EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000005256 (Gene tree)
Gene ID: 105880120
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 64081 bases
Position: chr31:32736225-32800305
Accession: 105880120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000034266	RRM_1	PF00076.22	3.2e-09	1	1
ENSMICP00000004795	RRM_1	PF00076.22	3.7e-09	1	1
ENSMICP00000018371	RRM_1	PF00076.22	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000050013	SCAF4-201	4209	XM_012780918	ENSMICP00000018371	1142 (aa)	XP_012636372	UPI000642EB2A
ENSMICT00000043196	SCAF4-202	3384	-	ENSMICP00000034266	1127 (aa)	-	UPI000C2EB05E
ENSMICT00000005261	SCAF4-203	3351	-	ENSMICP00000004795	1116 (aa)	-	UPI000C2EA3F6

Gene Model

Click here to download ENSMICG00000005256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000005256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000005256	SCAF4	100	96.949	ENSG00000156304	SCAF4	100	96.949	Homo_sapiens
ENSMICG00000005256	SCAF4	54	59.184	ENSAPOG00000019615	scaf4b	63	61.905	Acanthochromis_polyacanthus
ENSMICG00000005256	SCAF4	74	93.720	ENSAMEG00000014987	SCAF4	97	94.111	Ailuropoda_melanoleuca
ENSMICG00000005256	SCAF4	69	56.693	ENSAOCG00000000615	scaf4a	55	59.939	Amphiprion_ocellaris
ENSMICG00000005256	SCAF4	69	56.693	ENSAPEG00000021229	scaf4a	55	59.788	Amphiprion_percula
ENSMICG00000005256	SCAF4	51	56.800	ENSATEG00000011758	scaf4b	54	72.222	Anabas_testudineus
ENSMICG00000005256	SCAF4	99	76.262	ENSAPLG00000002509	SCAF4	59	84.507	Anas_platyrhynchos
ENSMICG00000005256	SCAF4	96	69.930	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSMICG00000005256	SCAF4	100	96.777	ENSANAG00000037494	SCAF4	100	96.777	Aotus_nancymaae
ENSMICG00000005256	SCAF4	93	50.415	ENSAMXG00000008585	scaf4a	59	64.196	Astyanax_mexicanus
ENSMICG00000005256	SCAF4	100	93.362	ENSBTAG00000018855	SCAF4	100	93.275	Bos_taurus
ENSMICG00000005256	SCAF4	100	96.606	ENSCJAG00000008993	SCAF4	99	97.719	Callithrix_jacchus
ENSMICG00000005256	SCAF4	99	95.062	ENSCAFG00000008863	SCAF4	99	95.062	Canis_familiaris
ENSMICG00000005256	SCAF4	99	92.021	ENSCAFG00020026019	SCAF4	100	94.554	Canis_lupus_dingo
ENSMICG00000005256	SCAF4	100	92.776	ENSCHIG00000008385	SCAF4	100	91.906	Capra_hircus
ENSMICG00000005256	SCAF4	92	97.235	ENSTSYG00000011344	SCAF4	99	97.235	Carlito_syrichta
ENSMICG00000005256	SCAF4	100	89.301	ENSCPOG00000012443	SCAF4	100	90.078	Cavia_porcellus
ENSMICG00000005256	SCAF4	100	97.031	ENSCCAG00000033727	SCAF4	100	97.031	Cebus_capucinus
ENSMICG00000005256	SCAF4	100	96.441	ENSCATG00000030379	SCAF4	100	96.441	Cercocebus_atys
ENSMICG00000005256	SCAF4	99	90.877	ENSCLAG00000006298	SCAF4	100	90.964	Chinchilla_lanigera
ENSMICG00000005256	SCAF4	100	96.264	ENSCSAG00000009438	SCAF4	100	96.264	Chlorocebus_sabaeus
ENSMICG00000005256	SCAF4	100	96.946	ENSCANG00000029847	SCAF4	100	96.946	Colobus_angolensis_palliatus
ENSMICG00000005256	SCAF4	99	82.475	ENSCGRG00001020821	Scaf4	99	87.004	Cricetulus_griseus_chok1gshd
ENSMICG00000005256	SCAF4	99	82.182	ENSCGRG00000014360	Scaf4	99	86.715	Cricetulus_griseus_crigri
ENSMICG00000005256	SCAF4	58	55.631	ENSCSEG00000012808	-	61	60.500	Cynoglossus_semilaevis
ENSMICG00000005256	SCAF4	79	53.070	ENSCSEG00000019549	scaf4a	52	57.143	Cynoglossus_semilaevis
ENSMICG00000005256	SCAF4	100	90.639	ENSDNOG00000019014	SCAF4	94	90.989	Dasypus_novemcinctus
ENSMICG00000005256	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSMICG00000005256	SCAF4	100	95.717	ENSEASG00005007756	SCAF4	100	95.717	Equus_asinus_asinus
ENSMICG00000005256	SCAF4	100	95.804	ENSECAG00000014248	SCAF4	100	95.804	Equus_caballus
ENSMICG00000005256	SCAF4	59	52.862	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSMICG00000005256	SCAF4	100	93.206	ENSFCAG00000002228	SCAF4	100	93.554	Felis_catus
ENSMICG00000005256	SCAF4	99	89.974	ENSFDAG00000017780	SCAF4	100	89.888	Fukomys_damarensis
ENSMICG00000005256	SCAF4	100	76.629	ENSGALG00000033965	SCAF4	59	83.333	Gallus_gallus
ENSMICG00000005256	SCAF4	70	54.684	ENSGACG00000020580	scaf4a	54	70.122	Gasterosteus_aculeatus
ENSMICG00000005256	SCAF4	91	93.939	ENSGGOG00000015557	SCAF4	100	97.256	Gorilla_gorilla
ENSMICG00000005256	SCAF4	100	91.357	ENSHGLG00000010582	SCAF4	100	91.962	Heterocephalus_glaber_female
ENSMICG00000005256	SCAF4	99	91.251	ENSHGLG00100009441	SCAF4	100	91.864	Heterocephalus_glaber_male
ENSMICG00000005256	SCAF4	69	50.459	ENSIPUG00000011285	scaf4	62	64.207	Ictalurus_punctatus
ENSMICG00000005256	SCAF4	99	88.214	ENSSTOG00000004450	SCAF4	100	88.482	Ictidomys_tridecemlineatus
ENSMICG00000005256	SCAF4	100	89.929	ENSJJAG00000019447	Scaf4	99	90.371	Jaculus_jaculus
ENSMICG00000005256	SCAF4	97	61.478	ENSLACG00000013913	SCAF4	59	69.558	Latimeria_chalumnae
ENSMICG00000005256	SCAF4	95	58.401	ENSLOCG00000009162	scaf4a	58	68.576	Lepisosteus_oculatus
ENSMICG00000005256	SCAF4	99	95.368	ENSLAFG00000010710	SCAF4	100	92.707	Loxodonta_africana
ENSMICG00000005256	SCAF4	100	96.190	ENSMFAG00000037668	SCAF4	100	96.190	Macaca_fascicularis
ENSMICG00000005256	SCAF4	100	96.104	ENSMMUG00000001712	SCAF4	100	96.104	Macaca_mulatta
ENSMICG00000005256	SCAF4	100	96.107	ENSMNEG00000032966	SCAF4	100	96.107	Macaca_nemestrina
ENSMICG00000005256	SCAF4	99	96.413	ENSMLEG00000039674	SCAF4	100	96.413	Mandrillus_leucophaeus
ENSMICG00000005256	SCAF4	99	76.882	ENSMGAG00000014515	SCAF4	59	84.013	Meleagris_gallopavo
ENSMICG00000005256	SCAF4	99	89.046	ENSMAUG00000013307	Scaf4	100	88.417	Mesocricetus_auratus
ENSMICG00000005256	SCAF4	100	86.261	ENSMOCG00000012087	Scaf4	99	87.560	Microtus_ochrogaster
ENSMICG00000005256	SCAF4	100	84.978	ENSMODG00000021040	SCAF4	99	85.331	Monodelphis_domestica
ENSMICG00000005256	SCAF4	100	83.905	MGP_CAROLIEiJ_G0020944	Scaf4	100	86.412	Mus_caroli
ENSMICG00000005256	SCAF4	100	83.115	ENSMUSG00000022983	Scaf4	100	86.211	Mus_musculus
ENSMICG00000005256	SCAF4	100	82.372	MGP_PahariEiJ_G0016649	Scaf4	99	85.604	Mus_pahari
ENSMICG00000005256	SCAF4	100	84.059	MGP_SPRETEiJ_G0021850	Scaf4	100	86.811	Mus_spretus
ENSMICG00000005256	SCAF4	100	92.108	ENSMPUG00000001078	SCAF4	100	91.934	Mustela_putorius_furo
ENSMICG00000005256	SCAF4	99	77.193	ENSMLUG00000011472	SCAF4	79	82.736	Myotis_lucifugus
ENSMICG00000005256	SCAF4	99	91.821	ENSNGAG00000005214	Scaf4	99	91.667	Nannospalax_galili
ENSMICG00000005256	SCAF4	100	97.036	ENSNLEG00000003569	SCAF4	100	97.036	Nomascus_leucogenys
ENSMICG00000005256	SCAF4	85	90.217	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSMICG00000005256	SCAF4	100	89.289	ENSODEG00000002718	SCAF4	100	89.203	Octodon_degus
ENSMICG00000005256	SCAF4	71	59.126	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSMICG00000005256	SCAF4	100	88.571	ENSOCUG00000008336	SCAF4	100	88.918	Oryctolagus_cuniculus
ENSMICG00000005256	SCAF4	99	91.876	ENSOGAG00000014653	SCAF4	94	96.081	Otolemur_garnettii
ENSMICG00000005256	SCAF4	99	92.200	ENSOARG00000013894	SCAF4	99	91.282	Ovis_aries
ENSMICG00000005256	SCAF4	100	96.949	ENSPPAG00000028535	SCAF4	100	96.949	Pan_paniscus
ENSMICG00000005256	SCAF4	99	93.574	ENSPPRG00000000635	SCAF4	100	93.926	Panthera_pardus
ENSMICG00000005256	SCAF4	100	92.164	ENSPTIG00000021578	SCAF4	99	90.417	Panthera_tigris_altaica
ENSMICG00000005256	SCAF4	100	96.949	ENSPTRG00000013848	SCAF4	100	96.949	Pan_troglodytes
ENSMICG00000005256	SCAF4	100	96.277	ENSPANG00000017332	SCAF4	100	96.277	Papio_anubis
ENSMICG00000005256	SCAF4	64	64.729	ENSPKIG00000022408	scaf4a	90	66.916	Paramormyrops_kingsleyae
ENSMICG00000005256	SCAF4	99	78.304	ENSPSIG00000014242	SCAF4	57	86.603	Pelodiscus_sinensis
ENSMICG00000005256	SCAF4	61	88.774	ENSPCIG00000028183	SCAF4	91	83.662	Phascolarctos_cinereus
ENSMICG00000005256	SCAF4	100	97.038	ENSPPYG00000011355	SCAF4	100	97.038	Pongo_abelii
ENSMICG00000005256	SCAF4	95	93.333	ENSPCAG00000009998	SCAF4	92	93.333	Procavia_capensis
ENSMICG00000005256	SCAF4	100	97.565	ENSPCOG00000018710	SCAF4	100	97.565	Propithecus_coquereli
ENSMICG00000005256	SCAF4	100	93.345	ENSPVAG00000005220	SCAF4	100	93.082	Pteropus_vampyrus
ENSMICG00000005256	SCAF4	76	58.769	ENSPNAG00000016892	scaf4a	60	64.468	Pygocentrus_nattereri
ENSMICG00000005256	SCAF4	98	87.433	ENSRNOG00000002104	Scaf4	98	85.347	Rattus_norvegicus
ENSMICG00000005256	SCAF4	99	95.272	ENSRBIG00000040007	SCAF4	99	95.272	Rhinopithecus_bieti
ENSMICG00000005256	SCAF4	100	97.293	ENSRROG00000029488	SCAF4	100	97.293	Rhinopithecus_roxellana
ENSMICG00000005256	SCAF4	99	86.111	ENSSHAG00000001581	SCAF4	99	85.305	Sarcophilus_harrisii
ENSMICG00000005256	SCAF4	88	46.958	ENSSFOG00015006338	scaf4a	54	60.374	Scleropages_formosus
ENSMICG00000005256	SCAF4	66	59.636	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSMICG00000005256	SCAF4	57	61.071	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSMICG00000005256	SCAF4	57	61.071	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSMICG00000005256	SCAF4	100	90.113	ENSSARG00000009994	SCAF4	100	89.419	Sorex_araneus
ENSMICG00000005256	SCAF4	100	90.587	ENSSSCG00000021023	SCAF4	100	90.674	Sus_scrofa
ENSMICG00000005256	SCAF4	75	72.017	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSMICG00000005256	SCAF4	50	60.219	ENSTRUG00000009536	-	65	58.029	Takifugu_rubripes
ENSMICG00000005256	SCAF4	99	93.021	ENSTTRG00000010963	SCAF4	100	92.933	Tursiops_truncatus
ENSMICG00000005256	SCAF4	100	91.681	ENSUAMG00000008860	SCAF4	100	91.944	Ursus_americanus
ENSMICG00000005256	SCAF4	99	93.885	ENSUMAG00000016962	SCAF4	100	93.885	Ursus_maritimus
ENSMICG00000005256	SCAF4	99	95.128	ENSVVUG00000002953	SCAF4	100	95.128	Vulpes_vulpes
ENSMICG00000005256	SCAF4	99	56.949	ENSXETG00000007351	scaf4	63	66.857	Xenopus_tropicalis