EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000005430 (Gene tree)
Gene ID: 105870953
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 19606 bases
Position: chr21:17463171-17482776
Accession: 105870953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000047230	zf-C2H2	PF00096.26	2.9e-26	1	5
ENSMICP00000047230	zf-C2H2	PF00096.26	2.9e-26	2	5
ENSMICP00000047230	zf-C2H2	PF00096.26	2.9e-26	3	5
ENSMICP00000047230	zf-C2H2	PF00096.26	2.9e-26	4	5
ENSMICP00000047230	zf-C2H2	PF00096.26	2.9e-26	5	5
ENSMICP00000017353	zf-C2H2	PF00096.26	3.5e-20	1	4
ENSMICP00000017353	zf-C2H2	PF00096.26	3.5e-20	2	4
ENSMICP00000017353	zf-C2H2	PF00096.26	3.5e-20	3	4
ENSMICP00000017353	zf-C2H2	PF00096.26	3.5e-20	4	4
ENSMICP00000004956	zf-C2H2	PF00096.26	5.7e-20	1	4
ENSMICP00000004956	zf-C2H2	PF00096.26	5.7e-20	2	4
ENSMICP00000004956	zf-C2H2	PF00096.26	5.7e-20	3	4
ENSMICP00000004956	zf-C2H2	PF00096.26	5.7e-20	4	4
ENSMICP00000044157	zf-C2H2	PF00096.26	1.6e-15	1	3
ENSMICP00000044157	zf-C2H2	PF00096.26	1.6e-15	2	3
ENSMICP00000044157	zf-C2H2	PF00096.26	1.6e-15	3	3
ENSMICP00000034136	zf-C2H2	PF00096.26	8.6e-14	1	3
ENSMICP00000034136	zf-C2H2	PF00096.26	8.6e-14	2	3
ENSMICP00000034136	zf-C2H2	PF00096.26	8.6e-14	3	3
ENSMICP00000047230	zf-met	PF12874.7	2.7e-11	1	1
ENSMICP00000017353	zf-met	PF12874.7	7.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000060183	PATZ1-205	309	-	ENSMICP00000042261	102 (aa)	-	UPI000BACF63F
ENSMICT00000027658	PATZ1-203	1971	-	ENSMICP00000034136	656 (aa)	-	UPI00085B3092
ENSMICT00000005436	PATZ1-202	3991	XM_012763963	ENSMICP00000004956	641 (aa)	XP_012619417	UPI000643B2A0
ENSMICT00000029824	PATZ1-204	2067	-	ENSMICP00000017353	688 (aa)	-	UPI00085AFDC3
ENSMICT00000064398	PATZ1-206	4347	XM_012763965	ENSMICP00000044157	537 (aa)	XP_012619419	UPI000642E052
ENSMICT00000064882	PATZ1-201	4131	XM_012763962	ENSMICP00000047230	687 (aa)	XP_012619416	UPI0006438B5C

Gene Model

Click here to download ENSMICG00000005430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000005430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000005430	PATZ1	75	30.723	ENSMICG00000042242	ZNF131	68	30.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000005430	PATZ1	100	99.532	ENSG00000100105	PATZ1	100	99.532	Homo_sapiens
ENSMICG00000005430	PATZ1	99	60.038	ENSAPOG00000018447	patz1	100	59.413	Acanthochromis_polyacanthus
ENSMICG00000005430	PATZ1	100	99.127	ENSAMEG00000007074	PATZ1	100	99.127	Ailuropoda_melanoleuca
ENSMICG00000005430	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSMICG00000005430	PATZ1	100	57.703	ENSAPEG00000013354	patz1	100	57.843	Amphiprion_percula
ENSMICG00000005430	PATZ1	100	62.549	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSMICG00000005430	PATZ1	85	91.610	ENSAPLG00000003934	PATZ1	99	91.438	Anas_platyrhynchos
ENSMICG00000005430	PATZ1	100	99.532	ENSANAG00000029603	PATZ1	100	99.532	Aotus_nancymaae
ENSMICG00000005430	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSMICG00000005430	PATZ1	100	99.418	ENSBTAG00000005478	PATZ1	100	99.418	Bos_taurus
ENSMICG00000005430	PATZ1	100	99.532	ENSCJAG00000010978	PATZ1	100	99.532	Callithrix_jacchus
ENSMICG00000005430	PATZ1	100	99.272	ENSCAFG00000013087	PATZ1	100	99.272	Canis_familiaris
ENSMICG00000005430	PATZ1	100	98.981	ENSCHIG00000020203	PATZ1	100	98.981	Capra_hircus
ENSMICG00000005430	PATZ1	100	99.418	ENSTSYG00000033183	PATZ1	100	99.418	Carlito_syrichta
ENSMICG00000005430	PATZ1	100	99.532	ENSCCAG00000028772	PATZ1	100	99.532	Cebus_capucinus
ENSMICG00000005430	PATZ1	100	99.532	ENSCATG00000006101	PATZ1	100	99.532	Cercocebus_atys
ENSMICG00000005430	PATZ1	100	89.275	ENSCPBG00000011277	PATZ1	100	89.420	Chrysemys_picta_bellii
ENSMICG00000005430	PATZ1	100	99.532	ENSCANG00000024972	PATZ1	100	99.532	Colobus_angolensis_palliatus
ENSMICG00000005430	PATZ1	100	96.943	ENSCGRG00001004071	Patz1	100	96.943	Cricetulus_griseus_chok1gshd
ENSMICG00000005430	PATZ1	93	97.667	ENSCGRG00000004814	Patz1	100	97.667	Cricetulus_griseus_crigri
ENSMICG00000005430	PATZ1	100	55.447	ENSCSEG00000001385	patz1	100	55.139	Cynoglossus_semilaevis
ENSMICG00000005430	PATZ1	100	59.145	ENSCVAG00000007684	patz1	100	59.440	Cyprinodon_variegatus
ENSMICG00000005430	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.663	Danio_rerio
ENSMICG00000005430	PATZ1	90	98.708	ENSDNOG00000003183	PATZ1	100	98.708	Dasypus_novemcinctus
ENSMICG00000005430	PATZ1	100	99.272	ENSDORG00000023834	Patz1	100	99.272	Dipodomys_ordii
ENSMICG00000005430	PATZ1	100	99.127	ENSECAG00000025030	PATZ1	100	99.127	Equus_caballus
ENSMICG00000005430	PATZ1	99	61.887	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSMICG00000005430	PATZ1	100	99.272	ENSFCAG00000030253	PATZ1	100	99.272	Felis_catus
ENSMICG00000005430	PATZ1	86	91.864	ENSFALG00000007450	PATZ1	99	91.823	Ficedula_albicollis
ENSMICG00000005430	PATZ1	96	97.466	ENSFDAG00000005614	PATZ1	100	97.466	Fukomys_damarensis
ENSMICG00000005430	PATZ1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSMICG00000005430	PATZ1	98	55.230	ENSGMOG00000001062	patz1	100	54.434	Gadus_morhua
ENSMICG00000005430	PATZ1	100	88.633	ENSGALG00000006934	PATZ1	100	88.777	Gallus_gallus
ENSMICG00000005430	PATZ1	100	58.915	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSMICG00000005430	PATZ1	85	92.281	ENSGAGG00000003214	PATZ1	100	92.110	Gopherus_agassizii
ENSMICG00000005430	PATZ1	100	99.688	ENSGGOG00000017171	PATZ1	100	99.688	Gorilla_gorilla
ENSMICG00000005430	PATZ1	98	62.846	ENSHCOG00000017644	patz1	93	57.988	Hippocampus_comes
ENSMICG00000005430	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	53.901	Ictalurus_punctatus
ENSMICG00000005430	PATZ1	100	98.908	ENSSTOG00000020707	PATZ1	100	98.908	Ictidomys_tridecemlineatus
ENSMICG00000005430	PATZ1	100	96.952	ENSJJAG00000015259	Patz1	100	96.952	Jaculus_jaculus
ENSMICG00000005430	PATZ1	100	57.812	ENSKMAG00000008157	patz1	100	57.768	Kryptolebias_marmoratus
ENSMICG00000005430	PATZ1	100	98.253	ENSLAFG00000002317	PATZ1	100	98.253	Loxodonta_africana
ENSMICG00000005430	PATZ1	100	99.376	ENSMFAG00000040968	PATZ1	100	99.376	Macaca_fascicularis
ENSMICG00000005430	PATZ1	100	99.376	ENSMNEG00000037588	PATZ1	100	99.376	Macaca_nemestrina
ENSMICG00000005430	PATZ1	100	99.532	ENSMLEG00000030938	PATZ1	100	99.532	Mandrillus_leucophaeus
ENSMICG00000005430	PATZ1	100	57.625	ENSMAMG00000023652	patz1	100	57.771	Mastacembelus_armatus
ENSMICG00000005430	PATZ1	85	88.034	ENSMGAG00000008439	PATZ1	100	87.863	Meleagris_gallopavo
ENSMICG00000005430	PATZ1	100	98.752	ENSMAUG00000004129	Patz1	100	98.752	Mesocricetus_auratus
ENSMICG00000005430	PATZ1	100	98.596	ENSMOCG00000014488	Patz1	100	98.596	Microtus_ochrogaster
ENSMICG00000005430	PATZ1	99	55.469	ENSMMOG00000021679	patz1	100	55.044	Mola_mola
ENSMICG00000005430	PATZ1	100	57.001	ENSMALG00000021172	patz1	100	56.719	Monopterus_albus
ENSMICG00000005430	PATZ1	100	98.596	MGP_CAROLIEiJ_G0016007	Patz1	100	98.596	Mus_caroli
ENSMICG00000005430	PATZ1	100	98.752	ENSMUSG00000020453	Patz1	100	98.752	Mus_musculus
ENSMICG00000005430	PATZ1	100	98.752	MGP_PahariEiJ_G0016884	Patz1	100	98.752	Mus_pahari
ENSMICG00000005430	PATZ1	100	98.752	MGP_SPRETEiJ_G0016846	Patz1	100	98.752	Mus_spretus
ENSMICG00000005430	PATZ1	100	98.981	ENSMLUG00000009942	PATZ1	100	98.981	Myotis_lucifugus
ENSMICG00000005430	PATZ1	100	99.064	ENSNGAG00000010268	Patz1	100	99.064	Nannospalax_galili
ENSMICG00000005430	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSMICG00000005430	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSMICG00000005430	PATZ1	100	98.399	ENSODEG00000003589	PATZ1	100	98.399	Octodon_degus
ENSMICG00000005430	PATZ1	100	59.064	ENSONIG00000004248	patz1	100	58.712	Oreochromis_niloticus
ENSMICG00000005430	PATZ1	100	93.469	ENSOANG00000014654	PATZ1	100	93.759	Ornithorhynchus_anatinus
ENSMICG00000005430	PATZ1	100	58.931	ENSORLG00020010937	patz1	100	58.779	Oryzias_latipes_hni
ENSMICG00000005430	PATZ1	100	58.297	ENSORLG00015007396	patz1	100	58.150	Oryzias_latipes_hsok
ENSMICG00000005430	PATZ1	100	57.903	ENSOMEG00000006636	patz1	100	57.755	Oryzias_melastigma
ENSMICG00000005430	PATZ1	100	99.272	ENSOGAG00000027905	PATZ1	100	99.272	Otolemur_garnettii
ENSMICG00000005430	PATZ1	100	99.688	ENSPPAG00000033227	PATZ1	100	99.688	Pan_paniscus
ENSMICG00000005430	PATZ1	100	99.272	ENSPPRG00000001573	PATZ1	100	99.272	Panthera_pardus
ENSMICG00000005430	PATZ1	86	99.325	ENSPTIG00000007937	PATZ1	91	99.325	Panthera_tigris_altaica
ENSMICG00000005430	PATZ1	100	99.688	ENSPTRG00000014268	PATZ1	100	99.688	Pan_troglodytes
ENSMICG00000005430	PATZ1	100	99.532	ENSPANG00000006821	PATZ1	100	99.418	Papio_anubis
ENSMICG00000005430	PATZ1	100	62.500	ENSPKIG00000019584	patz1	100	61.754	Paramormyrops_kingsleyae
ENSMICG00000005430	PATZ1	60	83.777	ENSPSIG00000016553	-	91	83.535	Pelodiscus_sinensis
ENSMICG00000005430	PATZ1	58	95.960	ENSPSIG00000011562	-	100	96.286	Pelodiscus_sinensis
ENSMICG00000005430	PATZ1	100	56.983	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSMICG00000005430	PATZ1	100	98.752	ENSPEMG00000005321	Patz1	100	98.752	Peromyscus_maniculatus_bairdii
ENSMICG00000005430	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSMICG00000005430	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSMICG00000005430	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.044	Poecilia_reticulata
ENSMICG00000005430	PATZ1	100	99.272	ENSPPYG00000011732	PATZ1	100	99.272	Pongo_abelii
ENSMICG00000005430	PATZ1	100	99.854	ENSPCOG00000019729	PATZ1	100	99.854	Propithecus_coquereli
ENSMICG00000005430	PATZ1	100	99.418	ENSPVAG00000001749	PATZ1	100	99.418	Pteropus_vampyrus
ENSMICG00000005430	PATZ1	100	59.384	ENSPNYG00000013542	patz1	100	59.187	Pundamilia_nyererei
ENSMICG00000005430	PATZ1	84	60.130	ENSPNAG00000017222	patz1	99	59.903	Pygocentrus_nattereri
ENSMICG00000005430	PATZ1	100	99.532	ENSRBIG00000044231	PATZ1	100	99.532	Rhinopithecus_bieti
ENSMICG00000005430	PATZ1	100	99.532	ENSRROG00000037155	PATZ1	100	99.532	Rhinopithecus_roxellana
ENSMICG00000005430	PATZ1	100	99.532	ENSSBOG00000003894	PATZ1	100	99.532	Saimiri_boliviensis_boliviensis
ENSMICG00000005430	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSMICG00000005430	PATZ1	100	87.340	ENSSPUG00000015298	PATZ1	100	86.913	Sphenodon_punctatus
ENSMICG00000005430	PATZ1	85	98.797	ENSSSCG00000010027	PATZ1	100	98.797	Sus_scrofa
ENSMICG00000005430	PATZ1	100	57.967	ENSTRUG00000015366	patz1	100	57.655	Takifugu_rubripes
ENSMICG00000005430	PATZ1	100	99.127	ENSTTRG00000010279	PATZ1	100	99.127	Tursiops_truncatus
ENSMICG00000005430	PATZ1	100	99.220	ENSUAMG00000015014	PATZ1	100	99.220	Ursus_americanus
ENSMICG00000005430	PATZ1	100	73.188	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSMICG00000005430	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus