EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004901 (Gene tree)
Gene ID: 105866171
Gene Symbol: RTL3
Alias: FLJ38865|Mar3|Mart3|SIRH9|ZCCHC5|ZHC5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 1437 bases
Position: chrX:8707263-8708699
Accession: 105866171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004464	zf-CCHC	PF00098.23	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004897	RTL3-201	1437	-	ENSMICP00000004464	478 (aa)	XP_012610819	UPI00064334A9

Gene Model

Click here to download ENSMICG00000004901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004901	RTL3	99	68.443	ENSG00000179300	RTL3	99	68.852	Homo_sapiens
ENSMICG00000004901	RTL3	100	66.116	ENSTSYG00000008776	RTL3	100	66.116	Carlito_syrichta
ENSMICG00000004901	RTL3	100	56.655	ENSCGRG00001015952	Rtl3	100	57.455	Cricetulus_griseus_chok1gshd
ENSMICG00000004901	RTL3	100	66.535	ENSDORG00000029995	Rtl3	100	66.139	Dipodomys_ordii
ENSMICG00000004901	RTL3	100	70.400	ENSECAG00000029496	RTL3	100	69.600	Equus_caballus
ENSMICG00000004901	RTL3	100	60.182	ENSSTOG00000027152	RTL3	100	59.889	Ictidomys_tridecemlineatus
ENSMICG00000004901	RTL3	100	58.835	ENSJJAG00000014790	-	100	58.058	Jaculus_jaculus
ENSMICG00000004901	RTL3	100	57.143	ENSMAUG00000011823	Rtl3	100	56.703	Mesocricetus_auratus
ENSMICG00000004901	RTL3	100	51.906	ENSMOCG00000017247	Rtl3	100	51.906	Microtus_ochrogaster
ENSMICG00000004901	RTL3	100	55.576	MGP_CAROLIEiJ_G0033333	Rtl3	100	55.576	Mus_caroli
ENSMICG00000004901	RTL3	100	55.160	ENSMUSG00000047686	Rtl3	100	54.562	Mus_musculus
ENSMICG00000004901	RTL3	100	53.203	MGP_PahariEiJ_G0031869	Rtl3	100	53.915	Mus_pahari
ENSMICG00000004901	RTL3	100	55.338	MGP_SPRETEiJ_G0034497	Rtl3	100	54.741	Mus_spretus
ENSMICG00000004901	RTL3	100	56.283	ENSNGAG00000002851	Rtl3	100	51.489	Nannospalax_galili
ENSMICG00000004901	RTL3	100	63.588	ENSOCUG00000025689	RTL3	100	58.970	Oryctolagus_cuniculus
ENSMICG00000004901	RTL3	100	83.162	ENSPCOG00000016711	RTL3	100	83.162	Propithecus_coquereli
ENSMICG00000004901	RTL3	100	53.915	ENSRNOG00000002429	Rtl3	100	53.805	Rattus_norvegicus
ENSMICG00000004901	RTL3	100	65.587	ENSTBEG00000002464	RTL3	100	64.777	Tupaia_belangeri