EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000005283 (Gene tree)
Gene ID: 105862368
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 28918 bases
Position: chr2:96884848-96913765
Accession: 105862368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004814	TRM13	PF05206.14	1.7e-92	1	1
ENSMICP00000035110	TRM13	PF05206.14	1.7e-92	1	1
ENSMICP00000044624	zf-U11-48K	PF05253.12	6.3e-10	1	1
ENSMICP00000026984	zf-U11-48K	PF05253.12	6.3e-10	1	1
ENSMICP00000004814	zf-U11-48K	PF05253.12	3.3e-09	1	1
ENSMICP00000035110	zf-U11-48K	PF05253.12	3.3e-09	1	1
ENSMICP00000026984	zf-TRM13_CCCH	PF11722.8	2.4e-14	1	1
ENSMICP00000004814	zf-TRM13_CCCH	PF11722.8	3.8e-13	1	1
ENSMICP00000035110	zf-TRM13_CCCH	PF11722.8	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000065040	TRMT13-204	393	-	ENSMICP00000044624	130 (aa)	-	UPI000C2ED7F0
ENSMICT00000005281	TRMT13-202	3424	XM_012748600	ENSMICP00000004814	481 (aa)	XP_012604054	UPI000643DAC1
ENSMICT00000035977	TRMT13-203	330	-	ENSMICP00000026984	109 (aa)	-	UPI00085B1CFC
ENSMICT00000040167	TRMT13-201	3934	XM_012748597	ENSMICP00000035110	481 (aa)	XP_012604051	UPI000643DAC1

Gene Model

Click here to download ENSMICG00000005283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000005283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000005283	TRMT13	100	96.923	ENSG00000122435	TRMT13	100	96.923	Homo_sapiens
ENSMICG00000005283	TRMT13	86	62.766	ENSAPOG00000015131	trmt13	99	49.095	Acanthochromis_polyacanthus
ENSMICG00000005283	TRMT13	100	93.578	ENSAMEG00000008917	TRMT13	100	92.100	Ailuropoda_melanoleuca
ENSMICG00000005283	TRMT13	99	57.407	ENSACIG00000005804	trmt13	99	50.000	Amphilophus_citrinellus
ENSMICG00000005283	TRMT13	94	55.147	ENSAOCG00000023585	trmt13	99	49.602	Amphiprion_ocellaris
ENSMICG00000005283	TRMT13	94	55.147	ENSAPEG00000004025	trmt13	99	49.402	Amphiprion_percula
ENSMICG00000005283	TRMT13	99	60.185	ENSATEG00000006597	trmt13	99	50.509	Anabas_testudineus
ENSMICG00000005283	TRMT13	88	67.371	ENSAPLG00000014924	TRMT13	99	67.371	Anas_platyrhynchos
ENSMICG00000005283	TRMT13	97	67.925	ENSACAG00000003498	TRMT13	98	64.286	Anolis_carolinensis
ENSMICG00000005283	TRMT13	100	94.387	ENSANAG00000019525	TRMT13	100	94.387	Aotus_nancymaae
ENSMICG00000005283	TRMT13	96	53.602	ENSACLG00000020018	trmt13	99	53.602	Astatotilapia_calliptera
ENSMICG00000005283	TRMT13	95	54.390	ENSAMXG00000017963	trmt13	97	54.604	Astyanax_mexicanus
ENSMICG00000005283	TRMT13	100	90.852	ENSBTAG00000015781	TRMT13	100	90.852	Bos_taurus
ENSMICG00000005283	TRMT13	100	92.661	ENSCJAG00000000200	TRMT13	100	92.308	Callithrix_jacchus
ENSMICG00000005283	TRMT13	65	93.312	ENSCAFG00000020021	TRMT13	99	93.312	Canis_familiaris
ENSMICG00000005283	TRMT13	100	90.909	ENSCAFG00020011572	TRMT13	95	93.091	Canis_lupus_dingo
ENSMICG00000005283	TRMT13	100	91.060	ENSCHIG00000015395	TRMT13	100	91.060	Capra_hircus
ENSMICG00000005283	TRMT13	100	90.769	ENSTSYG00000010811	TRMT13	100	90.769	Carlito_syrichta
ENSMICG00000005283	TRMT13	75	70.248	ENSCAPG00000009085	TRMT13	100	70.799	Cavia_aperea
ENSMICG00000005283	TRMT13	100	95.413	ENSCPOG00000000694	TRMT13	100	91.268	Cavia_porcellus
ENSMICG00000005283	TRMT13	100	94.595	ENSCCAG00000023772	TRMT13	100	94.595	Cebus_capucinus
ENSMICG00000005283	TRMT13	100	93.347	ENSCATG00000033556	TRMT13	100	93.347	Cercocebus_atys
ENSMICG00000005283	TRMT13	89	85.246	ENSCLAG00000008220	TRMT13	100	85.981	Chinchilla_lanigera
ENSMICG00000005283	TRMT13	100	93.971	ENSCSAG00000001506	TRMT13	100	93.971	Chlorocebus_sabaeus
ENSMICG00000005283	TRMT13	100	69.439	ENSCPBG00000026671	TRMT13	100	69.439	Chrysemys_picta_bellii
ENSMICG00000005283	TRMT13	100	94.179	ENSCANG00000034659	TRMT13	100	94.179	Colobus_angolensis_palliatus
ENSMICG00000005283	TRMT13	98	87.686	ENSCGRG00001021601	Trmt13	98	87.686	Cricetulus_griseus_chok1gshd
ENSMICG00000005283	TRMT13	53	84.436	ENSCGRG00000000093	-	99	84.436	Cricetulus_griseus_crigri
ENSMICG00000005283	TRMT13	96	49.353	ENSCSEG00000000591	trmt13	98	49.353	Cynoglossus_semilaevis
ENSMICG00000005283	TRMT13	96	51.429	ENSCVAG00000017342	trmt13	93	50.737	Cyprinodon_variegatus
ENSMICG00000005283	TRMT13	95	57.667	ENSDARG00000102846	trmt13	96	57.667	Danio_rerio
ENSMICG00000005283	TRMT13	100	84.956	ENSDNOG00000001710	TRMT13	84	89.130	Dasypus_novemcinctus
ENSMICG00000005283	TRMT13	100	89.908	ENSDORG00000015808	Trmt13	99	88.150	Dipodomys_ordii
ENSMICG00000005283	TRMT13	95	30.818	FBgn0037435	CG18048	94	30.818	Drosophila_melanogaster
ENSMICG00000005283	TRMT13	99	86.607	ENSETEG00000005819	TRMT13	99	76.827	Echinops_telfairi
ENSMICG00000005283	TRMT13	95	45.416	ENSEBUG00000014444	trmt13	96	45.494	Eptatretus_burgeri
ENSMICG00000005283	TRMT13	100	94.495	ENSEASG00005015918	TRMT13	100	93.555	Equus_asinus_asinus
ENSMICG00000005283	TRMT13	100	94.495	ENSECAG00000022626	TRMT13	100	93.139	Equus_caballus
ENSMICG00000005283	TRMT13	95	84.615	ENSEEUG00000000294	TRMT13	80	80.380	Erinaceus_europaeus
ENSMICG00000005283	TRMT13	94	61.765	ENSELUG00000003803	trmt13	99	55.462	Esox_lucius
ENSMICG00000005283	TRMT13	99	96.124	ENSFCAG00000030618	TRMT13	99	96.124	Felis_catus
ENSMICG00000005283	TRMT13	100	67.890	ENSFALG00000002424	TRMT13	99	64.644	Ficedula_albicollis
ENSMICG00000005283	TRMT13	100	93.578	ENSFDAG00000006342	TRMT13	99	91.597	Fukomys_damarensis
ENSMICG00000005283	TRMT13	96	47.857	ENSFHEG00000022954	trmt13	97	52.369	Fundulus_heteroclitus
ENSMICG00000005283	TRMT13	95	48.791	ENSGMOG00000013223	trmt13	100	49.231	Gadus_morhua
ENSMICG00000005283	TRMT13	95	66.813	ENSGALG00000005290	TRMT13	99	65.263	Gallus_gallus
ENSMICG00000005283	TRMT13	95	51.200	ENSGAFG00000001577	trmt13	81	51.733	Gambusia_affinis
ENSMICG00000005283	TRMT13	98	50.209	ENSGACG00000013428	trmt13	97	51.828	Gasterosteus_aculeatus
ENSMICG00000005283	TRMT13	100	69.917	ENSGAGG00000023303	TRMT13	99	73.455	Gopherus_agassizii
ENSMICG00000005283	TRMT13	100	93.347	ENSGGOG00000005616	TRMT13	100	93.347	Gorilla_gorilla
ENSMICG00000005283	TRMT13	96	54.025	ENSHBUG00000007754	trmt13	99	54.025	Haplochromis_burtoni
ENSMICG00000005283	TRMT13	100	94.495	ENSHGLG00000002164	TRMT13	99	92.017	Heterocephalus_glaber_female
ENSMICG00000005283	TRMT13	100	94.495	ENSHGLG00100001618	TRMT13	99	92.017	Heterocephalus_glaber_male
ENSMICG00000005283	TRMT13	96	48.283	ENSHCOG00000020553	trmt13	98	48.283	Hippocampus_comes
ENSMICG00000005283	TRMT13	94	61.765	ENSIPUG00000024787	trmt13	98	56.645	Ictalurus_punctatus
ENSMICG00000005283	TRMT13	100	94.179	ENSSTOG00000013483	TRMT13	100	94.179	Ictidomys_tridecemlineatus
ENSMICG00000005283	TRMT13	100	88.991	ENSJJAG00000018012	Trmt13	100	88.565	Jaculus_jaculus
ENSMICG00000005283	TRMT13	64	50.794	ENSKMAG00000007639	trmt13	92	50.794	Kryptolebias_marmoratus
ENSMICG00000005283	TRMT13	87	62.105	ENSLBEG00000020238	trmt13	99	50.731	Labrus_bergylta
ENSMICG00000005283	TRMT13	99	60.251	ENSLACG00000013153	TRMT13	100	60.149	Latimeria_chalumnae
ENSMICG00000005283	TRMT13	96	58.993	ENSLOCG00000000418	trmt13	97	59.170	Lepisosteus_oculatus
ENSMICG00000005283	TRMT13	77	89.459	ENSLAFG00000002383	TRMT13	100	89.459	Loxodonta_africana
ENSMICG00000005283	TRMT13	100	93.971	ENSMFAG00000034681	TRMT13	100	93.971	Macaca_fascicularis
ENSMICG00000005283	TRMT13	100	93.971	ENSMMUG00000004243	TRMT13	100	93.971	Macaca_mulatta
ENSMICG00000005283	TRMT13	100	93.971	ENSMNEG00000036102	TRMT13	100	93.971	Macaca_nemestrina
ENSMICG00000005283	TRMT13	100	93.763	ENSMLEG00000034258	TRMT13	100	93.763	Mandrillus_leucophaeus
ENSMICG00000005283	TRMT13	96	51.471	ENSMAMG00000016597	trmt13	98	51.471	Mastacembelus_armatus
ENSMICG00000005283	TRMT13	96	53.390	ENSMZEG00005020959	trmt13	99	53.390	Maylandia_zebra
ENSMICG00000005283	TRMT13	88	67.612	ENSMGAG00000006970	TRMT13	99	67.612	Meleagris_gallopavo
ENSMICG00000005283	TRMT13	99	85.000	ENSMAUG00000010448	Trmt13	99	85.000	Mesocricetus_auratus
ENSMICG00000005283	TRMT13	100	85.321	ENSMOCG00000019914	Trmt13	99	82.917	Microtus_ochrogaster
ENSMICG00000005283	TRMT13	94	39.706	ENSMMOG00000007762	trmt13	89	52.075	Mola_mola
ENSMICG00000005283	TRMT13	100	76.106	ENSMODG00000003646	TRMT13	100	75.876	Monodelphis_domestica
ENSMICG00000005283	TRMT13	88	59.375	ENSMALG00000020965	trmt13	97	51.188	Monopterus_albus
ENSMICG00000005283	TRMT13	100	88.073	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.262	Mus_caroli
ENSMICG00000005283	TRMT13	100	86.239	ENSMUSG00000033439	Trmt13	94	92.262	Mus_musculus
ENSMICG00000005283	TRMT13	100	88.073	MGP_PahariEiJ_G0027014	Trmt13	99	87.238	Mus_pahari
ENSMICG00000005283	TRMT13	100	87.156	MGP_SPRETEiJ_G0026518	Trmt13	94	92.262	Mus_spretus
ENSMICG00000005283	TRMT13	79	89.764	ENSMPUG00000002078	-	100	89.764	Mustela_putorius_furo
ENSMICG00000005283	TRMT13	100	91.743	ENSMPUG00000012169	-	98	90.226	Mustela_putorius_furo
ENSMICG00000005283	TRMT13	100	90.826	ENSMLUG00000002124	TRMT13	100	79.002	Myotis_lucifugus
ENSMICG00000005283	TRMT13	96	48.729	ENSNBRG00000006783	trmt13	95	50.216	Neolamprologus_brichardi
ENSMICG00000005283	TRMT13	100	93.347	ENSNLEG00000035917	TRMT13	100	93.347	Nomascus_leucogenys
ENSMICG00000005283	TRMT13	100	60.909	ENSMEUG00000013346	-	100	74.194	Notamacropus_eugenii
ENSMICG00000005283	TRMT13	100	90.826	ENSOPRG00000012048	TRMT13	67	91.544	Ochotona_princeps
ENSMICG00000005283	TRMT13	100	91.743	ENSODEG00000006075	-	95	91.018	Octodon_degus
ENSMICG00000005283	TRMT13	96	54.025	ENSONIG00000004574	trmt13	99	54.025	Oreochromis_niloticus
ENSMICG00000005283	TRMT13	89	74.710	ENSOANG00000012057	TRMT13	99	74.710	Ornithorhynchus_anatinus
ENSMICG00000005283	TRMT13	100	92.661	ENSOCUG00000023095	TRMT13	100	92.100	Oryctolagus_cuniculus
ENSMICG00000005283	TRMT13	96	48.941	ENSORLG00000003320	trmt13	99	49.576	Oryzias_latipes
ENSMICG00000005283	TRMT13	95	49.356	ENSORLG00020005972	trmt13	97	49.580	Oryzias_latipes_hni
ENSMICG00000005283	TRMT13	96	54.286	ENSORLG00015002270	trmt13	99	52.866	Oryzias_latipes_hsok
ENSMICG00000005283	TRMT13	96	55.000	ENSOMEG00000006724	trmt13	95	53.066	Oryzias_melastigma
ENSMICG00000005283	TRMT13	100	95.413	ENSOGAG00000005618	TRMT13	97	93.971	Otolemur_garnettii
ENSMICG00000005283	TRMT13	100	91.060	ENSOARG00000017983	TRMT13	100	91.060	Ovis_aries
ENSMICG00000005283	TRMT13	100	92.931	ENSPPAG00000043736	TRMT13	100	92.931	Pan_paniscus
ENSMICG00000005283	TRMT13	100	96.154	ENSPPRG00000003424	TRMT13	100	96.154	Panthera_pardus
ENSMICG00000005283	TRMT13	100	96.154	ENSPTIG00000018598	TRMT13	100	96.154	Panthera_tigris_altaica
ENSMICG00000005283	TRMT13	100	92.931	ENSPTRG00000001001	TRMT13	100	92.931	Pan_troglodytes
ENSMICG00000005283	TRMT13	100	93.971	ENSPANG00000007598	TRMT13	100	93.971	Papio_anubis
ENSMICG00000005283	TRMT13	96	56.087	ENSPKIG00000001514	trmt13	98	56.087	Paramormyrops_kingsleyae
ENSMICG00000005283	TRMT13	98	67.832	ENSPSIG00000012703	TRMT13	99	70.504	Pelodiscus_sinensis
ENSMICG00000005283	TRMT13	97	59.434	ENSPMGG00000013298	trmt13	94	52.083	Periophthalmus_magnuspinnatus
ENSMICG00000005283	TRMT13	100	85.321	ENSPEMG00000000275	Trmt13	99	83.958	Peromyscus_maniculatus_bairdii
ENSMICG00000005283	TRMT13	94	48.951	ENSPMAG00000000823	trmt13	97	45.773	Petromyzon_marinus
ENSMICG00000005283	TRMT13	100	77.876	ENSPCIG00000007699	TRMT13	100	77.320	Phascolarctos_cinereus
ENSMICG00000005283	TRMT13	97	49.680	ENSPFOG00000008675	trmt13	97	49.680	Poecilia_formosa
ENSMICG00000005283	TRMT13	96	49.286	ENSPLAG00000009709	trmt13	99	49.257	Poecilia_latipinna
ENSMICG00000005283	TRMT13	96	48.571	ENSPMEG00000022954	trmt13	99	48.401	Poecilia_mexicana
ENSMICG00000005283	TRMT13	96	48.837	ENSPREG00000005645	trmt13	91	50.360	Poecilia_reticulata
ENSMICG00000005283	TRMT13	100	93.139	ENSPPYG00000001120	TRMT13	100	93.139	Pongo_abelii
ENSMICG00000005283	TRMT13	100	89.813	ENSPCAG00000002340	TRMT13	100	89.813	Procavia_capensis
ENSMICG00000005283	TRMT13	100	98.165	ENSPCOG00000017984	TRMT13	100	98.165	Propithecus_coquereli
ENSMICG00000005283	TRMT13	100	92.516	ENSPVAG00000017430	TRMT13	100	92.516	Pteropus_vampyrus
ENSMICG00000005283	TRMT13	96	51.907	ENSPNYG00000013690	trmt13	99	51.907	Pundamilia_nyererei
ENSMICG00000005283	TRMT13	83	67.778	ENSPNAG00000022130	trmt13	97	55.338	Pygocentrus_nattereri
ENSMICG00000005283	TRMT13	100	87.156	ENSRNOG00000015140	Trmt13	96	86.611	Rattus_norvegicus
ENSMICG00000005283	TRMT13	100	94.179	ENSRBIG00000037686	TRMT13	100	94.179	Rhinopithecus_bieti
ENSMICG00000005283	TRMT13	100	94.179	ENSRROG00000044057	TRMT13	100	94.179	Rhinopithecus_roxellana
ENSMICG00000005283	TRMT13	100	93.971	ENSSBOG00000026541	TRMT13	100	93.971	Saimiri_boliviensis_boliviensis
ENSMICG00000005283	TRMT13	91	77.346	ENSSHAG00000005213	TRMT13	97	77.346	Sarcophilus_harrisii
ENSMICG00000005283	TRMT13	96	56.115	ENSSFOG00015017560	trmt13	99	54.873	Scleropages_formosus
ENSMICG00000005283	TRMT13	94	59.804	ENSSMAG00000014592	trmt13	97	50.939	Scophthalmus_maximus
ENSMICG00000005283	TRMT13	95	51.681	ENSSDUG00000015508	trmt13	97	51.340	Seriola_dumerili
ENSMICG00000005283	TRMT13	95	51.782	ENSSLDG00000019060	trmt13	96	51.782	Seriola_lalandi_dorsalis
ENSMICG00000005283	TRMT13	100	86.239	ENSSARG00000010344	TRMT13	99	76.987	Sorex_araneus
ENSMICG00000005283	TRMT13	96	68.251	ENSSPUG00000016339	TRMT13	100	68.251	Sphenodon_punctatus
ENSMICG00000005283	TRMT13	89	62.887	ENSSPAG00000011922	trmt13	99	52.469	Stegastes_partitus
ENSMICG00000005283	TRMT13	100	92.723	ENSSSCG00000006869	TRMT13	100	92.723	Sus_scrofa
ENSMICG00000005283	TRMT13	97	66.026	ENSTGUG00000005253	TRMT13	100	66.026	Taeniopygia_guttata
ENSMICG00000005283	TRMT13	95	49.682	ENSTRUG00000008400	trmt13	99	49.687	Takifugu_rubripes
ENSMICG00000005283	TRMT13	86	76.683	ENSTBEG00000008911	TRMT13	100	76.683	Tupaia_belangeri
ENSMICG00000005283	TRMT13	70	96.053	ENSTTRG00000015302	-	60	96.053	Tursiops_truncatus
ENSMICG00000005283	TRMT13	100	90.826	ENSUAMG00000017251	TRMT13	100	86.486	Ursus_americanus
ENSMICG00000005283	TRMT13	100	92.661	ENSUMAG00000007901	TRMT13	100	92.100	Ursus_maritimus
ENSMICG00000005283	TRMT13	90	75.231	ENSVPAG00000001034	TRMT13	100	75.231	Vicugna_pacos
ENSMICG00000005283	TRMT13	99	92.931	ENSVVUG00000021996	TRMT13	99	92.931	Vulpes_vulpes
ENSMICG00000005283	TRMT13	88	67.708	ENSXETG00000013204	trmt13	96	57.205	Xenopus_tropicalis
ENSMICG00000005283	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSMICG00000005283	TRMT13	96	49.286	ENSXMAG00000010765	trmt13	99	48.414	Xiphophorus_maculatus