNP200	98	91.831	ENSXMAG00000002058	snrnp200	98	90.525	Xiphophorus_maculatus