EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004829 (Gene tree)
Gene ID: 105877028
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 33841 bases
Position: chr22:26907335-26941175
Accession: 105877028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004403	DUF1604	PF07713.13	3.1e-17	1	1
ENSMICP00000004403	G-patch	PF01585.23	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004832	GPATCH1-201	2670	XM_012775222	ENSMICP00000004403	889 (aa)	XP_012630676	UPI000C2EA707

Gene Model

Click here to download ENSMICG00000004829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004829	GPATCH1	93	80.919	ENSG00000076650	GPATCH1	90	80.212	Homo_sapiens
ENSMICG00000004829	GPATCH1	93	79.245	ENSAMEG00000015575	GPATCH1	90	78.538	Ailuropoda_melanoleuca
ENSMICG00000004829	GPATCH1	83	60.221	ENSAOCG00000006668	gpatch1	77	61.326	Amphiprion_ocellaris
ENSMICG00000004829	GPATCH1	83	49.285	ENSAPEG00000000026	gpatch1	99	45.842	Amphiprion_percula
ENSMICG00000004829	GPATCH1	92	45.125	ENSATEG00000014494	gpatch1	90	45.805	Anabas_testudineus
ENSMICG00000004829	GPATCH1	93	51.667	ENSAPLG00000007584	GPATCH1	96	52.989	Anas_platyrhynchos
ENSMICG00000004829	GPATCH1	93	80.565	ENSANAG00000027002	GPATCH1	90	79.859	Aotus_nancymaae
ENSMICG00000004829	GPATCH1	83	48.060	ENSACLG00000024740	gpatch1	82	48.364	Astatotilapia_calliptera
ENSMICG00000004829	GPATCH1	93	47.065	ENSAMXG00000020177	gpatch1	97	46.776	Astyanax_mexicanus
ENSMICG00000004829	GPATCH1	93	79.245	ENSBTAG00000000721	GPATCH1	90	78.538	Bos_taurus
ENSMICG00000004829	GPATCH1	93	79.741	ENSCJAG00000000684	GPATCH1	90	79.034	Callithrix_jacchus
ENSMICG00000004829	GPATCH1	93	79.505	ENSCAFG00000007457	GPATCH1	76	78.799	Canis_familiaris
ENSMICG00000004829	GPATCH1	93	79.505	ENSCAFG00020019731	GPATCH1	90	78.799	Canis_lupus_dingo
ENSMICG00000004829	GPATCH1	93	79.835	ENSCHIG00000019626	GPATCH1	100	75.546	Capra_hircus
ENSMICG00000004829	GPATCH1	90	70.652	ENSCAPG00000008827	GPATCH1	90	71.324	Cavia_aperea
ENSMICG00000004829	GPATCH1	93	74.122	ENSCPOG00000024477	GPATCH1	90	74.794	Cavia_porcellus
ENSMICG00000004829	GPATCH1	93	80.330	ENSCCAG00000024676	GPATCH1	90	79.623	Cebus_capucinus
ENSMICG00000004829	GPATCH1	93	81.037	ENSCATG00000043637	GPATCH1	90	80.448	Cercocebus_atys
ENSMICG00000004829	GPATCH1	92	72.110	ENSCLAG00000003395	-	91	73.844	Chinchilla_lanigera
ENSMICG00000004829	GPATCH1	93	78.471	ENSCSAG00000004743	GPATCH1	90	77.882	Chlorocebus_sabaeus
ENSMICG00000004829	GPATCH1	85	92.021	ENSCHOG00000012865	GPATCH1	96	73.589	Choloepus_hoffmanni
ENSMICG00000004829	GPATCH1	83	57.937	ENSCPBG00000000666	GPATCH1	92	60.437	Chrysemys_picta_bellii
ENSMICG00000004829	GPATCH1	87	84.062	ENSCANG00000012540	GPATCH1	89	82.188	Colobus_angolensis_palliatus
ENSMICG00000004829	GPATCH1	97	73.230	ENSCGRG00001016736	Gpatch1	90	75.091	Cricetulus_griseus_chok1gshd
ENSMICG00000004829	GPATCH1	79	74.863	ENSCGRG00000005069	Gpatch1	85	74.863	Cricetulus_griseus_crigri
ENSMICG00000004829	GPATCH1	80	44.695	ENSCSEG00000019456	-	89	44.695	Cynoglossus_semilaevis
ENSMICG00000004829	GPATCH1	93	45.475	ENSDARG00000033418	gpatch1	92	45.585	Danio_rerio
ENSMICG00000004829	GPATCH1	93	77.450	ENSDNOG00000005291	GPATCH1	94	76.860	Dasypus_novemcinctus
ENSMICG00000004829	GPATCH1	93	72.118	ENSDORG00000012546	Gpatch1	94	71.647	Dipodomys_ordii
ENSMICG00000004829	GPATCH1	93	67.609	ENSETEG00000003626	GPATCH1	91	67.256	Echinops_telfairi
ENSMICG00000004829	GPATCH1	96	34.486	ENSEBUG00000011286	gpatch1	91	35.334	Eptatretus_burgeri
ENSMICG00000004829	GPATCH1	94	78.438	ENSEASG00005021162	GPATCH1	100	77.451	Equus_asinus_asinus
ENSMICG00000004829	GPATCH1	93	79.245	ENSECAG00000022743	GPATCH1	87	79.009	Equus_caballus
ENSMICG00000004829	GPATCH1	76	68.627	ENSEEUG00000012925	GPATCH1	74	68.627	Erinaceus_europaeus
ENSMICG00000004829	GPATCH1	93	46.007	ENSELUG00000018195	gpatch1	90	46.007	Esox_lucius
ENSMICG00000004829	GPATCH1	93	79.717	ENSFCAG00000014917	GPATCH1	90	79.245	Felis_catus
ENSMICG00000004829	GPATCH1	95	54.944	ENSFALG00000007821	GPATCH1	90	55.376	Ficedula_albicollis
ENSMICG00000004829	GPATCH1	90	72.783	ENSFDAG00000003871	GPATCH1	91	73.512	Fukomys_damarensis
ENSMICG00000004829	GPATCH1	76	50.741	ENSGMOG00000003830	gpatch1	95	47.486	Gadus_morhua
ENSMICG00000004829	GPATCH1	96	55.242	ENSGALG00000004839	GPATCH1	93	56.140	Gallus_gallus
ENSMICG00000004829	GPATCH1	83	46.503	ENSGACG00000017544	gpatch1	93	44.678	Gasterosteus_aculeatus
ENSMICG00000004829	GPATCH1	93	57.625	ENSGAGG00000010067	GPATCH1	90	57.625	Gopherus_agassizii
ENSMICG00000004829	GPATCH1	91	80.192	ENSGGOG00000010862	GPATCH1	90	80.097	Gorilla_gorilla
ENSMICG00000004829	GPATCH1	83	48.060	ENSHBUG00000023462	gpatch1	90	46.197	Haplochromis_burtoni
ENSMICG00000004829	GPATCH1	93	75.147	ENSHGLG00000009334	GPATCH1	90	76.061	Heterocephalus_glaber_female
ENSMICG00000004829	GPATCH1	93	75.264	ENSHGLG00100018074	GPATCH1	90	76.179	Heterocephalus_glaber_male
ENSMICG00000004829	GPATCH1	96	47.420	ENSIPUG00000014977	gpatch1	90	47.941	Ictalurus_punctatus
ENSMICG00000004829	GPATCH1	93	77.974	ENSSTOG00000003720	GPATCH1	90	77.621	Ictidomys_tridecemlineatus
ENSMICG00000004829	GPATCH1	93	76.387	ENSJJAG00000023765	Gpatch1	90	76.505	Jaculus_jaculus
ENSMICG00000004829	GPATCH1	92	46.250	ENSKMAG00000017950	gpatch1	89	45.270	Kryptolebias_marmoratus
ENSMICG00000004829	GPATCH1	83	48.686	ENSLBEG00000026527	gpatch1	88	45.894	Labrus_bergylta
ENSMICG00000004829	GPATCH1	89	53.174	ENSLACG00000008130	GPATCH1	89	53.293	Latimeria_chalumnae
ENSMICG00000004829	GPATCH1	83	52.326	ENSLOCG00000001800	gpatch1	90	50.810	Lepisosteus_oculatus
ENSMICG00000004829	GPATCH1	93	78.774	ENSLAFG00000013589	GPATCH1	94	77.818	Loxodonta_africana
ENSMICG00000004829	GPATCH1	94	80.023	ENSMFAG00000034418	GPATCH1	96	79.535	Macaca_fascicularis
ENSMICG00000004829	GPATCH1	93	80.588	ENSMMUG00000011790	GPATCH1	91	80.000	Macaca_mulatta
ENSMICG00000004829	GPATCH1	93	80.330	ENSMNEG00000045084	GPATCH1	90	79.741	Macaca_nemestrina
ENSMICG00000004829	GPATCH1	81	89.286	ENSMLEG00000043840	GPATCH1	87	89.286	Mandrillus_leucophaeus
ENSMICG00000004829	GPATCH1	83	48.060	ENSMZEG00005001926	gpatch1	82	48.364	Maylandia_zebra
ENSMICG00000004829	GPATCH1	93	55.841	ENSMGAG00000005775	GPATCH1	90	55.699	Meleagris_gallopavo
ENSMICG00000004829	GPATCH1	93	76.436	ENSMOCG00000000174	Gpatch1	91	76.084	Microtus_ochrogaster
ENSMICG00000004829	GPATCH1	83	47.589	ENSMMOG00000002140	gpatch1	87	47.595	Mola_mola
ENSMICG00000004829	GPATCH1	93	66.471	ENSMODG00000012226	GPATCH1	89	66.235	Monodelphis_domestica
ENSMICG00000004829	GPATCH1	83	47.541	ENSMALG00000014386	gpatch1	90	45.558	Monopterus_albus
ENSMICG00000004829	GPATCH1	96	76.437	ENSMUSG00000063808	Gpatch1	95	77.005	Mus_musculus
ENSMICG00000004829	GPATCH1	96	76.261	MGP_PahariEiJ_G0012816	Gpatch1	95	76.824	Mus_pahari
ENSMICG00000004829	GPATCH1	96	76.322	MGP_SPRETEiJ_G0030681	Gpatch1	95	77.241	Mus_spretus
ENSMICG00000004829	GPATCH1	93	79.127	ENSMPUG00000007658	GPATCH1	90	78.538	Mustela_putorius_furo
ENSMICG00000004829	GPATCH1	93	78.420	ENSMLUG00000012161	GPATCH1	90	77.712	Myotis_lucifugus
ENSMICG00000004829	GPATCH1	93	76.651	ENSNGAG00000012455	Gpatch1	91	74.650	Nannospalax_galili
ENSMICG00000004829	GPATCH1	93	81.037	ENSNLEG00000007659	GPATCH1	90	80.330	Nomascus_leucogenys
ENSMICG00000004829	GPATCH1	69	66.134	ENSMEUG00000015174	GPATCH1	67	66.134	Notamacropus_eugenii
ENSMICG00000004829	GPATCH1	100	71.872	ENSODEG00000007103	GPATCH1	91	74.648	Octodon_degus
ENSMICG00000004829	GPATCH1	83	49.871	ENSONIG00000003302	gpatch1	91	47.327	Oreochromis_niloticus
ENSMICG00000004829	GPATCH1	99	61.853	ENSOANG00000012732	GPATCH1	90	63.905	Ornithorhynchus_anatinus
ENSMICG00000004829	GPATCH1	93	79.363	ENSOCUG00000015905	GPATCH1	90	79.481	Oryctolagus_cuniculus
ENSMICG00000004829	GPATCH1	82	45.312	ENSORLG00000018706	gpatch1	87	43.757	Oryzias_latipes
ENSMICG00000004829	GPATCH1	92	44.574	ENSOMEG00000022688	gpatch1	89	43.927	Oryzias_melastigma
ENSMICG00000004829	GPATCH1	86	80.922	ENSOGAG00000004016	GPATCH1	98	80.922	Otolemur_garnettii
ENSMICG00000004829	GPATCH1	92	79.667	ENSOARG00000004365	GPATCH1	90	78.954	Ovis_aries
ENSMICG00000004829	GPATCH1	93	80.683	ENSPPAG00000020990	GPATCH1	90	79.976	Pan_paniscus
ENSMICG00000004829	GPATCH1	93	79.953	ENSPPRG00000017245	GPATCH1	90	79.481	Panthera_pardus
ENSMICG00000004829	GPATCH1	93	80.425	ENSPTIG00000019649	GPATCH1	90	80.307	Panthera_tigris_altaica
ENSMICG00000004829	GPATCH1	93	80.801	ENSPTRG00000010803	GPATCH1	90	80.094	Pan_troglodytes
ENSMICG00000004829	GPATCH1	93	80.919	ENSPANG00000012374	GPATCH1	95	80.448	Papio_anubis
ENSMICG00000004829	GPATCH1	83	51.592	ENSPKIG00000020745	gpatch1	81	51.816	Paramormyrops_kingsleyae
ENSMICG00000004829	GPATCH1	92	57.329	ENSPSIG00000013433	GPATCH1	89	57.583	Pelodiscus_sinensis
ENSMICG00000004829	GPATCH1	93	76.415	ENSPEMG00000000636	Gpatch1	90	75.943	Peromyscus_maniculatus_bairdii
ENSMICG00000004829	GPATCH1	93	66.431	ENSPCIG00000021003	GPATCH1	95	65.960	Phascolarctos_cinereus
ENSMICG00000004829	GPATCH1	72	44.562	ENSPREG00000008264	gpatch1	97	40.307	Poecilia_reticulata
ENSMICG00000004829	GPATCH1	93	77.974	ENSPPYG00000009824	GPATCH1	90	77.267	Pongo_abelii
ENSMICG00000004829	GPATCH1	72	76.683	ENSPCAG00000005931	GPATCH1	78	72.917	Procavia_capensis
ENSMICG00000004829	GPATCH1	96	78.760	ENSPCOG00000009674	GPATCH1	97	78.855	Propithecus_coquereli
ENSMICG00000004829	GPATCH1	84	79.292	ENSPVAG00000017767	GPATCH1	81	88.462	Pteropus_vampyrus
ENSMICG00000004829	GPATCH1	83	48.241	ENSPNYG00000018189	gpatch1	92	48.540	Pundamilia_nyererei
ENSMICG00000004829	GPATCH1	94	46.926	ENSPNAG00000013187	gpatch1	92	47.001	Pygocentrus_nattereri
ENSMICG00000004829	GPATCH1	96	75.862	ENSRNOG00000011584	Gpatch1	90	76.415	Rattus_norvegicus
ENSMICG00000004829	GPATCH1	93	77.408	ENSRBIG00000034723	GPATCH1	91	76.694	Rhinopithecus_bieti
ENSMICG00000004829	GPATCH1	93	81.037	ENSRROG00000024428	GPATCH1	90	80.330	Rhinopithecus_roxellana
ENSMICG00000004829	GPATCH1	93	80.448	ENSSBOG00000034650	GPATCH1	90	79.741	Saimiri_boliviensis_boliviensis
ENSMICG00000004829	GPATCH1	93	66.471	ENSSHAG00000016016	GPATCH1	90	65.610	Sarcophilus_harrisii
ENSMICG00000004829	GPATCH1	83	50.128	ENSSFOG00015011535	gpatch1	89	48.851	Scleropages_formosus
ENSMICG00000004829	GPATCH1	83	44.200	ENSSMAG00000002883	gpatch1	93	41.901	Scophthalmus_maximus
ENSMICG00000004829	GPATCH1	83	47.708	ENSSDUG00000007444	gpatch1	89	45.212	Seriola_dumerili
ENSMICG00000004829	GPATCH1	83	46.790	ENSSLDG00000002856	gpatch1	92	46.411	Seriola_lalandi_dorsalis
ENSMICG00000004829	GPATCH1	74	75.740	ENSSARG00000004108	GPATCH1	72	75.740	Sorex_araneus
ENSMICG00000004829	GPATCH1	93	80.307	ENSSSCG00000002865	GPATCH1	93	79.717	Sus_scrofa
ENSMICG00000004829	GPATCH1	96	56.307	ENSTGUG00000009401	GPATCH1	91	55.841	Taeniopygia_guttata
ENSMICG00000004829	GPATCH1	83	45.974	ENSTRUG00000005785	-	90	43.423	Takifugu_rubripes
ENSMICG00000004829	GPATCH1	83	46.104	ENSTRUG00000025081	gpatch1	90	43.539	Takifugu_rubripes
ENSMICG00000004829	GPATCH1	82	47.497	ENSTNIG00000002554	gpatch1	96	48.387	Tetraodon_nigroviridis
ENSMICG00000004829	GPATCH1	58	100.000	ENSTBEG00000007750	-	72	100.000	Tupaia_belangeri
ENSMICG00000004829	GPATCH1	88	84.211	ENSTTRG00000012221	GPATCH1	90	75.501	Tursiops_truncatus
ENSMICG00000004829	GPATCH1	93	79.059	ENSUMAG00000014645	GPATCH1	96	78.439	Ursus_maritimus
ENSMICG00000004829	GPATCH1	78	83.429	ENSVPAG00000010313	GPATCH1	81	84.239	Vicugna_pacos
ENSMICG00000004829	GPATCH1	93	79.505	ENSVVUG00000016572	GPATCH1	90	78.799	Vulpes_vulpes
ENSMICG00000004829	GPATCH1	100	45.966	ENSXETG00000018276	gpatch1	93	50.066	Xenopus_tropicalis