EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000005550 (Gene tree)
Gene ID: 105870649
Gene Symbol: DDX56
Alias: NOH61
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 9057 bases
Position: chr11:97132345-97141401
Accession: 105870649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000005060	ResIII	PF04851.15	4.3e-08	1	1
ENSMICP00000039773	ResIII	PF04851.15	4.9e-08	1	1
ENSMICP00000005060	DEAD	PF00270.29	4.8e-39	1	1
ENSMICP00000039773	DEAD	PF00270.29	5.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000029970	DDX56-201	2512	XM_012763370	ENSMICP00000039773	547 (aa)	XP_012618824	UPI0006434926
ENSMICT00000005548	DDX56-202	1524	-	ENSMICP00000005060	507 (aa)	-	UPI000C2EA8AE

Gene Model

Click here to download ENSMICG00000005550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000005550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000005550	DDX56	66	30.172	ENSMICG00000017145	DDX43	64	30.172
ENSMICG00000005550	DDX56	71	30.245	ENSMICG00000004290	-	63	30.366
ENSMICG00000005550	DDX56	50	30.037	ENSMICG00000010086	DDX47	77	32.645
ENSMICG00000005550	DDX56	71	30.027	ENSMICG00000049007	-	91	30.205
ENSMICG00000005550	DDX56	67	30.946	ENSMICG00000011946	-	83	30.946
ENSMICG00000005550	DDX56	65	30.789	ENSMICG00000037047	DDX51	59	30.789
ENSMICG00000005550	DDX56	69	31.070	ENSMICG00000047072	-	52	32.584
ENSMICG00000005550	DDX56	50	36.301	ENSMICG00000003640	DDX49	58	36.301
ENSMICG00000005550	DDX56	73	30.809	ENSMICG00000035071	DDX10	53	30.208
ENSMICG00000005550	DDX56	68	30.295	ENSMICG00000000259	DDX19A	75	30.295
ENSMICG00000005550	DDX56	71	30.108	ENSMICG00000045127	-	88	30.270
ENSMICG00000005550	DDX56	71	31.383	ENSMICG00000011519	DDX6	74	31.915
ENSMICG00000005550	DDX56	70	30.053	ENSMICG00000044243	-	90	30.053
ENSMICG00000005550	DDX56	68	30.563	ENSMICG00000046042	-	77	30.563
ENSMICG00000005550	DDX56	68	30.400	ENSMICG00000032772	DDX3X	56	30.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000005550	DDX56	100	95.464	ENSG00000136271	DDX56	100	97.067	Homo_sapiens
ENSMICG00000005550	DDX56	98	64.493	ENSAPOG00000017113	ddx56	98	64.855	Acanthochromis_polyacanthus
ENSMICG00000005550	DDX56	100	90.494	ENSAMEG00000017711	DDX56	100	90.859	Ailuropoda_melanoleuca
ENSMICG00000005550	DDX56	92	59.725	ENSACIG00000013747	ddx56	98	66.484	Amphilophus_citrinellus
ENSMICG00000005550	DDX56	88	67.146	ENSAOCG00000015447	-	87	67.146	Amphiprion_ocellaris
ENSMICG00000005550	DDX56	97	64.074	ENSAOCG00000018059	ddx56	99	64.074	Amphiprion_ocellaris
ENSMICG00000005550	DDX56	99	64.158	ENSAPEG00000007267	ddx56	99	64.158	Amphiprion_percula
ENSMICG00000005550	DDX56	98	64.130	ENSATEG00000005279	ddx56	98	64.909	Anabas_testudineus
ENSMICG00000005550	DDX56	98	63.702	ENSACLG00000020113	ddx56	98	64.247	Astatotilapia_calliptera
ENSMICG00000005550	DDX56	99	61.141	ENSAMXG00000019357	ddx56	99	61.676	Astyanax_mexicanus
ENSMICG00000005550	DDX56	100	92.870	ENSBTAG00000010602	DDX56	100	93.236	Bos_taurus
ENSMICG00000005550	DDX56	97	40.426	WBGene00016073	C24H12.4	87	40.426	Caenorhabditis_elegans
ENSMICG00000005550	DDX56	100	95.069	ENSCJAG00000012233	DDX56	100	95.069	Callithrix_jacchus
ENSMICG00000005550	DDX56	82	88.591	ENSCAFG00000029295	DDX56	100	89.038	Canis_familiaris
ENSMICG00000005550	DDX56	100	86.131	ENSCAFG00020019695	DDX56	100	86.131	Canis_lupus_dingo
ENSMICG00000005550	DDX56	100	92.870	ENSCHIG00000014261	DDX56	100	92.870	Capra_hircus
ENSMICG00000005550	DDX56	100	94.881	ENSTSYG00000008048	DDX56	100	94.881	Carlito_syrichta
ENSMICG00000005550	DDX56	86	89.873	ENSCAPG00000006286	DDX56	99	89.873	Cavia_aperea
ENSMICG00000005550	DDX56	100	90.164	ENSCPOG00000003359	DDX56	100	90.164	Cavia_porcellus
ENSMICG00000005550	DDX56	100	94.477	ENSCCAG00000025303	DDX56	100	94.477	Cebus_capucinus
ENSMICG00000005550	DDX56	100	95.266	ENSCATG00000039389	DDX56	100	95.266	Cercocebus_atys
ENSMICG00000005550	DDX56	100	92.139	ENSCLAG00000007666	DDX56	100	92.139	Chinchilla_lanigera
ENSMICG00000005550	DDX56	100	95.795	ENSCSAG00000015636	DDX56	100	95.795	Chlorocebus_sabaeus
ENSMICG00000005550	DDX56	98	69.399	ENSCPBG00000024556	DDX56	98	69.399	Chrysemys_picta_bellii
ENSMICG00000005550	DDX56	91	56.746	ENSCING00000005185	-	97	56.944	Ciona_intestinalis
ENSMICG00000005550	DDX56	91	54.851	ENSCSAVG00000011266	-	99	54.851	Ciona_savignyi
ENSMICG00000005550	DDX56	100	95.069	ENSCANG00000028187	DDX56	100	95.069	Colobus_angolensis_palliatus
ENSMICG00000005550	DDX56	100	91.225	ENSCGRG00001019019	Ddx56	100	91.225	Cricetulus_griseus_chok1gshd
ENSMICG00000005550	DDX56	100	91.225	ENSCGRG00000011870	Ddx56	100	91.225	Cricetulus_griseus_crigri
ENSMICG00000005550	DDX56	98	64.695	ENSCSEG00000008368	ddx56	99	64.695	Cynoglossus_semilaevis
ENSMICG00000005550	DDX56	99	65.045	ENSCVAG00000006499	ddx56	99	65.586	Cyprinodon_variegatus
ENSMICG00000005550	DDX56	98	64.014	ENSDARG00000020913	ddx56	99	65.099	Danio_rerio
ENSMICG00000005550	DDX56	86	89.831	ENSDNOG00000036526	DDX56	99	89.831	Dasypus_novemcinctus
ENSMICG00000005550	DDX56	99	47.187	FBgn0001565	Hlc	98	47.187	Drosophila_melanogaster
ENSMICG00000005550	DDX56	87	61.684	ENSETEG00000019559	-	100	60.842	Echinops_telfairi
ENSMICG00000005550	DDX56	83	80.296	ENSETEG00000002969	-	83	80.296	Echinops_telfairi
ENSMICG00000005550	DDX56	98	58.739	ENSEBUG00000009986	ddx56	99	59.279	Eptatretus_burgeri
ENSMICG00000005550	DDX56	100	92.322	ENSEASG00005017795	DDX56	100	93.419	Equus_asinus_asinus
ENSMICG00000005550	DDX56	100	92.505	ENSECAG00000019897	DDX56	100	93.688	Equus_caballus
ENSMICG00000005550	DDX56	86	90.890	ENSEEUG00000004849	DDX56	99	90.890	Erinaceus_europaeus
ENSMICG00000005550	DDX56	97	66.421	ENSELUG00000004150	ddx56	97	67.159	Esox_lucius
ENSMICG00000005550	DDX56	99	89.921	ENSFCAG00000010261	DDX56	99	90.514	Felis_catus
ENSMICG00000005550	DDX56	100	90.859	ENSFDAG00000007128	DDX56	100	90.859	Fukomys_damarensis
ENSMICG00000005550	DDX56	98	64.576	ENSFHEG00000018008	ddx56	98	65.746	Fundulus_heteroclitus
ENSMICG00000005550	DDX56	99	61.835	ENSGAFG00000006906	ddx56	98	61.835	Gambusia_affinis
ENSMICG00000005550	DDX56	93	71.899	ENSGAGG00000006789	DDX56	92	71.899	Gopherus_agassizii
ENSMICG00000005550	DDX56	100	95.464	ENSGGOG00000012031	DDX56	100	95.464	Gorilla_gorilla
ENSMICG00000005550	DDX56	95	59.813	ENSHBUG00000015246	ddx56	92	61.822	Haplochromis_burtoni
ENSMICG00000005550	DDX56	100	91.773	ENSHGLG00000017271	DDX56	100	91.773	Heterocephalus_glaber_female
ENSMICG00000005550	DDX56	100	91.773	ENSHGLG00100015731	DDX56	100	91.773	Heterocephalus_glaber_male
ENSMICG00000005550	DDX56	97	64.259	ENSHCOG00000001685	ddx56	97	64.259	Hippocampus_comes
ENSMICG00000005550	DDX56	99	62.278	ENSIPUG00000006602	ddx56	98	62.278	Ictalurus_punctatus
ENSMICG00000005550	DDX56	100	91.590	ENSSTOG00000000464	DDX56	100	91.590	Ictidomys_tridecemlineatus
ENSMICG00000005550	DDX56	99	90.424	ENSJJAG00000014269	Ddx56	100	90.424	Jaculus_jaculus
ENSMICG00000005550	DDX56	98	63.410	ENSKMAG00000016611	ddx56	98	64.865	Kryptolebias_marmoratus
ENSMICG00000005550	DDX56	97	63.534	ENSLBEG00000026281	ddx56	98	63.910	Labrus_bergylta
ENSMICG00000005550	DDX56	97	67.035	ENSLACG00000015551	DDX56	97	67.514	Latimeria_chalumnae
ENSMICG00000005550	DDX56	99	63.428	ENSLOCG00000015185	ddx56	99	64.286	Lepisosteus_oculatus
ENSMICG00000005550	DDX56	99	92.237	ENSLAFG00000018206	DDX56	99	92.237	Loxodonta_africana
ENSMICG00000005550	DDX56	100	95.266	ENSMFAG00000041001	DDX56	100	95.266	Macaca_fascicularis
ENSMICG00000005550	DDX56	100	95.266	ENSMMUG00000002645	DDX56	100	95.266	Macaca_mulatta
ENSMICG00000005550	DDX56	100	95.464	ENSMNEG00000028492	DDX56	100	95.464	Macaca_nemestrina
ENSMICG00000005550	DDX56	100	95.266	ENSMLEG00000043591	DDX56	100	95.266	Mandrillus_leucophaeus
ENSMICG00000005550	DDX56	97	64.663	ENSMAMG00000007776	ddx56	97	65.027	Mastacembelus_armatus
ENSMICG00000005550	DDX56	98	63.702	ENSMZEG00005009813	ddx56	98	64.247	Maylandia_zebra
ENSMICG00000005550	DDX56	100	90.494	ENSMOCG00000016782	Ddx56	100	90.494	Microtus_ochrogaster
ENSMICG00000005550	DDX56	93	66.346	ENSMMOG00000009654	ddx56	95	68.182	Mola_mola
ENSMICG00000005550	DDX56	100	75.725	ENSMODG00000016137	DDX56	100	75.725	Monodelphis_domestica
ENSMICG00000005550	DDX56	68	64.343	ENSMALG00000016910	ddx56	99	64.343	Monopterus_albus
ENSMICG00000005550	DDX56	100	90.859	MGP_CAROLIEiJ_G0016069	Ddx56	100	90.859	Mus_caroli
ENSMICG00000005550	DDX56	100	90.859	ENSMUSG00000004393	Ddx56	100	90.859	Mus_musculus
ENSMICG00000005550	DDX56	100	90.494	MGP_PahariEiJ_G0016822	Ddx56	100	90.494	Mus_pahari
ENSMICG00000005550	DDX56	100	90.859	MGP_SPRETEiJ_G0016911	Ddx56	100	90.859	Mus_spretus
ENSMICG00000005550	DDX56	100	88.848	ENSMPUG00000018196	DDX56	88	88.848	Mustela_putorius_furo
ENSMICG00000005550	DDX56	100	91.408	ENSMLUG00000003509	DDX56	100	91.956	Myotis_lucifugus
ENSMICG00000005550	DDX56	100	91.590	ENSNGAG00000018785	Ddx56	100	91.590	Nannospalax_galili
ENSMICG00000005550	DDX56	91	67.653	ENSNBRG00000002656	ddx56	92	67.015	Neolamprologus_brichardi
ENSMICG00000005550	DDX56	100	95.464	ENSNLEG00000003816	DDX56	100	95.464	Nomascus_leucogenys
ENSMICG00000005550	DDX56	91	78.024	ENSMEUG00000006788	DDX56	100	78.024	Notamacropus_eugenii
ENSMICG00000005550	DDX56	100	89.397	ENSOPRG00000000292	-	100	89.397	Ochotona_princeps
ENSMICG00000005550	DDX56	69	95.200	ENSODEG00000014807	DDX56	100	95.200	Octodon_degus
ENSMICG00000005550	DDX56	98	65.794	ENSONIG00000011509	ddx56	98	65.794	Oreochromis_niloticus
ENSMICG00000005550	DDX56	97	69.794	ENSOANG00000006320	-	100	70.356	Ornithorhynchus_anatinus
ENSMICG00000005550	DDX56	73	71.072	ENSOANG00000015987	-	94	71.883	Ornithorhynchus_anatinus
ENSMICG00000005550	DDX56	100	89.945	ENSOCUG00000022918	DDX56	100	89.945	Oryctolagus_cuniculus
ENSMICG00000005550	DDX56	99	65.642	ENSORLG00000001434	ddx56	99	65.642	Oryzias_latipes
ENSMICG00000005550	DDX56	99	65.823	ENSORLG00020015718	ddx56	95	65.823	Oryzias_latipes_hni
ENSMICG00000005550	DDX56	99	65.642	ENSORLG00015003004	ddx56	95	65.642	Oryzias_latipes_hsok
ENSMICG00000005550	DDX56	98	65.699	ENSOMEG00000022072	ddx56	98	66.184	Oryzias_melastigma
ENSMICG00000005550	DDX56	100	94.881	ENSOGAG00000009981	DDX56	100	94.881	Otolemur_garnettii
ENSMICG00000005550	DDX56	100	93.053	ENSOARG00000015240	DDX56	100	93.053	Ovis_aries
ENSMICG00000005550	DDX56	100	77.231	ENSPPAG00000031263	-	100	77.049	Pan_paniscus
ENSMICG00000005550	DDX56	100	91.187	ENSPPAG00000029147	DDX56	100	91.187	Pan_paniscus
ENSMICG00000005550	DDX56	99	90.316	ENSPPRG00000014594	DDX56	99	90.316	Panthera_pardus
ENSMICG00000005550	DDX56	86	87.261	ENSPTIG00000019500	DDX56	92	87.898	Panthera_tigris_altaica
ENSMICG00000005550	DDX56	100	95.069	ENSPTRG00000019147	DDX56	100	95.069	Pan_troglodytes
ENSMICG00000005550	DDX56	94	79.537	ENSPTRG00000052765	-	100	79.344	Pan_troglodytes
ENSMICG00000005550	DDX56	100	95.266	ENSPANG00000002446	DDX56	100	95.266	Papio_anubis
ENSMICG00000005550	DDX56	98	64.674	ENSPKIG00000018998	ddx56	98	64.674	Paramormyrops_kingsleyae
ENSMICG00000005550	DDX56	94	66.412	ENSPMGG00000017421	ddx56	97	66.412	Periophthalmus_magnuspinnatus
ENSMICG00000005550	DDX56	100	84.570	ENSPCIG00000009336	DDX56	100	84.570	Phascolarctos_cinereus
ENSMICG00000005550	DDX56	99	64.195	ENSPFOG00000018658	ddx56	97	65.082	Poecilia_formosa
ENSMICG00000005550	DDX56	99	64.195	ENSPLAG00000019208	ddx56	97	65.082	Poecilia_latipinna
ENSMICG00000005550	DDX56	99	64.195	ENSPMEG00000001775	ddx56	97	65.082	Poecilia_mexicana
ENSMICG00000005550	DDX56	99	64.154	ENSPREG00000015142	ddx56	98	64.154	Poecilia_reticulata
ENSMICG00000005550	DDX56	100	95.612	ENSPPYG00000017591	DDX56	100	95.612	Pongo_abelii
ENSMICG00000005550	DDX56	96	90.512	ENSPCAG00000011499	DDX56	100	90.512	Procavia_capensis
ENSMICG00000005550	DDX56	100	97.633	ENSPCOG00000024864	DDX56	100	97.633	Propithecus_coquereli
ENSMICG00000005550	DDX56	88	93.488	ENSPVAG00000000791	DDX56	88	93.488	Pteropus_vampyrus
ENSMICG00000005550	DDX56	98	63.521	ENSPNYG00000019212	ddx56	98	64.065	Pundamilia_nyererei
ENSMICG00000005550	DDX56	97	64.112	ENSPNAG00000025446	ddx56	99	64.545	Pygocentrus_nattereri
ENSMICG00000005550	DDX56	100	91.225	ENSRNOG00000004670	Ddx56	100	91.225	Rattus_norvegicus
ENSMICG00000005550	DDX56	100	95.464	ENSRBIG00000030140	DDX56	100	95.464	Rhinopithecus_bieti
ENSMICG00000005550	DDX56	100	95.069	ENSRROG00000044428	DDX56	100	95.069	Rhinopithecus_roxellana
ENSMICG00000005550	DDX56	95	45.045	YLR276C	-	97	42.393	Saccharomyces_cerevisiae
ENSMICG00000005550	DDX56	100	94.516	ENSSBOG00000034339	DDX56	100	94.516	Saimiri_boliviensis_boliviensis
ENSMICG00000005550	DDX56	86	84.322	ENSSHAG00000016615	DDX56	99	84.322	Sarcophilus_harrisii
ENSMICG00000005550	DDX56	98	65.876	ENSSFOG00015012795	ddx56	97	65.876	Scleropages_formosus
ENSMICG00000005550	DDX56	99	64.286	ENSSMAG00000011280	ddx56	99	64.286	Scophthalmus_maximus
ENSMICG00000005550	DDX56	99	64.273	ENSSDUG00000023597	ddx56	98	65.225	Seriola_dumerili
ENSMICG00000005550	DDX56	99	64.273	ENSSLDG00000018369	ddx56	98	65.225	Seriola_lalandi_dorsalis
ENSMICG00000005550	DDX56	75	90.000	ENSSARG00000014363	DDX56	80	89.503	Sorex_araneus
ENSMICG00000005550	DDX56	99	69.287	ENSSPUG00000000784	DDX56	96	69.287	Sphenodon_punctatus
ENSMICG00000005550	DDX56	92	67.515	ENSSPAG00000009392	ddx56	95	67.698	Stegastes_partitus
ENSMICG00000005550	DDX56	100	92.896	ENSSSCG00000016745	DDX56	100	92.896	Sus_scrofa
ENSMICG00000005550	DDX56	99	64.338	ENSTRUG00000018623	ddx56	99	64.338	Takifugu_rubripes
ENSMICG00000005550	DDX56	98	62.075	ENSTNIG00000013593	ddx56	98	62.433	Tetraodon_nigroviridis
ENSMICG00000005550	DDX56	100	91.225	ENSTBEG00000007119	DDX56	100	91.225	Tupaia_belangeri
ENSMICG00000005550	DDX56	86	91.737	ENSTTRG00000010552	DDX56	99	92.161	Tursiops_truncatus
ENSMICG00000005550	DDX56	100	90.494	ENSUAMG00000014194	DDX56	100	90.859	Ursus_americanus
ENSMICG00000005550	DDX56	100	90.494	ENSUMAG00000009666	DDX56	100	90.859	Ursus_maritimus
ENSMICG00000005550	DDX56	100	89.031	ENSVVUG00000011905	DDX56	100	89.397	Vulpes_vulpes
ENSMICG00000005550	DDX56	99	64.580	ENSXETG00000019000	ddx56	98	66.606	Xenopus_tropicalis
ENSMICG00000005550	DDX56	99	63.822	ENSXCOG00000017413	ddx56	98	63.822	Xiphophorus_couchianus
ENSMICG00000005550	DDX56	99	63.949	ENSXMAG00000018749	ddx56	99	63.787	Xiphophorus_maculatus