EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000006364 (Gene tree)
Gene ID: 105864706
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 10069 bases
Position: chr3:73721809-73731877
Accession: 105864706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000026878	RRM_1	PF00076.22	3.9e-35	1	2
ENSMICP00000026878	RRM_1	PF00076.22	3.9e-35	2	2
ENSMICP00000005804	RRM_1	PF00076.22	4.3e-35	1	2
ENSMICP00000005804	RRM_1	PF00076.22	4.3e-35	2	2
ENSMICP00000022504	RRM_1	PF00076.22	4.5e-35	1	2
ENSMICP00000022504	RRM_1	PF00076.22	4.5e-35	2	2
ENSMICP00000046559	RRM_1	PF00076.22	5e-35	1	2
ENSMICP00000046559	RRM_1	PF00076.22	5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000006361	RBM23-204	795	-	ENSMICP00000005804	264 (aa)	-	UPI000C2EA7A7
ENSMICT00000045890	RBM23-202	1281	-	ENSMICP00000022504	426 (aa)	-	UPI000C2ECD25
ENSMICT00000027541	RBM23-203	1227	-	ENSMICP00000026878	408 (aa)	-	UPI000C2ED65B
ENSMICT00000070021	RBM23-201	4147	XM_012752693	ENSMICP00000046559	442 (aa)	XP_012608147	UPI000642E58D

Gene Model

Click here to download ENSMICG00000006364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000006364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000006364	RBM23	58	34.328	ENSMICG00000010984	HNRNPD	59	33.824
ENSMICG00000006364	RBM23	67	42.500	ENSMICG00000011830	PABPC3	60	42.500
ENSMICG00000006364	RBM23	65	37.500	ENSMICG00000029683	PABPC4L	95	37.500
ENSMICG00000006364	RBM23	57	30.864	ENSMICG00000027030	HNRNPAB	56	30.864
ENSMICG00000006364	RBM23	84	30.882	ENSMICG00000037857	TIAL1	80	30.882
ENSMICG00000006364	RBM23	57	37.097	ENSMICG00000013598	-	59	36.667
ENSMICG00000006364	RBM23	86	30.000	ENSMICG00000016528	ELAVL3	87	37.500
ENSMICG00000006364	RBM23	85	32.000	ENSMICG00000016633	-	69	40.000
ENSMICG00000006364	RBM23	59	44.444	ENSMICG00000047642	-	80	44.444
ENSMICG00000006364	RBM23	62	36.111	ENSMICG00000001558	ELAVL2	80	36.111
ENSMICG00000006364	RBM23	64	41.667	ENSMICG00000009121	PABPC1	68	41.667
ENSMICG00000006364	RBM23	61	35.443	ENSMICG00000032477	HNRNPA1	57	35.443
ENSMICG00000006364	RBM23	51	44.898	ENSMICG00000030570	HNRNPA2B1	55	44.898
ENSMICG00000006364	RBM23	68	30.337	ENSMICG00000003286	ELAVL4	86	36.111
ENSMICG00000006364	RBM23	99	73.034	ENSMICG00000001668	RBM39	74	72.659
ENSMICG00000006364	RBM23	91	60.956	ENSMICG00000035049	-	71	52.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000006364	RBM23	100	95.167	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSMICG00000006364	RBM23	100	92.754	ENSAMEG00000007322	RBM23	100	89.800	Ailuropoda_melanoleuca
ENSMICG00000006364	RBM23	100	84.727	ENSACAG00000001569	RBM23	96	72.345	Anolis_carolinensis
ENSMICG00000006364	RBM23	100	77.273	ENSANAG00000033790	-	100	71.041	Aotus_nancymaae
ENSMICG00000006364	RBM23	60	85.030	ENSANAG00000031466	-	93	82.635	Aotus_nancymaae
ENSMICG00000006364	RBM23	100	90.647	ENSBTAG00000038333	RBM23	100	86.609	Bos_taurus
ENSMICG00000006364	RBM23	100	94.074	ENSCJAG00000008482	RBM23	100	85.268	Callithrix_jacchus
ENSMICG00000006364	RBM23	100	87.037	ENSCAFG00000011217	RBM23	100	85.185	Canis_familiaris
ENSMICG00000006364	RBM23	100	92.701	ENSCAFG00020007711	RBM23	100	90.828	Canis_lupus_dingo
ENSMICG00000006364	RBM23	100	91.727	ENSCHIG00000025709	RBM23	100	86.825	Capra_hircus
ENSMICG00000006364	RBM23	100	96.629	ENSTSYG00000014755	RBM23	100	96.629	Carlito_syrichta
ENSMICG00000006364	RBM23	100	82.197	ENSCCAG00000028584	-	100	82.197	Cebus_capucinus
ENSMICG00000006364	RBM23	100	95.911	ENSCCAG00000025114	-	100	87.696	Cebus_capucinus
ENSMICG00000006364	RBM23	100	95.539	ENSCATG00000017832	RBM23	100	93.091	Cercocebus_atys
ENSMICG00000006364	RBM23	100	94.834	ENSCSAG00000016213	RBM23	100	90.200	Chlorocebus_sabaeus
ENSMICG00000006364	RBM23	53	97.857	ENSCHOG00000004460	-	51	97.468	Choloepus_hoffmanni
ENSMICG00000006364	RBM23	100	81.413	ENSCPBG00000026096	RBM23	96	73.598	Chrysemys_picta_bellii
ENSMICG00000006364	RBM23	100	95.926	ENSCANG00000001893	RBM23	100	89.286	Colobus_angolensis_palliatus
ENSMICG00000006364	RBM23	100	92.565	ENSDNOG00000032457	RBM23	100	88.914	Dasypus_novemcinctus
ENSMICG00000006364	RBM23	100	94.424	ENSDORG00000004926	-	100	93.680	Dipodomys_ordii
ENSMICG00000006364	RBM23	53	82.143	ENSETEG00000017915	-	87	80.000	Echinops_telfairi
ENSMICG00000006364	RBM23	100	92.674	ENSEASG00005011696	RBM23	95	89.977	Equus_asinus_asinus
ENSMICG00000006364	RBM23	100	93.773	ENSECAG00000009910	RBM23	100	88.453	Equus_caballus
ENSMICG00000006364	RBM23	100	87.956	ENSEEUG00000015560	RBM23	100	86.130	Erinaceus_europaeus
ENSMICG00000006364	RBM23	100	94.161	ENSFCAG00000006632	RBM23	100	90.073	Felis_catus
ENSMICG00000006364	RBM23	50	69.697	ENSGAGG00000003171	-	85	71.429	Gopherus_agassizii
ENSMICG00000006364	RBM23	100	96.629	ENSGGOG00000015707	RBM23	100	90.337	Gorilla_gorilla
ENSMICG00000006364	RBM23	100	86.989	ENSHGLG00100006114	RBM23	99	83.258	Heterocephalus_glaber_male
ENSMICG00000006364	RBM23	100	95.896	ENSSTOG00000010354	RBM23	100	95.896	Ictidomys_tridecemlineatus
ENSMICG00000006364	RBM23	100	87.956	ENSLAFG00000018567	RBM23	100	87.248	Loxodonta_africana
ENSMICG00000006364	RBM23	100	95.203	ENSMFAG00000037595	RBM23	100	90.646	Macaca_fascicularis
ENSMICG00000006364	RBM23	100	95.203	ENSMMUG00000018381	RBM23	100	89.532	Macaca_mulatta
ENSMICG00000006364	RBM23	100	95.896	ENSMNEG00000042442	RBM23	100	91.031	Macaca_nemestrina
ENSMICG00000006364	RBM23	100	89.011	ENSMLEG00000039954	RBM23	100	86.667	Mandrillus_leucophaeus
ENSMICG00000006364	RBM23	100	94.052	ENSMODG00000024448	RBM23	100	90.423	Monodelphis_domestica
ENSMICG00000006364	RBM23	100	93.818	ENSMPUG00000007151	RBM23	100	90.625	Mustela_putorius_furo
ENSMICG00000006364	RBM23	100	88.390	ENSMLUG00000012923	RBM23	100	80.674	Myotis_lucifugus
ENSMICG00000006364	RBM23	100	95.221	ENSNLEG00000014792	RBM23	100	89.556	Nomascus_leucogenys
ENSMICG00000006364	RBM23	74	97.810	ENSMEUG00000014548	-	59	97.810	Notamacropus_eugenii
ENSMICG00000006364	RBM23	100	89.338	ENSOPRG00000001092	RBM23	100	86.742	Ochotona_princeps
ENSMICG00000006364	RBM23	71	54.286	ENSOANG00000008908	-	100	54.082	Ornithorhynchus_anatinus
ENSMICG00000006364	RBM23	100	93.015	ENSOCUG00000002006	RBM23	100	87.696	Oryctolagus_cuniculus
ENSMICG00000006364	RBM23	99	89.399	ENSOGAG00000014794	RBM23	100	81.678	Otolemur_garnettii
ENSMICG00000006364	RBM23	100	90.647	ENSOARG00000019398	RBM23	100	85.961	Ovis_aries
ENSMICG00000006364	RBM23	100	94.118	ENSPPAG00000037922	RBM23	100	89.171	Pan_paniscus
ENSMICG00000006364	RBM23	100	94.161	ENSPPRG00000023344	RBM23	100	89.831	Panthera_pardus
ENSMICG00000006364	RBM23	100	94.161	ENSPTIG00000007831	RBM23	100	87.703	Panthera_tigris_altaica
ENSMICG00000006364	RBM23	100	93.382	ENSPTRG00000006151	RBM23	100	88.889	Pan_troglodytes
ENSMICG00000006364	RBM23	100	94.485	ENSPANG00000001324	RBM23	100	94.485	Papio_anubis
ENSMICG00000006364	RBM23	100	94.052	ENSPCIG00000027773	RBM23	100	89.404	Phascolarctos_cinereus
ENSMICG00000006364	RBM23	100	96.283	ENSPPYG00000005649	RBM23	100	90.719	Pongo_abelii
ENSMICG00000006364	RBM23	92	83.200	ENSPCAG00000006669	RBM23	100	70.093	Procavia_capensis
ENSMICG00000006364	RBM23	100	98.127	ENSPCOG00000018564	RBM23	100	98.127	Propithecus_coquereli
ENSMICG00000006364	RBM23	100	93.309	ENSPVAG00000013785	RBM23	100	88.939	Pteropus_vampyrus
ENSMICG00000006364	RBM23	100	95.203	ENSRBIG00000039276	RBM23	100	89.532	Rhinopithecus_bieti
ENSMICG00000006364	RBM23	100	95.203	ENSRROG00000044026	RBM23	100	89.532	Rhinopithecus_roxellana
ENSMICG00000006364	RBM23	95	77.778	ENSSBOG00000034977	-	73	75.254	Saimiri_boliviensis_boliviensis
ENSMICG00000006364	RBM23	100	98.592	ENSSBOG00000023037	-	100	88.254	Saimiri_boliviensis_boliviensis
ENSMICG00000006364	RBM23	100	94.052	ENSSHAG00000012932	RBM23	100	88.300	Sarcophilus_harrisii
ENSMICG00000006364	RBM23	100	89.532	ENSSARG00000005165	RBM23	100	88.419	Sorex_araneus
ENSMICG00000006364	RBM23	100	82.117	ENSSPUG00000000489	RBM23	96	71.622	Sphenodon_punctatus
ENSMICG00000006364	RBM23	100	94.834	ENSSSCG00000026700	RBM23	100	88.140	Sus_scrofa
ENSMICG00000006364	RBM23	100	84.768	ENSTBEG00000011543	RBM23	100	85.210	Tupaia_belangeri
ENSMICG00000006364	RBM23	100	95.167	ENSTTRG00000001500	RBM23	100	89.819	Tursiops_truncatus
ENSMICG00000006364	RBM23	100	94.526	ENSUAMG00000008524	RBM23	100	90.828	Ursus_americanus
ENSMICG00000006364	RBM23	100	94.526	ENSUMAG00000014075	RBM23	100	90.828	Ursus_maritimus
ENSMICG00000006364	RBM23	53	97.857	ENSVPAG00000000599	-	58	97.159	Vicugna_pacos
ENSMICG00000006364	RBM23	100	93.066	ENSVVUG00000019815	RBM23	100	91.051	Vulpes_vulpes
ENSMICG00000006364	RBM23	100	77.574	ENSXETG00000022623	rbm23	100	63.781	Xenopus_tropicalis