EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000005162 (Gene tree)
Gene ID: 105855983
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 190411 bases
Position: chr10:29216213-29406623
Accession: 105855983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000033694	ResIII	PF04851.15	5.4e-09	1	1
ENSMICP00000032532	ResIII	PF04851.15	5.8e-09	1	1
ENSMICP00000017383	ResIII	PF04851.15	6e-09	1	1
ENSMICP00000031727	ResIII	PF04851.15	3.5e-08	1	1
ENSMICP00000017678	ResIII	PF04851.15	3.5e-08	1	1
ENSMICP00000039824	ResIII	PF04851.15	3.5e-08	1	1
ENSMICP00000033232	ResIII	PF04851.15	3.6e-08	1	1
ENSMICP00000004717	ResIII	PF04851.15	3.6e-08	1	1
ENSMICP00000017383	BRK	PF07533.16	3e-17	1	1
ENSMICP00000032532	BRK	PF07533.16	3e-17	1	1
ENSMICP00000033694	BRK	PF07533.16	3.2e-17	1	1
ENSMICP00000033232	BRK	PF07533.16	3.2e-17	1	1
ENSMICP00000031727	BRK	PF07533.16	3.2e-17	1	1
ENSMICP00000004717	BRK	PF07533.16	3.2e-17	1	1
ENSMICP00000017678	BRK	PF07533.16	3.3e-17	1	1
ENSMICP00000039824	BRK	PF07533.16	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000035701	SMARCA2-205	4713	-	ENSMICP00000033232	1570 (aa)	-	UPI000C2EAA10
ENSMICT00000047209	SMARCA2-204	5815	XM_020289278	ENSMICP00000039824	1562 (aa)	XP_020144867	UPI000989B0E7
ENSMICT00000065515	SMARCA2-210	834	-	ENSMICP00000050228	278 (aa)	-	UPI000C2EBE7C
ENSMICT00000034817	SMARCA2-208	4320	-	ENSMICP00000032532	1439 (aa)	-	UPI000C2EB738
ENSMICT00000054973	SMARCA2-203	837	XM_020289286	ENSMICP00000028372	278 (aa)	XP_020144875	UPI000C2EA21F
ENSMICT00000039316	SMARCA2-206	4641	-	ENSMICP00000031727	1546 (aa)	-	UPI000C2ED109
ENSMICT00000046010	SMARCA2-207	4569	-	ENSMICP00000033694	1522 (aa)	-	UPI000C2EAFB1
ENSMICT00000031527	SMARCA2-209	4167	-	ENSMICP00000017383	1388 (aa)	-	UPI000C2EC93B
ENSMICT00000048273	SMARCA2-201	8784	XM_020289283	ENSMICP00000017678	1562 (aa)	XP_020144872	UPI000989B0E7
ENSMICT00000005173	SMARCA2-202	4743	XM_012737315	ENSMICP00000004717	1580 (aa)	XP_012592769	UPI00098B3226

Gene Model

Click here to download ENSMICG00000005162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000005162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000005162	SMARCA2	96	76.157	ENSMICG00000009806	SMARCA4	98	76.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000005162	SMARCA2	100	98.176	ENSG00000080503	SMARCA2	100	99.408	Homo_sapiens
ENSMICG00000005162	SMARCA2	100	80.716	ENSAPOG00000002641	SMARCA2	97	80.348	Acanthochromis_polyacanthus
ENSMICG00000005162	SMARCA2	99	89.372	ENSAMEG00000012325	SMARCA2	100	99.218	Ailuropoda_melanoleuca
ENSMICG00000005162	SMARCA2	100	80.189	ENSACIG00000015607	SMARCA2	97	80.259	Amphilophus_citrinellus
ENSMICG00000005162	SMARCA2	100	80.552	ENSAOCG00000009647	-	97	80.368	Amphiprion_ocellaris
ENSMICG00000005162	SMARCA2	100	80.590	ENSAPEG00000007646	SMARCA2	97	80.090	Amphiprion_percula
ENSMICG00000005162	SMARCA2	99	81.708	ENSATEG00000006916	SMARCA2	96	81.181	Anabas_testudineus
ENSMICG00000005162	SMARCA2	99	89.268	ENSAPLG00000013873	SMARCA2	93	90.234	Anas_platyrhynchos
ENSMICG00000005162	SMARCA2	100	90.851	ENSACAG00000002423	SMARCA2	100	90.211	Anolis_carolinensis
ENSMICG00000005162	SMARCA2	100	98.425	ENSANAG00000026498	SMARCA2	100	98.425	Aotus_nancymaae
ENSMICG00000005162	SMARCA2	100	81.373	ENSACLG00000004248	SMARCA2	97	81.539	Astatotilapia_calliptera
ENSMICG00000005162	SMARCA2	100	82.103	ENSAMXG00000012404	smarca2	97	82.920	Astyanax_mexicanus
ENSMICG00000005162	SMARCA2	100	98.015	ENSBTAG00000007494	SMARCA2	100	98.015	Bos_taurus
ENSMICG00000005162	SMARCA2	99	98.462	ENSCJAG00000010710	SMARCA2	100	97.238	Callithrix_jacchus
ENSMICG00000005162	SMARCA2	100	98.275	ENSCAFG00000002013	SMARCA2	100	98.275	Canis_familiaris
ENSMICG00000005162	SMARCA2	78	95.609	ENSCAFG00020026802	SMARCA2	98	95.609	Canis_lupus_dingo
ENSMICG00000005162	SMARCA2	100	98.038	ENSCHIG00000025863	SMARCA2	100	98.038	Capra_hircus
ENSMICG00000005162	SMARCA2	100	97.552	ENSTSYG00000003858	SMARCA2	100	97.489	Carlito_syrichta
ENSMICG00000005162	SMARCA2	99	92.771	ENSCAPG00000002890	SMARCA2	100	93.025	Cavia_aperea
ENSMICG00000005162	SMARCA2	100	97.134	ENSCPOG00000005475	SMARCA2	100	97.134	Cavia_porcellus
ENSMICG00000005162	SMARCA2	100	98.471	ENSCCAG00000030636	SMARCA2	100	98.471	Cebus_capucinus
ENSMICG00000005162	SMARCA2	100	98.215	ENSCATG00000031470	SMARCA2	100	98.215	Cercocebus_atys
ENSMICG00000005162	SMARCA2	100	96.698	ENSCLAG00000014484	SMARCA2	100	96.571	Chinchilla_lanigera
ENSMICG00000005162	SMARCA2	99	97.262	ENSCSAG00000008650	SMARCA2	99	98.294	Chlorocebus_sabaeus
ENSMICG00000005162	SMARCA2	87	94.792	ENSCHOG00000004316	SMARCA2	87	94.792	Choloepus_hoffmanni
ENSMICG00000005162	SMARCA2	100	92.239	ENSCPBG00000025463	SMARCA2	100	92.176	Chrysemys_picta_bellii
ENSMICG00000005162	SMARCA2	100	98.675	ENSCANG00000039597	SMARCA2	100	98.675	Colobus_angolensis_palliatus
ENSMICG00000005162	SMARCA2	100	89.371	ENSCGRG00001002323	Smarca2	100	89.404	Cricetulus_griseus_chok1gshd
ENSMICG00000005162	SMARCA2	99	78.185	ENSCSEG00000019311	SMARCA2	97	78.178	Cynoglossus_semilaevis
ENSMICG00000005162	SMARCA2	94	79.522	ENSCVAG00000016571	SMARCA2	95	79.939	Cyprinodon_variegatus
ENSMICG00000005162	SMARCA2	100	82.231	ENSDARG00000008904	smarca2	97	82.456	Danio_rerio
ENSMICG00000005162	SMARCA2	100	96.899	ENSDNOG00000006402	SMARCA2	100	96.899	Dasypus_novemcinctus
ENSMICG00000005162	SMARCA2	100	97.294	ENSDORG00000014832	Smarca2	100	97.294	Dipodomys_ordii
ENSMICG00000005162	SMARCA2	81	60.170	FBgn0000212	brm	90	51.849	Drosophila_melanogaster
ENSMICG00000005162	SMARCA2	86	62.995	ENSEBUG00000002449	-	95	64.161	Eptatretus_burgeri
ENSMICG00000005162	SMARCA2	98	73.551	ENSEBUG00000011442	-	94	71.756	Eptatretus_burgeri
ENSMICG00000005162	SMARCA2	100	97.829	ENSEASG00005010312	SMARCA2	100	97.829	Equus_asinus_asinus
ENSMICG00000005162	SMARCA2	67	100.000	ENSEEUG00000015540	-	69	100.000	Erinaceus_europaeus
ENSMICG00000005162	SMARCA2	97	78.694	ENSELUG00000010318	smarca2	96	79.444	Esox_lucius
ENSMICG00000005162	SMARCA2	100	97.700	ENSFCAG00000001568	SMARCA2	100	97.700	Felis_catus
ENSMICG00000005162	SMARCA2	100	92.112	ENSFALG00000010416	SMARCA2	100	92.397	Ficedula_albicollis
ENSMICG00000005162	SMARCA2	99	95.817	ENSFDAG00000010502	SMARCA2	99	95.799	Fukomys_damarensis
ENSMICG00000005162	SMARCA2	100	80.905	ENSFHEG00000021250	SMARCA2	97	80.155	Fundulus_heteroclitus
ENSMICG00000005162	SMARCA2	98	78.131	ENSGMOG00000014229	SMARCA2	97	78.227	Gadus_morhua
ENSMICG00000005162	SMARCA2	100	92.875	ENSGALG00000010164	SMARCA2	100	91.858	Gallus_gallus
ENSMICG00000005162	SMARCA2	94	79.354	ENSGAFG00000001164	SMARCA2	93	76.619	Gambusia_affinis
ENSMICG00000005162	SMARCA2	99	80.000	ENSGACG00000014488	SMARCA2	97	79.053	Gasterosteus_aculeatus
ENSMICG00000005162	SMARCA2	100	92.303	ENSGAGG00000024412	SMARCA2	100	92.112	Gopherus_agassizii
ENSMICG00000005162	SMARCA2	100	93.746	ENSGGOG00000000513	SMARCA2	100	94.062	Gorilla_gorilla
ENSMICG00000005162	SMARCA2	100	80.627	ENSHBUG00000006691	SMARCA2	96	81.508	Haplochromis_burtoni
ENSMICG00000005162	SMARCA2	99	95.860	ENSHGLG00000005215	SMARCA2	99	95.796	Heterocephalus_glaber_female
ENSMICG00000005162	SMARCA2	100	96.481	ENSHGLG00100010496	SMARCA2	100	96.481	Heterocephalus_glaber_male
ENSMICG00000005162	SMARCA2	99	74.910	ENSHCOG00000015348	-	88	86.733	Hippocampus_comes
ENSMICG00000005162	SMARCA2	100	81.062	ENSIPUG00000011060	smarca2	97	81.013	Ictalurus_punctatus
ENSMICG00000005162	SMARCA2	100	97.613	ENSSTOG00000006812	SMARCA2	100	97.613	Ictidomys_tridecemlineatus
ENSMICG00000005162	SMARCA2	100	97.390	ENSJJAG00000010867	Smarca2	100	97.390	Jaculus_jaculus
ENSMICG00000005162	SMARCA2	100	80.050	ENSKMAG00000015844	-	98	79.669	Kryptolebias_marmoratus
ENSMICG00000005162	SMARCA2	54	73.217	ENSLACG00000000270	SMARCA2	57	87.212	Latimeria_chalumnae
ENSMICG00000005162	SMARCA2	98	84.069	ENSLOCG00000011499	smarca2	97	83.578	Lepisosteus_oculatus
ENSMICG00000005162	SMARCA2	100	95.268	ENSLAFG00000014061	SMARCA2	100	95.214	Loxodonta_africana
ENSMICG00000005162	SMARCA2	100	96.910	ENSMFAG00000003814	SMARCA2	100	96.910	Macaca_fascicularis
ENSMICG00000005162	SMARCA2	100	98.613	ENSMMUG00000015279	SMARCA2	100	98.613	Macaca_mulatta
ENSMICG00000005162	SMARCA2	100	97.985	ENSMNEG00000041069	SMARCA2	100	97.985	Macaca_nemestrina
ENSMICG00000005162	SMARCA2	100	95.773	ENSMLEG00000027418	SMARCA2	100	95.773	Mandrillus_leucophaeus
ENSMICG00000005162	SMARCA2	100	80.659	ENSMAMG00000003056	SMARCA2	97	82.172	Mastacembelus_armatus
ENSMICG00000005162	SMARCA2	100	80.716	ENSMZEG00005020709	SMARCA2	96	81.669	Maylandia_zebra
ENSMICG00000005162	SMARCA2	85	76.096	ENSMGAG00000005160	-	100	76.494	Meleagris_gallopavo
ENSMICG00000005162	SMARCA2	100	96.692	ENSMOCG00000001611	Smarca2	100	96.692	Microtus_ochrogaster
ENSMICG00000005162	SMARCA2	99	79.184	ENSMMOG00000014196	SMARCA2	97	79.006	Mola_mola
ENSMICG00000005162	SMARCA2	100	93.003	ENSMODG00000003578	SMARCA2	100	92.607	Monodelphis_domestica
ENSMICG00000005162	SMARCA2	99	81.589	ENSMALG00000009611	SMARCA2	97	81.250	Monopterus_albus
ENSMICG00000005162	SMARCA2	100	95.818	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.920	Mus_caroli
ENSMICG00000005162	SMARCA2	100	95.452	ENSMUSG00000024921	Smarca2	99	98.883	Mus_musculus
ENSMICG00000005162	SMARCA2	100	96.073	MGP_PahariEiJ_G0014334	Smarca2	100	96.137	Mus_pahari
ENSMICG00000005162	SMARCA2	100	95.202	MGP_SPRETEiJ_G0023759	Smarca2	99	97.951	Mus_spretus
ENSMICG00000005162	SMARCA2	81	99.063	ENSMPUG00000005171	SMARCA2	94	99.063	Mustela_putorius_furo
ENSMICG00000005162	SMARCA2	99	91.384	ENSMLUG00000002342	SMARCA2	99	91.034	Myotis_lucifugus
ENSMICG00000005162	SMARCA2	99	96.078	ENSNGAG00000000108	Smarca2	99	96.078	Nannospalax_galili
ENSMICG00000005162	SMARCA2	95	70.395	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSMICG00000005162	SMARCA2	100	95.211	ENSNLEG00000008575	SMARCA2	100	95.211	Nomascus_leucogenys
ENSMICG00000005162	SMARCA2	99	88.431	ENSMEUG00000009812	SMARCA2	100	86.013	Notamacropus_eugenii
ENSMICG00000005162	SMARCA2	100	90.938	ENSOPRG00000013474	SMARCA2	100	91.065	Ochotona_princeps
ENSMICG00000005162	SMARCA2	99	96.352	ENSODEG00000005452	SMARCA2	99	96.352	Octodon_degus
ENSMICG00000005162	SMARCA2	99	80.643	ENSONIG00000014163	SMARCA2	97	79.706	Oreochromis_niloticus
ENSMICG00000005162	SMARCA2	55	92.811	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSMICG00000005162	SMARCA2	100	96.960	ENSOCUG00000006320	SMARCA2	100	96.960	Oryctolagus_cuniculus
ENSMICG00000005162	SMARCA2	100	79.661	ENSORLG00000020820	SMARCA2	100	79.141	Oryzias_latipes
ENSMICG00000005162	SMARCA2	100	79.774	ENSORLG00015006289	SMARCA2	97	89.669	Oryzias_latipes_hsok
ENSMICG00000005162	SMARCA2	99	81.214	ENSOMEG00000009736	-	97	80.287	Oryzias_melastigma
ENSMICG00000005162	SMARCA2	99	95.794	ENSOGAG00000017053	SMARCA2	99	95.794	Otolemur_garnettii
ENSMICG00000005162	SMARCA2	100	96.358	ENSOARG00000013265	SMARCA2	100	96.358	Ovis_aries
ENSMICG00000005162	SMARCA2	100	95.346	ENSPPAG00000038717	SMARCA2	100	95.346	Pan_paniscus
ENSMICG00000005162	SMARCA2	100	97.764	ENSPPRG00000001879	SMARCA2	100	97.764	Panthera_pardus
ENSMICG00000005162	SMARCA2	100	96.985	ENSPTRG00000051168	SMARCA2	100	96.985	Pan_troglodytes
ENSMICG00000005162	SMARCA2	100	91.006	ENSPANG00000025121	SMARCA2	100	91.195	Papio_anubis
ENSMICG00000005162	SMARCA2	100	83.376	ENSPKIG00000018469	-	100	82.981	Paramormyrops_kingsleyae
ENSMICG00000005162	SMARCA2	100	91.810	ENSPSIG00000006284	SMARCA2	100	91.429	Pelodiscus_sinensis
ENSMICG00000005162	SMARCA2	99	75.957	ENSPMGG00000013696	-	97	74.967	Periophthalmus_magnuspinnatus
ENSMICG00000005162	SMARCA2	100	96.168	ENSPEMG00000019821	Smarca2	100	96.168	Peromyscus_maniculatus_bairdii
ENSMICG00000005162	SMARCA2	50	80.280	ENSPMAG00000001030	-	100	81.538	Petromyzon_marinus
ENSMICG00000005162	SMARCA2	99	72.123	ENSPMAG00000005337	-	94	72.727	Petromyzon_marinus
ENSMICG00000005162	SMARCA2	100	94.814	ENSPCIG00000015658	SMARCA2	100	94.814	Phascolarctos_cinereus
ENSMICG00000005162	SMARCA2	100	80.125	ENSPFOG00000001856	SMARCA2	97	79.159	Poecilia_formosa
ENSMICG00000005162	SMARCA2	99	80.025	ENSPLAG00000017829	SMARCA2	96	78.301	Poecilia_latipinna
ENSMICG00000005162	SMARCA2	99	80.076	ENSPMEG00000001815	-	97	77.258	Poecilia_mexicana
ENSMICG00000005162	SMARCA2	100	79.627	ENSPREG00000013800	SMARCA2	96	77.915	Poecilia_reticulata
ENSMICG00000005162	SMARCA2	100	97.959	ENSPPYG00000019258	SMARCA2	100	97.959	Pongo_abelii
ENSMICG00000005162	SMARCA2	79	87.645	ENSPCAG00000016969	SMARCA2	78	87.645	Procavia_capensis
ENSMICG00000005162	SMARCA2	100	97.345	ENSPCOG00000025709	SMARCA2	100	97.345	Propithecus_coquereli
ENSMICG00000005162	SMARCA2	91	99.474	ENSPVAG00000000901	SMARCA2	95	99.474	Pteropus_vampyrus
ENSMICG00000005162	SMARCA2	100	77.750	ENSPNYG00000004533	SMARCA2	97	77.432	Pundamilia_nyererei
ENSMICG00000005162	SMARCA2	99	83.291	ENSPNAG00000014635	smarca2	96	83.496	Pygocentrus_nattereri
ENSMICG00000005162	SMARCA2	100	95.930	ENSRNOG00000011931	Smarca2	100	95.930	Rattus_norvegicus
ENSMICG00000005162	SMARCA2	100	96.171	ENSRBIG00000038618	SMARCA2	100	96.171	Rhinopithecus_bieti
ENSMICG00000005162	SMARCA2	100	97.413	ENSRROG00000019271	SMARCA2	100	97.413	Rhinopithecus_roxellana
ENSMICG00000005162	SMARCA2	100	95.350	ENSSBOG00000034827	SMARCA2	100	95.350	Saimiri_boliviensis_boliviensis
ENSMICG00000005162	SMARCA2	100	93.575	ENSSHAG00000007884	SMARCA2	100	91.855	Sarcophilus_harrisii
ENSMICG00000005162	SMARCA2	99	85.126	ENSSFOG00015014870	SMARCA2	97	85.981	Scleropages_formosus
ENSMICG00000005162	SMARCA2	100	81.250	ENSSMAG00000013707	SMARCA2	97	81.088	Scophthalmus_maximus
ENSMICG00000005162	SMARCA2	99	81.206	ENSSDUG00000008852	-	96	81.319	Seriola_dumerili
ENSMICG00000005162	SMARCA2	99	80.740	ENSSLDG00000025449	SMARCA2	96	80.390	Seriola_lalandi_dorsalis
ENSMICG00000005162	SMARCA2	95	97.895	ENSSARG00000007888	SMARCA2	95	97.895	Sorex_araneus
ENSMICG00000005162	SMARCA2	95	86.728	ENSSPUG00000001629	SMARCA2	98	86.465	Sphenodon_punctatus
ENSMICG00000005162	SMARCA2	100	80.702	ENSSPAG00000020091	-	97	80.077	Stegastes_partitus
ENSMICG00000005162	SMARCA2	100	97.911	ENSSSCG00000005232	SMARCA2	100	97.911	Sus_scrofa
ENSMICG00000005162	SMARCA2	100	90.776	ENSTGUG00000005460	SMARCA2	100	90.267	Taeniopygia_guttata
ENSMICG00000005162	SMARCA2	99	79.848	ENSTRUG00000015619	SMARCA2	97	79.820	Takifugu_rubripes
ENSMICG00000005162	SMARCA2	72	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSMICG00000005162	SMARCA2	99	95.777	ENSTTRG00000002033	SMARCA2	100	94.374	Tursiops_truncatus
ENSMICG00000005162	SMARCA2	99	94.505	ENSUAMG00000024701	SMARCA2	99	95.549	Ursus_americanus
ENSMICG00000005162	SMARCA2	92	88.300	ENSVPAG00000001204	SMARCA2	100	88.300	Vicugna_pacos
ENSMICG00000005162	SMARCA2	77	95.663	ENSVVUG00000004598	SMARCA2	99	95.663	Vulpes_vulpes
ENSMICG00000005162	SMARCA2	100	83.168	ENSXETG00000015299	smarca2	100	82.671	Xenopus_tropicalis
ENSMICG00000005162	SMARCA2	99	78.805	ENSXCOG00000011073	SMARCA2	97	79.942	Xiphophorus_couchianus
ENSMICG00000005162	SMARCA2	100	79.479	ENSXMAG00000015611	SMARCA2	99	75.665	Xiphophorus_maculatus