EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004895 (Gene tree)
Gene ID: 105863131
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 3742 bases
Position: chr5:2012459-2016200
Accession: 105863131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000022653	Clp1	PF06807.14	2e-30	1	1
ENSMICP00000004460	Clp1	PF06807.14	2e-30	1	1
ENSMICP00000043572	Clp1	PF06807.14	5.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000064837	CLP1-203	2206	XM_012749911	ENSMICP00000043572	385 (aa)	XP_012605365	UPI00064327A5
ENSMICT00000053735	CLP1-202	2326	XM_012749910	ENSMICP00000022653	425 (aa)	XP_012605364	UPI00004BCCCE
ENSMICT00000004893	CLP1-201	1299	-	ENSMICP00000004460	432 (aa)	-	UPI00085B1E45

Gene Model

Click here to download ENSMICG00000004895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004895	CLP1	100	99.529	ENSG00000172409	CLP1	100	99.529	Homo_sapiens
ENSMICG00000004895	CLP1	98	76.651	ENSAPOG00000008242	clp1	99	74.943	Acanthochromis_polyacanthus
ENSMICG00000004895	CLP1	100	100.000	ENSAMEG00000014551	CLP1	99	100.000	Ailuropoda_melanoleuca
ENSMICG00000004895	CLP1	98	75.943	ENSACIG00000006310	clp1	99	74.260	Amphilophus_citrinellus
ENSMICG00000004895	CLP1	100	75.289	ENSAOCG00000010681	clp1	100	75.289	Amphiprion_ocellaris
ENSMICG00000004895	CLP1	98	76.651	ENSAPEG00000012165	clp1	99	76.651	Amphiprion_percula
ENSMICG00000004895	CLP1	99	76.102	ENSATEG00000012374	clp1	99	75.399	Anabas_testudineus
ENSMICG00000004895	CLP1	100	93.882	ENSACAG00000007139	CLP1	100	93.882	Anolis_carolinensis
ENSMICG00000004895	CLP1	100	99.529	ENSANAG00000034935	CLP1	100	99.529	Aotus_nancymaae
ENSMICG00000004895	CLP1	99	75.174	ENSACLG00000013573	clp1	99	74.487	Astatotilapia_calliptera
ENSMICG00000004895	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSMICG00000004895	CLP1	100	100.000	ENSBTAG00000006493	CLP1	100	100.000	Bos_taurus
ENSMICG00000004895	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSMICG00000004895	CLP1	100	99.529	ENSCJAG00000008748	CLP1	100	99.529	Callithrix_jacchus
ENSMICG00000004895	CLP1	100	100.000	ENSCAFG00000007815	CLP1	100	100.000	Canis_familiaris
ENSMICG00000004895	CLP1	100	100.000	ENSCAFG00020000903	CLP1	100	100.000	Canis_lupus_dingo
ENSMICG00000004895	CLP1	100	99.294	ENSCHIG00000023497	CLP1	100	99.294	Capra_hircus
ENSMICG00000004895	CLP1	100	99.529	ENSTSYG00000006824	CLP1	99	99.532	Carlito_syrichta
ENSMICG00000004895	CLP1	100	99.294	ENSCAPG00000009703	CLP1	100	99.294	Cavia_aperea
ENSMICG00000004895	CLP1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSMICG00000004895	CLP1	100	99.059	ENSCCAG00000031957	CLP1	100	99.059	Cebus_capucinus
ENSMICG00000004895	CLP1	100	99.529	ENSCATG00000044628	CLP1	100	99.529	Cercocebus_atys
ENSMICG00000004895	CLP1	100	99.765	ENSCLAG00000004094	CLP1	100	99.765	Chinchilla_lanigera
ENSMICG00000004895	CLP1	100	99.529	ENSCSAG00000005994	CLP1	100	99.529	Chlorocebus_sabaeus
ENSMICG00000004895	CLP1	100	94.353	ENSCPBG00000016843	CLP1	100	94.353	Chrysemys_picta_bellii
ENSMICG00000004895	CLP1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
ENSMICG00000004895	CLP1	99	63.033	ENSCSAVG00000003437	-	99	63.033	Ciona_savignyi
ENSMICG00000004895	CLP1	100	99.529	ENSCANG00000034335	CLP1	100	99.529	Colobus_angolensis_palliatus
ENSMICG00000004895	CLP1	100	99.294	ENSCGRG00001002227	CLP1	100	99.294	Cricetulus_griseus_chok1gshd
ENSMICG00000004895	CLP1	100	99.294	ENSCGRG00000004328	CLP1	100	99.294	Cricetulus_griseus_crigri
ENSMICG00000004895	CLP1	99	74.478	ENSCSEG00000008614	clp1	99	73.576	Cynoglossus_semilaevis
ENSMICG00000004895	CLP1	99	75.638	ENSCVAG00000020101	clp1	99	75.402	Cyprinodon_variegatus
ENSMICG00000004895	CLP1	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSMICG00000004895	CLP1	99	99.528	ENSDNOG00000042415	CLP1	90	99.529	Dasypus_novemcinctus
ENSMICG00000004895	CLP1	100	99.529	ENSDORG00000014685	Clp1	100	99.529	Dipodomys_ordii
ENSMICG00000004895	CLP1	96	56.796	FBgn0033842	cbc	97	56.796	Drosophila_melanogaster
ENSMICG00000004895	CLP1	100	99.765	ENSETEG00000003009	CLP1	100	99.765	Echinops_telfairi
ENSMICG00000004895	CLP1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
ENSMICG00000004895	CLP1	100	99.294	ENSEASG00005002093	CLP1	100	99.294	Equus_asinus_asinus
ENSMICG00000004895	CLP1	100	99.294	ENSECAG00000011597	CLP1	100	99.294	Equus_caballus
ENSMICG00000004895	CLP1	100	98.588	ENSEEUG00000012771	CLP1	100	98.588	Erinaceus_europaeus
ENSMICG00000004895	CLP1	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSMICG00000004895	CLP1	100	99.765	ENSFCAG00000006633	CLP1	100	99.765	Felis_catus
ENSMICG00000004895	CLP1	100	92.235	ENSFALG00000011145	CLP1	100	92.235	Ficedula_albicollis
ENSMICG00000004895	CLP1	100	99.765	ENSFDAG00000000234	CLP1	100	99.765	Fukomys_damarensis
ENSMICG00000004895	CLP1	99	74.942	ENSFHEG00000014760	CLP1	99	74.713	Fundulus_heteroclitus
ENSMICG00000004895	CLP1	97	79.665	ENSGMOG00000019340	clp1	99	77.294	Gadus_morhua
ENSMICG00000004895	CLP1	100	92.941	ENSGALG00000007370	CLP1	100	92.941	Gallus_gallus
ENSMICG00000004895	CLP1	99	75.406	ENSGAFG00000003020	clp1	99	75.406	Gambusia_affinis
ENSMICG00000004895	CLP1	99	76.566	ENSGACG00000017832	clp1	99	75.854	Gasterosteus_aculeatus
ENSMICG00000004895	CLP1	100	94.118	ENSGAGG00000013279	CLP1	100	94.118	Gopherus_agassizii
ENSMICG00000004895	CLP1	100	99.529	ENSGGOG00000023006	CLP1	100	99.529	Gorilla_gorilla
ENSMICG00000004895	CLP1	99	75.174	ENSHBUG00000010436	clp1	99	74.487	Haplochromis_burtoni
ENSMICG00000004895	CLP1	100	99.765	ENSHGLG00000009914	CLP1	100	99.765	Heterocephalus_glaber_female
ENSMICG00000004895	CLP1	100	99.765	ENSHGLG00100006105	CLP1	100	99.765	Heterocephalus_glaber_male
ENSMICG00000004895	CLP1	99	76.552	ENSHCOG00000010072	clp1	99	76.552	Hippocampus_comes
ENSMICG00000004895	CLP1	97	79.524	ENSIPUG00000016238	clp1	99	76.351	Ictalurus_punctatus
ENSMICG00000004895	CLP1	100	99.765	ENSSTOG00000029257	CLP1	100	99.765	Ictidomys_tridecemlineatus
ENSMICG00000004895	CLP1	100	99.294	ENSJJAG00000023691	Clp1	100	99.294	Jaculus_jaculus
ENSMICG00000004895	CLP1	99	74.942	ENSKMAG00000011990	clp1	99	74.260	Kryptolebias_marmoratus
ENSMICG00000004895	CLP1	99	76.334	ENSLBEG00000010201	clp1	99	75.626	Labrus_bergylta
ENSMICG00000004895	CLP1	100	85.412	ENSLACG00000003160	CLP1	100	85.412	Latimeria_chalumnae
ENSMICG00000004895	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSMICG00000004895	CLP1	100	99.529	ENSLAFG00000014907	CLP1	100	99.529	Loxodonta_africana
ENSMICG00000004895	CLP1	100	99.529	ENSMFAG00000046074	CLP1	100	99.529	Macaca_fascicularis
ENSMICG00000004895	CLP1	100	99.529	ENSMMUG00000038007	CLP1	99	99.529	Macaca_mulatta
ENSMICG00000004895	CLP1	100	99.529	ENSMNEG00000000259	CLP1	100	99.529	Macaca_nemestrina
ENSMICG00000004895	CLP1	100	99.529	ENSMLEG00000043556	CLP1	100	99.529	Mandrillus_leucophaeus
ENSMICG00000004895	CLP1	100	75.520	ENSMAMG00000002149	clp1	99	75.171	Mastacembelus_armatus
ENSMICG00000004895	CLP1	99	75.174	ENSMZEG00005002850	clp1	99	74.487	Maylandia_zebra
ENSMICG00000004895	CLP1	100	92.941	ENSMGAG00000009643	CLP1	100	92.941	Meleagris_gallopavo
ENSMICG00000004895	CLP1	100	98.588	ENSMAUG00000016261	Clp1	100	98.588	Mesocricetus_auratus
ENSMICG00000004895	CLP1	100	99.529	ENSMOCG00000005498	Clp1	100	99.529	Microtus_ochrogaster
ENSMICG00000004895	CLP1	98	78.066	ENSMMOG00000003229	clp1	98	76.728	Mola_mola
ENSMICG00000004895	CLP1	100	97.882	ENSMODG00000020107	-	100	97.882	Monodelphis_domestica
ENSMICG00000004895	CLP1	100	97.882	ENSMODG00000024148	-	100	97.882	Monodelphis_domestica
ENSMICG00000004895	CLP1	99	74.943	ENSMALG00000014239	clp1	99	74.943	Monopterus_albus
ENSMICG00000004895	CLP1	100	99.059	MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	Mus_caroli
ENSMICG00000004895	CLP1	100	99.059	ENSMUSG00000027079	Clp1	100	99.059	Mus_musculus
ENSMICG00000004895	CLP1	100	98.824	MGP_PahariEiJ_G0025177	Clp1	100	98.824	Mus_pahari
ENSMICG00000004895	CLP1	100	99.059	MGP_SPRETEiJ_G0024646	Clp1	100	99.059	Mus_spretus
ENSMICG00000004895	CLP1	100	100.000	ENSMPUG00000000268	CLP1	100	100.000	Mustela_putorius_furo
ENSMICG00000004895	CLP1	100	99.059	ENSMLUG00000007904	CLP1	100	99.059	Myotis_lucifugus
ENSMICG00000004895	CLP1	100	99.765	ENSNGAG00000006165	Clp1	100	99.765	Nannospalax_galili
ENSMICG00000004895	CLP1	99	75.174	ENSNBRG00000005225	clp1	99	74.487	Neolamprologus_brichardi
ENSMICG00000004895	CLP1	82	95.960	ENSNLEG00000012809	-	100	95.960	Nomascus_leucogenys
ENSMICG00000004895	CLP1	100	97.882	ENSMEUG00000010949	CLP1	100	97.887	Notamacropus_eugenii
ENSMICG00000004895	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSMICG00000004895	CLP1	100	99.765	ENSODEG00000011410	CLP1	100	99.765	Octodon_degus
ENSMICG00000004895	CLP1	99	74.942	ENSONIG00000005089	clp1	99	74.260	Oreochromis_niloticus
ENSMICG00000004895	CLP1	100	99.529	ENSOCUG00000007045	CLP1	100	99.529	Oryctolagus_cuniculus
ENSMICG00000004895	CLP1	99	74.478	ENSORLG00000003647	clp1	99	73.804	Oryzias_latipes
ENSMICG00000004895	CLP1	99	74.246	ENSORLG00020016676	clp1	99	73.576	Oryzias_latipes_hni
ENSMICG00000004895	CLP1	99	74.478	ENSORLG00015019484	clp1	99	73.804	Oryzias_latipes_hsok
ENSMICG00000004895	CLP1	99	74.942	ENSOMEG00000021303	clp1	99	74.260	Oryzias_melastigma
ENSMICG00000004895	CLP1	100	99.765	ENSOGAG00000004508	CLP1	100	99.765	Otolemur_garnettii
ENSMICG00000004895	CLP1	100	98.353	ENSOARG00000010145	CLP1	99	98.357	Ovis_aries
ENSMICG00000004895	CLP1	100	99.529	ENSPPAG00000041519	CLP1	100	99.529	Pan_paniscus
ENSMICG00000004895	CLP1	100	99.765	ENSPPRG00000006135	CLP1	100	99.765	Panthera_pardus
ENSMICG00000004895	CLP1	100	99.765	ENSPTIG00000015866	CLP1	100	99.765	Panthera_tigris_altaica
ENSMICG00000004895	CLP1	100	99.529	ENSPTRG00000047318	CLP1	100	99.529	Pan_troglodytes
ENSMICG00000004895	CLP1	100	99.529	ENSPANG00000017078	CLP1	100	98.165	Papio_anubis
ENSMICG00000004895	CLP1	97	80.387	ENSPKIG00000007697	clp1	99	77.523	Paramormyrops_kingsleyae
ENSMICG00000004895	CLP1	95	91.791	ENSPSIG00000005468	CLP1	100	91.791	Pelodiscus_sinensis
ENSMICG00000004895	CLP1	99	76.267	ENSPMGG00000012171	clp1	99	76.267	Periophthalmus_magnuspinnatus
ENSMICG00000004895	CLP1	100	99.529	ENSPEMG00000011213	-	100	99.529	Peromyscus_maniculatus_bairdii
ENSMICG00000004895	CLP1	100	76.056	ENSPMAG00000006707	clp1	100	76.056	Petromyzon_marinus
ENSMICG00000004895	CLP1	100	97.412	ENSPCIG00000011899	CLP1	99	97.412	Phascolarctos_cinereus
ENSMICG00000004895	CLP1	99	74.942	ENSPFOG00000008169	clp1	99	74.713	Poecilia_formosa
ENSMICG00000004895	CLP1	99	74.942	ENSPLAG00000022388	clp1	99	74.942	Poecilia_latipinna
ENSMICG00000004895	CLP1	99	74.942	ENSPMEG00000021088	clp1	99	74.942	Poecilia_mexicana
ENSMICG00000004895	CLP1	99	75.174	ENSPREG00000017802	clp1	99	74.943	Poecilia_reticulata
ENSMICG00000004895	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSMICG00000004895	CLP1	100	100.000	ENSPCOG00000000360	CLP1	99	100.000	Propithecus_coquereli
ENSMICG00000004895	CLP1	100	100.000	ENSPVAG00000016270	CLP1	100	100.000	Pteropus_vampyrus
ENSMICG00000004895	CLP1	99	75.174	ENSPNYG00000017274	clp1	99	74.487	Pundamilia_nyererei
ENSMICG00000004895	CLP1	97	80.238	ENSPNAG00000026460	clp1	99	77.652	Pygocentrus_nattereri
ENSMICG00000004895	CLP1	100	99.059	ENSRNOG00000007416	Clp1	100	99.059	Rattus_norvegicus
ENSMICG00000004895	CLP1	100	99.529	ENSRBIG00000018191	CLP1	100	99.529	Rhinopithecus_bieti
ENSMICG00000004895	CLP1	100	99.529	ENSRROG00000039265	CLP1	100	99.529	Rhinopithecus_roxellana
ENSMICG00000004895	CLP1	96	79.310	ENSSBOG00000010558	-	93	79.310	Saimiri_boliviensis_boliviensis
ENSMICG00000004895	CLP1	100	99.529	ENSSBOG00000032517	-	100	99.529	Saimiri_boliviensis_boliviensis
ENSMICG00000004895	CLP1	100	98.118	ENSSHAG00000015695	CLP1	100	98.118	Sarcophilus_harrisii
ENSMICG00000004895	CLP1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSMICG00000004895	CLP1	99	75.174	ENSSMAG00000019423	clp1	98	74.260	Scophthalmus_maximus
ENSMICG00000004895	CLP1	98	77.358	ENSSDUG00000014495	clp1	99	75.626	Seriola_dumerili
ENSMICG00000004895	CLP1	98	77.123	ENSSLDG00000000937	clp1	99	75.399	Seriola_lalandi_dorsalis
ENSMICG00000004895	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSMICG00000004895	CLP1	100	93.176	ENSSPUG00000016811	CLP1	100	93.176	Sphenodon_punctatus
ENSMICG00000004895	CLP1	98	76.179	ENSSPAG00000016052	clp1	99	74.487	Stegastes_partitus
ENSMICG00000004895	CLP1	100	100.000	ENSSSCG00000031442	CLP1	100	100.000	Sus_scrofa
ENSMICG00000004895	CLP1	100	92.000	ENSTGUG00000007002	CLP1	100	92.000	Taeniopygia_guttata
ENSMICG00000004895	CLP1	99	76.581	ENSTRUG00000012602	clp1	98	76.581	Takifugu_rubripes
ENSMICG00000004895	CLP1	99	76.112	ENSTNIG00000013125	clp1	98	76.112	Tetraodon_nigroviridis
ENSMICG00000004895	CLP1	100	98.824	ENSTBEG00000009975	CLP1	100	98.824	Tupaia_belangeri
ENSMICG00000004895	CLP1	100	99.529	ENSTTRG00000002096	CLP1	100	99.529	Tursiops_truncatus
ENSMICG00000004895	CLP1	100	100.000	ENSUAMG00000011388	CLP1	100	100.000	Ursus_americanus
ENSMICG00000004895	CLP1	100	100.000	ENSUMAG00000018317	CLP1	100	100.000	Ursus_maritimus
ENSMICG00000004895	CLP1	100	100.000	ENSVVUG00000017138	CLP1	97	100.000	Vulpes_vulpes
ENSMICG00000004895	CLP1	98	77.698	ENSXETG00000007088	clp1	95	78.417	Xenopus_tropicalis
ENSMICG00000004895	CLP1	99	75.174	ENSXCOG00000002287	clp1	99	74.943	Xiphophorus_couchianus
ENSMICG00000004895	CLP1	99	75.174	ENSXMAG00000009783	clp1	99	74.943	Xiphophorus_maculatus