EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000005365 (Gene tree)
Gene ID: 105855408
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 9975 bases
Position: chr6:997401-1007375
Accession: 105855408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004899	tRNA-synt_1g	PF09334.11	1.1e-12	1	1
ENSMICP00000004899	Anticodon_1	PF08264.13	3.2e-24	1	1
ENSMICP00000004899	tRNA-synt_1	PF00133.22	4.5e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000005373	VARS2-201	3136	XM_020287331	ENSMICP00000004899	892 (aa)	XP_020142920	UPI000C2EB94E

Gene Model

Click here to download ENSMICG00000005365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000005365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000005365	VARS2	92	55.742	ENSMICG00000003548	VARS	70	54.134

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000005365	VARS2	92	57.434	ENSAPOG00000007396	vars2	81	55.430	Acanthochromis_polyacanthus
ENSMICG00000005365	VARS2	100	87.892	ENSAMEG00000012997	VARS2	82	87.892	Ailuropoda_melanoleuca
ENSMICG00000005365	VARS2	92	58.566	ENSACIG00000004344	vars2	77	58.566	Amphilophus_citrinellus
ENSMICG00000005365	VARS2	92	57.074	ENSAOCG00000000476	vars2	83	54.596	Amphiprion_ocellaris
ENSMICG00000005365	VARS2	92	57.023	ENSAPEG00000008646	vars2	81	54.394	Amphiprion_percula
ENSMICG00000005365	VARS2	92	58.788	ENSATEG00000012291	vars2	81	56.847	Anabas_testudineus
ENSMICG00000005365	VARS2	97	62.429	ENSACAG00000022093	VARS2	81	62.429	Anolis_carolinensis
ENSMICG00000005365	VARS2	100	91.816	ENSANAG00000038018	VARS2	84	91.816	Aotus_nancymaae
ENSMICG00000005365	VARS2	99	55.184	ENSACLG00000018673	vars2	83	55.184	Astatotilapia_calliptera
ENSMICG00000005365	VARS2	97	57.955	ENSAMXG00000017773	vars2	86	57.399	Astyanax_mexicanus
ENSMICG00000005365	VARS2	100	89.013	ENSBTAG00000010698	VARS2	84	89.013	Bos_taurus
ENSMICG00000005365	VARS2	100	91.368	ENSCJAG00000019826	VARS2	84	91.368	Callithrix_jacchus
ENSMICG00000005365	VARS2	100	85.538	ENSCAFG00000000454	VARS2	84	85.538	Canis_familiaris
ENSMICG00000005365	VARS2	100	85.538	ENSCAFG00020019387	VARS2	91	85.538	Canis_lupus_dingo
ENSMICG00000005365	VARS2	100	88.453	ENSCHIG00000007847	VARS2	84	88.453	Capra_hircus
ENSMICG00000005365	VARS2	100	90.135	ENSTSYG00000009904	VARS2	84	90.135	Carlito_syrichta
ENSMICG00000005365	VARS2	86	86.126	ENSCAPG00000017770	VARS2	82	86.126	Cavia_aperea
ENSMICG00000005365	VARS2	100	86.034	ENSCPOG00000021834	VARS2	84	86.034	Cavia_porcellus
ENSMICG00000005365	VARS2	100	92.152	ENSCCAG00000037907	VARS2	92	92.152	Cebus_capucinus
ENSMICG00000005365	VARS2	100	91.480	ENSCATG00000032554	VARS2	84	91.480	Cercocebus_atys
ENSMICG00000005365	VARS2	100	86.338	ENSCLAG00000002889	VARS2	84	86.338	Chinchilla_lanigera
ENSMICG00000005365	VARS2	100	91.143	ENSCSAG00000008327	VARS2	84	91.143	Chlorocebus_sabaeus
ENSMICG00000005365	VARS2	91	66.952	ENSCPBG00000021502	VARS2	85	68.012	Chrysemys_picta_bellii
ENSMICG00000005365	VARS2	100	90.807	ENSCANG00000014991	VARS2	83	90.807	Colobus_angolensis_palliatus
ENSMICG00000005365	VARS2	99	85.097	ENSCGRG00001021535	Vars2	84	84.978	Cricetulus_griseus_chok1gshd
ENSMICG00000005365	VARS2	99	85.097	ENSCGRG00000014112	Vars2	84	84.978	Cricetulus_griseus_crigri
ENSMICG00000005365	VARS2	65	67.532	ENSCSEG00000015432	vars2	62	68.750	Cynoglossus_semilaevis
ENSMICG00000005365	VARS2	66	55.980	ENSCVAG00000017765	vars2	83	55.980	Cyprinodon_variegatus
ENSMICG00000005365	VARS2	99	55.617	ENSDARG00000056717	vars2	83	55.617	Danio_rerio
ENSMICG00000005365	VARS2	75	87.779	ENSDORG00000008516	Vars2	74	87.779	Dipodomys_ordii
ENSMICG00000005365	VARS2	100	75.448	ENSETEG00000014844	VARS2	84	75.448	Echinops_telfairi
ENSMICG00000005365	VARS2	100	89.350	ENSEASG00005019997	VARS2	93	85.073	Equus_asinus_asinus
ENSMICG00000005365	VARS2	100	90.807	ENSECAG00000018202	VARS2	84	90.807	Equus_caballus
ENSMICG00000005365	VARS2	62	82.524	ENSEEUG00000012591	-	52	82.524	Erinaceus_europaeus
ENSMICG00000005365	VARS2	93	56.776	ENSELUG00000017824	vars2	80	55.919	Esox_lucius
ENSMICG00000005365	VARS2	100	88.677	ENSFCAG00000010531	VARS2	84	88.677	Felis_catus
ENSMICG00000005365	VARS2	100	86.114	ENSFDAG00000017216	VARS2	84	86.114	Fukomys_damarensis
ENSMICG00000005365	VARS2	92	54.335	ENSFHEG00000013932	vars2	84	52.511	Fundulus_heteroclitus
ENSMICG00000005365	VARS2	92	59.512	ENSGMOG00000018960	vars2	85	59.512	Gadus_morhua
ENSMICG00000005365	VARS2	82	54.848	ENSGAFG00000004737	vars2	75	54.848	Gambusia_affinis
ENSMICG00000005365	VARS2	92	59.046	ENSGACG00000001464	vars2	83	59.046	Gasterosteus_aculeatus
ENSMICG00000005365	VARS2	90	66.337	ENSGAGG00000011652	VARS2	81	66.337	Gopherus_agassizii
ENSMICG00000005365	VARS2	100	90.807	ENSGGOG00000014587	VARS2	84	90.807	Gorilla_gorilla
ENSMICG00000005365	VARS2	89	57.550	ENSHBUG00000002448	vars2	77	57.550	Haplochromis_burtoni
ENSMICG00000005365	VARS2	100	84.546	ENSHGLG00000012886	VARS2	81	84.546	Heterocephalus_glaber_female
ENSMICG00000005365	VARS2	100	84.434	ENSHGLG00100016535	VARS2	84	84.434	Heterocephalus_glaber_male
ENSMICG00000005365	VARS2	63	56.969	ENSHCOG00000017907	vars2	76	56.969	Hippocampus_comes
ENSMICG00000005365	VARS2	92	60.218	ENSIPUG00000015573	Vars2	83	57.461	Ictalurus_punctatus
ENSMICG00000005365	VARS2	100	89.910	ENSSTOG00000009924	VARS2	84	89.910	Ictidomys_tridecemlineatus
ENSMICG00000005365	VARS2	100	85.874	ENSJJAG00000011144	Vars2	84	85.874	Jaculus_jaculus
ENSMICG00000005365	VARS2	93	56.927	ENSKMAG00000001393	vars2	80	56.314	Kryptolebias_marmoratus
ENSMICG00000005365	VARS2	96	55.940	ENSLBEG00000011949	vars2	80	55.266	Labrus_bergylta
ENSMICG00000005365	VARS2	62	63.063	ENSLBEG00000005480	-	82	62.590	Labrus_bergylta
ENSMICG00000005365	VARS2	95	55.260	ENSLACG00000001576	-	83	55.376	Latimeria_chalumnae
ENSMICG00000005365	VARS2	100	86.659	ENSLAFG00000015183	VARS2	84	86.659	Loxodonta_africana
ENSMICG00000005365	VARS2	100	90.471	ENSMFAG00000042367	VARS2	84	90.471	Macaca_fascicularis
ENSMICG00000005365	VARS2	100	90.583	ENSMMUG00000018609	VARS2	84	90.583	Macaca_mulatta
ENSMICG00000005365	VARS2	100	90.583	ENSMNEG00000043163	VARS2	84	90.583	Macaca_nemestrina
ENSMICG00000005365	VARS2	100	91.480	ENSMLEG00000041728	VARS2	82	91.480	Mandrillus_leucophaeus
ENSMICG00000005365	VARS2	95	55.736	ENSMAMG00000020339	vars2	81	55.204	Mastacembelus_armatus
ENSMICG00000005365	VARS2	99	55.072	ENSMZEG00005017669	vars2	83	55.072	Maylandia_zebra
ENSMICG00000005365	VARS2	100	85.426	ENSMAUG00000018946	Vars2	84	85.426	Mesocricetus_auratus
ENSMICG00000005365	VARS2	93	85.612	ENSMOCG00000014607	Vars2	84	85.612	Microtus_ochrogaster
ENSMICG00000005365	VARS2	92	57.557	ENSMMOG00000012122	vars2	82	55.706	Mola_mola
ENSMICG00000005365	VARS2	100	77.156	ENSMODG00000015848	VARS2	83	77.156	Monodelphis_domestica
ENSMICG00000005365	VARS2	92	58.151	ENSMALG00000009217	vars2	82	58.151	Monopterus_albus
ENSMICG00000005365	VARS2	100	86.771	MGP_CAROLIEiJ_G0021529	Vars2	93	86.322	Mus_caroli
ENSMICG00000005365	VARS2	100	85.874	ENSMUSG00000038838	Vars2	93	84.843	Mus_musculus
ENSMICG00000005365	VARS2	100	86.211	MGP_PahariEiJ_G0020523	Vars2	93	85.930	Mus_pahari
ENSMICG00000005365	VARS2	100	86.099	MGP_SPRETEiJ_G0022436	Vars2	93	85.930	Mus_spretus
ENSMICG00000005365	VARS2	100	86.996	ENSMPUG00000011643	VARS2	84	86.996	Mustela_putorius_furo
ENSMICG00000005365	VARS2	100	85.442	ENSMLUG00000002356	VARS2	81	85.442	Myotis_lucifugus
ENSMICG00000005365	VARS2	99	78.620	ENSNGAG00000020607	Vars2	84	78.460	Nannospalax_galili
ENSMICG00000005365	VARS2	100	88.341	ENSNLEG00000005625	VARS2	83	88.341	Nomascus_leucogenys
ENSMICG00000005365	VARS2	75	73.957	ENSMEUG00000014475	VARS2	72	73.957	Notamacropus_eugenii
ENSMICG00000005365	VARS2	88	83.628	ENSOPRG00000000682	VARS2	74	83.628	Ochotona_princeps
ENSMICG00000005365	VARS2	100	85.442	ENSODEG00000017965	VARS2	84	85.442	Octodon_degus
ENSMICG00000005365	VARS2	92	40.396	ENSONIG00000004734	vars2	71	47.069	Oreochromis_niloticus
ENSMICG00000005365	VARS2	71	96.970	ENSOANG00000000398	-	76	96.970	Ornithorhynchus_anatinus
ENSMICG00000005365	VARS2	100	81.036	ENSOCUG00000021496	VARS2	54	81.416	Oryctolagus_cuniculus
ENSMICG00000005365	VARS2	92	57.964	ENSORLG00000010632	vars2	79	56.502	Oryzias_latipes
ENSMICG00000005365	VARS2	94	57.444	ENSORLG00020018584	vars2	80	56.357	Oryzias_latipes_hni
ENSMICG00000005365	VARS2	94	57.327	ENSORLG00015010408	vars2	79	56.387	Oryzias_latipes_hsok
ENSMICG00000005365	VARS2	94	57.913	ENSOMEG00000008360	vars2	82	56.181	Oryzias_melastigma
ENSMICG00000005365	VARS2	100	91.499	ENSOGAG00000006087	VARS2	82	91.499	Otolemur_garnettii
ENSMICG00000005365	VARS2	100	87.458	ENSOARG00000010844	VARS2	83	87.458	Ovis_aries
ENSMICG00000005365	VARS2	100	90.919	ENSPPAG00000041141	VARS2	84	90.919	Pan_paniscus
ENSMICG00000005365	VARS2	100	88.004	ENSPPRG00000006751	VARS2	82	88.004	Panthera_pardus
ENSMICG00000005365	VARS2	100	87.892	ENSPTIG00000017799	VARS2	81	89.225	Panthera_tigris_altaica
ENSMICG00000005365	VARS2	100	90.919	ENSPTRG00000034497	VARS2	84	90.919	Pan_troglodytes
ENSMICG00000005365	VARS2	100	91.143	ENSPANG00000018481	VARS2	86	91.143	Papio_anubis
ENSMICG00000005365	VARS2	95	58.685	ENSPKIG00000011372	vars2	83	57.271	Paramormyrops_kingsleyae
ENSMICG00000005365	VARS2	70	67.987	ENSPSIG00000006206	VARS2	92	67.438	Pelodiscus_sinensis
ENSMICG00000005365	VARS2	97	57.013	ENSPMGG00000000465	vars2	81	57.013	Periophthalmus_magnuspinnatus
ENSMICG00000005365	VARS2	100	86.099	ENSPEMG00000014691	Vars2	84	86.099	Peromyscus_maniculatus_bairdii
ENSMICG00000005365	VARS2	100	78.027	ENSPCIG00000015040	VARS2	84	78.027	Phascolarctos_cinereus
ENSMICG00000005365	VARS2	92	58.213	ENSPFOG00000017616	vars2	80	55.530	Poecilia_formosa
ENSMICG00000005365	VARS2	92	57.641	ENSPLAG00000019778	vars2	83	54.465	Poecilia_latipinna
ENSMICG00000005365	VARS2	92	57.762	ENSPMEG00000011123	vars2	82	54.828	Poecilia_mexicana
ENSMICG00000005365	VARS2	92	51.322	ENSPREG00000014998	vars2	81	49.654	Poecilia_reticulata
ENSMICG00000005365	VARS2	100	91.256	ENSPPYG00000016424	VARS2	84	91.256	Pongo_abelii
ENSMICG00000005365	VARS2	81	80.134	ENSPCAG00000006946	VARS2	68	80.134	Procavia_capensis
ENSMICG00000005365	VARS2	100	92.770	ENSPCOG00000014839	VARS2	82	92.770	Propithecus_coquereli
ENSMICG00000005365	VARS2	100	87.220	ENSPVAG00000004197	VARS2	84	87.220	Pteropus_vampyrus
ENSMICG00000005365	VARS2	80	60.870	ENSPNYG00000010314	vars2	80	60.870	Pundamilia_nyererei
ENSMICG00000005365	VARS2	95	58.102	ENSPNAG00000026793	vars2	80	57.811	Pygocentrus_nattereri
ENSMICG00000005365	VARS2	100	85.874	ENSRNOG00000000833	Vars2	84	85.874	Rattus_norvegicus
ENSMICG00000005365	VARS2	100	90.583	ENSRBIG00000032725	VARS2	84	90.583	Rhinopithecus_bieti
ENSMICG00000005365	VARS2	100	90.695	ENSRROG00000043847	VARS2	84	90.695	Rhinopithecus_roxellana
ENSMICG00000005365	VARS2	100	89.497	ENSSBOG00000033240	VARS2	82	89.497	Saimiri_boliviensis_boliviensis
ENSMICG00000005365	VARS2	100	77.018	ENSSHAG00000009307	VARS2	84	77.018	Sarcophilus_harrisii
ENSMICG00000005365	VARS2	95	58.053	ENSSFOG00015016187	vars2	81	57.015	Scleropages_formosus
ENSMICG00000005365	VARS2	93	58.760	ENSSMAG00000020842	vars2	82	57.143	Scophthalmus_maximus
ENSMICG00000005365	VARS2	92	58.463	ENSSDUG00000011598	vars2	82	56.054	Seriola_dumerili
ENSMICG00000005365	VARS2	89	59.153	ENSSLDG00000015492	vars2	81	56.178	Seriola_lalandi_dorsalis
ENSMICG00000005365	VARS2	60	91.241	ENSSARG00000003786	-	61	91.241	Sorex_araneus
ENSMICG00000005365	VARS2	90	64.179	ENSSPUG00000014700	VARS2	84	63.433	Sphenodon_punctatus
ENSMICG00000005365	VARS2	92	56.326	ENSSPAG00000004654	vars2	81	54.020	Stegastes_partitus
ENSMICG00000005365	VARS2	100	88.453	ENSSSCG00000001384	VARS2	90	88.453	Sus_scrofa
ENSMICG00000005365	VARS2	93	59.042	ENSTRUG00000005264	vars2	82	57.617	Takifugu_rubripes
ENSMICG00000005365	VARS2	99	55.345	ENSTNIG00000005916	vars2	83	55.765	Tetraodon_nigroviridis
ENSMICG00000005365	VARS2	100	76.570	ENSTTRG00000012243	VARS2	86	76.570	Tursiops_truncatus
ENSMICG00000005365	VARS2	100	87.780	ENSUAMG00000026124	VARS2	87	87.995	Ursus_americanus
ENSMICG00000005365	VARS2	100	88.004	ENSUMAG00000019894	VARS2	84	88.004	Ursus_maritimus
ENSMICG00000005365	VARS2	100	86.323	ENSVVUG00000010754	VARS2	80	86.323	Vulpes_vulpes
ENSMICG00000005365	VARS2	91	58.151	ENSXETG00000003036	vars2	85	58.151	Xenopus_tropicalis
ENSMICG00000005365	VARS2	92	58.171	ENSXCOG00000003455	vars2	84	55.056	Xiphophorus_couchianus
ENSMICG00000005365	VARS2	92	57.143	ENSXMAG00000013523	vars2	82	54.374	Xiphophorus_maculatus