EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004784 (Gene tree)
Gene ID: 105857476
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 76906 bases
Position: chr5:30337946-30414851
Accession: 105857476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000021923	Suf	PF05843.14	3.1e-84	1	1
ENSMICP00000004362	Suf	PF05843.14	1.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004784	CSTF3-203	2530	-	ENSMICP00000004362	625 (aa)	-	UPI000C2ED68D
ENSMICT00000026458	CSTF3-201	2154	XM_012739862	ENSMICP00000021923	717 (aa)	XP_012595316	UPI0006439413
ENSMICT00000033851	CSTF3-202	297	-	ENSMICP00000031182	99 (aa)	-	UPI00085AFA4C

Gene Model

Click here to download ENSMICG00000004784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004784	CSTF3	100	99.721	ENSG00000176102	CSTF3	100	100.000	Homo_sapiens
ENSMICG00000004784	CSTF3	100	91.365	ENSAPOG00000014054	cstf3	100	91.365	Acanthochromis_polyacanthus
ENSMICG00000004784	CSTF3	100	99.840	ENSAMEG00000007187	CSTF3	98	99.859	Ailuropoda_melanoleuca
ENSMICG00000004784	CSTF3	100	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSMICG00000004784	CSTF3	100	91.086	ENSAOCG00000010930	cstf3	100	91.086	Amphiprion_ocellaris
ENSMICG00000004784	CSTF3	100	91.086	ENSAPEG00000007903	cstf3	100	91.086	Amphiprion_percula
ENSMICG00000004784	CSTF3	100	91.360	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSMICG00000004784	CSTF3	100	97.760	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSMICG00000004784	CSTF3	100	95.520	ENSACAG00000002823	CSTF3	100	95.404	Anolis_carolinensis
ENSMICG00000004784	CSTF3	100	99.721	ENSANAG00000020699	CSTF3	100	99.721	Aotus_nancymaae
ENSMICG00000004784	CSTF3	100	91.040	ENSACLG00000007820	cstf3	100	91.086	Astatotilapia_calliptera
ENSMICG00000004784	CSTF3	100	92.160	ENSAMXG00000014198	cstf3	100	90.808	Astyanax_mexicanus
ENSMICG00000004784	CSTF3	100	99.721	ENSBTAG00000008617	CSTF3	100	99.721	Bos_taurus
ENSMICG00000004784	CSTF3	99	48.702	WBGene00006307	suf-1	99	49.452	Caenorhabditis_elegans
ENSMICG00000004784	CSTF3	100	99.721	ENSCJAG00000005533	CSTF3	100	99.721	Callithrix_jacchus
ENSMICG00000004784	CSTF3	100	99.680	ENSCAFG00000007264	CSTF3	100	99.582	Canis_familiaris
ENSMICG00000004784	CSTF3	100	99.680	ENSCAFG00020002715	CSTF3	99	99.718	Canis_lupus_dingo
ENSMICG00000004784	CSTF3	100	99.680	ENSCHIG00000016418	CSTF3	100	99.680	Capra_hircus
ENSMICG00000004784	CSTF3	100	99.200	ENSTSYG00000000451	CSTF3	100	99.295	Carlito_syrichta
ENSMICG00000004784	CSTF3	90	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSMICG00000004784	CSTF3	100	99.360	ENSCPOG00000005545	CSTF3	100	99.303	Cavia_porcellus
ENSMICG00000004784	CSTF3	100	99.721	ENSCCAG00000024790	CSTF3	100	99.721	Cebus_capucinus
ENSMICG00000004784	CSTF3	100	99.721	ENSCATG00000007080	CSTF3	100	99.721	Cercocebus_atys
ENSMICG00000004784	CSTF3	100	99.721	ENSCLAG00000016179	CSTF3	100	99.721	Chinchilla_lanigera
ENSMICG00000004784	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSMICG00000004784	CSTF3	100	97.600	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSMICG00000004784	CSTF3	100	62.243	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSMICG00000004784	CSTF3	100	61.792	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSMICG00000004784	CSTF3	100	99.721	ENSCANG00000035468	CSTF3	100	99.721	Colobus_angolensis_palliatus
ENSMICG00000004784	CSTF3	100	99.200	ENSCGRG00001014773	Cstf3	100	99.024	Cricetulus_griseus_chok1gshd
ENSMICG00000004784	CSTF3	100	99.200	ENSCGRG00000004142	Cstf3	100	99.024	Cricetulus_griseus_crigri
ENSMICG00000004784	CSTF3	100	90.795	ENSCSEG00000014283	cstf3	100	90.795	Cynoglossus_semilaevis
ENSMICG00000004784	CSTF3	100	90.251	ENSCVAG00000019739	cstf3	100	90.251	Cyprinodon_variegatus
ENSMICG00000004784	CSTF3	100	90.795	ENSDARG00000018904	cstf3	100	90.795	Danio_rerio
ENSMICG00000004784	CSTF3	100	99.520	ENSDNOG00000007366	CSTF3	99	99.020	Dasypus_novemcinctus
ENSMICG00000004784	CSTF3	100	92.480	ENSDORG00000005898	Cstf3	99	91.819	Dipodomys_ordii
ENSMICG00000004784	CSTF3	99	58.269	FBgn0003559	su(f)	98	57.418	Drosophila_melanogaster
ENSMICG00000004784	CSTF3	96	98.997	ENSETEG00000017097	CSTF3	90	93.925	Echinops_telfairi
ENSMICG00000004784	CSTF3	86	74.954	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSMICG00000004784	CSTF3	100	99.520	ENSEASG00005019884	CSTF3	100	99.571	Equus_asinus_asinus
ENSMICG00000004784	CSTF3	100	99.520	ENSECAG00000023338	CSTF3	100	99.571	Equus_caballus
ENSMICG00000004784	CSTF3	100	94.142	ENSEEUG00000015167	CSTF3	100	94.142	Erinaceus_europaeus
ENSMICG00000004784	CSTF3	100	89.400	ENSELUG00000023393	cstf3	100	89.400	Esox_lucius
ENSMICG00000004784	CSTF3	100	99.520	ENSFCAG00000030711	CSTF3	100	99.442	Felis_catus
ENSMICG00000004784	CSTF3	100	97.600	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSMICG00000004784	CSTF3	100	99.582	ENSFDAG00000012082	CSTF3	100	99.582	Fukomys_damarensis
ENSMICG00000004784	CSTF3	100	90.251	ENSFHEG00000020623	cstf3	100	90.251	Fundulus_heteroclitus
ENSMICG00000004784	CSTF3	100	89.297	ENSGMOG00000012275	cstf3	100	89.291	Gadus_morhua
ENSMICG00000004784	CSTF3	100	98.240	ENSGALG00000011685	CSTF3	100	98.050	Gallus_gallus
ENSMICG00000004784	CSTF3	100	90.720	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSMICG00000004784	CSTF3	100	90.251	ENSGACG00000015997	cstf3	100	90.251	Gasterosteus_aculeatus
ENSMICG00000004784	CSTF3	100	97.600	ENSGAGG00000006200	CSTF3	100	97.214	Gopherus_agassizii
ENSMICG00000004784	CSTF3	100	94.720	ENSGGOG00000026591	CSTF3	99	93.794	Gorilla_gorilla
ENSMICG00000004784	CSTF3	100	91.040	ENSHBUG00000016656	cstf3	100	91.086	Haplochromis_burtoni
ENSMICG00000004784	CSTF3	100	99.442	ENSHGLG00000017834	CSTF3	100	99.442	Heterocephalus_glaber_female
ENSMICG00000004784	CSTF3	100	99.442	ENSHGLG00100018042	CSTF3	100	99.442	Heterocephalus_glaber_male
ENSMICG00000004784	CSTF3	100	89.760	ENSHCOG00000015218	cstf3	100	88.579	Hippocampus_comes
ENSMICG00000004784	CSTF3	100	90.560	ENSIPUG00000013170	CSTF3	100	90.237	Ictalurus_punctatus
ENSMICG00000004784	CSTF3	100	99.721	ENSSTOG00000013306	CSTF3	100	99.721	Ictidomys_tridecemlineatus
ENSMICG00000004784	CSTF3	99	82.173	ENSJJAG00000018430	Cstf3	99	82.173	Jaculus_jaculus
ENSMICG00000004784	CSTF3	100	90.240	ENSKMAG00000010916	cstf3	100	89.833	Kryptolebias_marmoratus
ENSMICG00000004784	CSTF3	100	89.833	ENSLBEG00000002306	cstf3	100	89.833	Labrus_bergylta
ENSMICG00000004784	CSTF3	100	93.920	ENSLACG00000017296	CSTF3	100	93.863	Latimeria_chalumnae
ENSMICG00000004784	CSTF3	100	93.305	ENSLOCG00000004415	cstf3	100	93.305	Lepisosteus_oculatus
ENSMICG00000004784	CSTF3	100	99.360	ENSLAFG00000008712	CSTF3	100	99.303	Loxodonta_africana
ENSMICG00000004784	CSTF3	100	99.721	ENSMFAG00000029516	CSTF3	100	99.721	Macaca_fascicularis
ENSMICG00000004784	CSTF3	100	99.721	ENSMMUG00000002542	CSTF3	100	99.721	Macaca_mulatta
ENSMICG00000004784	CSTF3	100	99.721	ENSMNEG00000021807	CSTF3	100	99.721	Macaca_nemestrina
ENSMICG00000004784	CSTF3	100	99.721	ENSMLEG00000039594	CSTF3	100	99.721	Mandrillus_leucophaeus
ENSMICG00000004784	CSTF3	100	91.086	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSMICG00000004784	CSTF3	100	91.040	ENSMZEG00005012082	cstf3	100	91.086	Maylandia_zebra
ENSMICG00000004784	CSTF3	100	98.240	ENSMGAG00000001383	CSTF3	100	98.189	Meleagris_gallopavo
ENSMICG00000004784	CSTF3	100	99.040	ENSMAUG00000002487	Cstf3	100	98.884	Mesocricetus_auratus
ENSMICG00000004784	CSTF3	100	99.200	ENSMOCG00000017583	Cstf3	100	99.024	Microtus_ochrogaster
ENSMICG00000004784	CSTF3	100	90.400	ENSMMOG00000016026	cstf3	95	90.845	Mola_mola
ENSMICG00000004784	CSTF3	100	84.320	ENSMODG00000025205	-	100	83.821	Monodelphis_domestica
ENSMICG00000004784	CSTF3	100	98.466	ENSMODG00000009745	-	100	98.466	Monodelphis_domestica
ENSMICG00000004784	CSTF3	100	90.669	ENSMALG00000012050	cstf3	100	90.669	Monopterus_albus
ENSMICG00000004784	CSTF3	100	99.200	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.024	Mus_caroli
ENSMICG00000004784	CSTF3	100	99.200	ENSMUSG00000027176	Cstf3	100	99.024	Mus_musculus
ENSMICG00000004784	CSTF3	100	99.200	MGP_PahariEiJ_G0025464	Cstf3	100	99.024	Mus_pahari
ENSMICG00000004784	CSTF3	100	99.200	MGP_SPRETEiJ_G0024939	Cstf3	100	99.024	Mus_spretus
ENSMICG00000004784	CSTF3	100	99.840	ENSMPUG00000011457	CSTF3	100	99.721	Mustela_putorius_furo
ENSMICG00000004784	CSTF3	100	99.680	ENSMLUG00000003073	-	99	99.437	Myotis_lucifugus
ENSMICG00000004784	CSTF3	100	96.480	ENSMLUG00000026022	-	100	96.095	Myotis_lucifugus
ENSMICG00000004784	CSTF3	100	99.200	ENSNGAG00000010677	Cstf3	100	99.024	Nannospalax_galili
ENSMICG00000004784	CSTF3	100	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSMICG00000004784	CSTF3	100	99.721	ENSNLEG00000017901	CSTF3	100	99.721	Nomascus_leucogenys
ENSMICG00000004784	CSTF3	81	94.664	ENSMEUG00000005640	-	100	94.837	Notamacropus_eugenii
ENSMICG00000004784	CSTF3	67	97.333	ENSOPRG00000000199	-	67	97.333	Ochotona_princeps
ENSMICG00000004784	CSTF3	100	99.520	ENSODEG00000016737	-	100	99.442	Octodon_degus
ENSMICG00000004784	CSTF3	99	88.710	ENSODEG00000006311	-	97	86.950	Octodon_degus
ENSMICG00000004784	CSTF3	100	91.040	ENSONIG00000005563	cstf3	100	91.086	Oreochromis_niloticus
ENSMICG00000004784	CSTF3	100	97.448	ENSOANG00000015140	CSTF3	100	96.769	Ornithorhynchus_anatinus
ENSMICG00000004784	CSTF3	100	99.680	ENSOCUG00000015417	CSTF3	100	99.582	Oryctolagus_cuniculus
ENSMICG00000004784	CSTF3	100	90.656	ENSORLG00000009762	cstf3	100	90.656	Oryzias_latipes
ENSMICG00000004784	CSTF3	100	90.656	ENSORLG00020005540	cstf3	100	90.656	Oryzias_latipes_hni
ENSMICG00000004784	CSTF3	100	90.516	ENSORLG00015003551	cstf3	100	90.516	Oryzias_latipes_hsok
ENSMICG00000004784	CSTF3	100	90.098	ENSOMEG00000003848	cstf3	100	90.098	Oryzias_melastigma
ENSMICG00000004784	CSTF3	100	99.363	ENSOGAG00000010229	CSTF3	100	99.306	Otolemur_garnettii
ENSMICG00000004784	CSTF3	100	99.680	ENSOARG00000017271	CSTF3	99	99.533	Ovis_aries
ENSMICG00000004784	CSTF3	100	97.280	ENSPPAG00000027358	CSTF3	99	96.051	Pan_paniscus
ENSMICG00000004784	CSTF3	100	99.520	ENSPPRG00000016852	CSTF3	100	99.442	Panthera_pardus
ENSMICG00000004784	CSTF3	100	99.520	ENSPTIG00000008716	CSTF3	100	99.442	Panthera_tigris_altaica
ENSMICG00000004784	CSTF3	100	99.721	ENSPTRG00000003485	CSTF3	100	99.721	Pan_troglodytes
ENSMICG00000004784	CSTF3	100	99.721	ENSPANG00000013722	CSTF3	100	99.721	Papio_anubis
ENSMICG00000004784	CSTF3	100	92.190	ENSPKIG00000023648	cstf3	100	92.190	Paramormyrops_kingsleyae
ENSMICG00000004784	CSTF3	100	97.120	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSMICG00000004784	CSTF3	76	94.881	ENSPMGG00000000164	cstf3	99	94.881	Periophthalmus_magnuspinnatus
ENSMICG00000004784	CSTF3	100	99.040	ENSPEMG00000011481	Cstf3	100	98.884	Peromyscus_maniculatus_bairdii
ENSMICG00000004784	CSTF3	100	80.922	ENSPMAG00000007282	cstf3	99	80.197	Petromyzon_marinus
ENSMICG00000004784	CSTF3	100	81.310	ENSPCIG00000030419	-	90	81.616	Phascolarctos_cinereus
ENSMICG00000004784	CSTF3	100	97.920	ENSPCIG00000026406	-	100	97.920	Phascolarctos_cinereus
ENSMICG00000004784	CSTF3	100	90.880	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSMICG00000004784	CSTF3	100	90.880	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSMICG00000004784	CSTF3	100	90.880	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSMICG00000004784	CSTF3	100	90.880	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSMICG00000004784	CSTF3	100	99.721	ENSPPYG00000003375	CSTF3	100	99.721	Pongo_abelii
ENSMICG00000004784	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSMICG00000004784	CSTF3	100	95.840	ENSPCOG00000014417	CSTF3	100	94.840	Propithecus_coquereli
ENSMICG00000004784	CSTF3	100	95.200	ENSPVAG00000002350	CSTF3	100	94.282	Pteropus_vampyrus
ENSMICG00000004784	CSTF3	100	91.040	ENSPNYG00000018259	cstf3	100	91.086	Pundamilia_nyererei
ENSMICG00000004784	CSTF3	100	92.050	ENSPNAG00000020182	cstf3	100	92.050	Pygocentrus_nattereri
ENSMICG00000004784	CSTF3	100	98.880	ENSRNOG00000012089	Cstf3	100	98.880	Rattus_norvegicus
ENSMICG00000004784	CSTF3	100	99.680	ENSRBIG00000044258	CSTF3	100	99.680	Rhinopithecus_bieti
ENSMICG00000004784	CSTF3	100	99.721	ENSRROG00000043450	CSTF3	100	99.721	Rhinopithecus_roxellana
ENSMICG00000004784	CSTF3	100	99.721	ENSSBOG00000024764	CSTF3	100	99.721	Saimiri_boliviensis_boliviensis
ENSMICG00000004784	CSTF3	100	85.440	ENSSHAG00000003135	-	99	85.216	Sarcophilus_harrisii
ENSMICG00000004784	CSTF3	100	98.240	ENSSHAG00000018128	-	100	97.629	Sarcophilus_harrisii
ENSMICG00000004784	CSTF3	100	91.911	ENSSFOG00015022133	cstf3	100	91.911	Scleropages_formosus
ENSMICG00000004784	CSTF3	100	90.400	ENSSMAG00000002197	cstf3	100	90.251	Scophthalmus_maximus
ENSMICG00000004784	CSTF3	100	91.200	ENSSDUG00000020426	cstf3	100	91.086	Seriola_dumerili
ENSMICG00000004784	CSTF3	100	91.226	ENSSLDG00000025649	cstf3	100	91.226	Seriola_lalandi_dorsalis
ENSMICG00000004784	CSTF3	100	99.680	ENSSARG00000000391	CSTF3	100	99.582	Sorex_araneus
ENSMICG00000004784	CSTF3	100	96.800	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSMICG00000004784	CSTF3	100	91.226	ENSSPAG00000004958	cstf3	100	91.226	Stegastes_partitus
ENSMICG00000004784	CSTF3	100	99.520	ENSSSCG00000040954	CSTF3	100	99.022	Sus_scrofa
ENSMICG00000004784	CSTF3	100	97.600	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSMICG00000004784	CSTF3	100	89.760	ENSTRUG00000004959	cstf3	100	89.694	Takifugu_rubripes
ENSMICG00000004784	CSTF3	100	90.400	ENSTNIG00000013811	cstf3	99	90.704	Tetraodon_nigroviridis
ENSMICG00000004784	CSTF3	100	96.000	ENSTBEG00000001544	CSTF3	90	96.106	Tupaia_belangeri
ENSMICG00000004784	CSTF3	100	96.932	ENSTTRG00000016366	CSTF3	100	96.932	Tursiops_truncatus
ENSMICG00000004784	CSTF3	100	99.680	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSMICG00000004784	CSTF3	100	99.582	ENSVPAG00000007800	CSTF3	100	99.582	Vicugna_pacos
ENSMICG00000004784	CSTF3	100	99.680	ENSVVUG00000014938	CSTF3	100	99.680	Vulpes_vulpes
ENSMICG00000004784	CSTF3	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSMICG00000004784	CSTF3	97	80.813	ENSXETG00000021399	cstf3	100	80.906	Xenopus_tropicalis
ENSMICG00000004784	CSTF3	100	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSMICG00000004784	CSTF3	100	90.880	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus