EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000006414 (Gene tree)
Gene ID: 105874242
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 14149 bases
Position: chr19:13408479-13422627
Accession: 105874242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000034523	MBD	PF01429.19	3.3e-16	1	1
ENSMICP00000017610	MBD	PF01429.19	3.3e-16	1	1
ENSMICP00000027606	MBD	PF01429.19	3.5e-16	1	1
ENSMICP00000031228	MBD	PF01429.19	3.7e-16	1	1
ENSMICP00000025799	MBD	PF01429.19	4e-16	1	1
ENSMICP00000005855	MBD	PF01429.19	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000006415	MBD1-206	1890	-	ENSMICP00000005855	629 (aa)	-	UPI000C2EC610
ENSMICT00000041408	MBD1-201	1725	-	ENSMICP00000027606	574 (aa)	-	UPI000C2EB153
ENSMICT00000044533	MBD1-203	4727	XM_012769858	ENSMICP00000031228	559 (aa)	XP_012625312	UPI000643785F
ENSMICT00000037918	MBD1-204	1755	-	ENSMICP00000034523	585 (aa)	-	UPI000C2EA8E1
ENSMICT00000033897	MBD1-202	4895	XM_012769851	ENSMICP00000025799	615 (aa)	XP_012625305	UPI000643E328
ENSMICT00000042616	MBD1-205	1635	-	ENSMICP00000017610	544 (aa)	-	UPI000C2EA852

Gene Model

Click here to download ENSMICG00000006414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000006414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000006414	MBD1	100	90.407	ENSG00000141644	MBD1	100	90.081	Homo_sapiens
ENSMICG00000006414	MBD1	100	85.466	ENSAMEG00000000238	MBD1	96	85.466	Ailuropoda_melanoleuca
ENSMICG00000006414	MBD1	70	44.691	ENSACAG00000006091	-	100	43.204	Anolis_carolinensis
ENSMICG00000006414	MBD1	100	88.416	ENSANAG00000036253	MBD1	100	87.500	Aotus_nancymaae
ENSMICG00000006414	MBD1	100	86.350	ENSBTAG00000003801	MBD1	100	85.227	Bos_taurus
ENSMICG00000006414	MBD1	100	88.927	ENSCJAG00000004959	MBD1	99	88.927	Callithrix_jacchus
ENSMICG00000006414	MBD1	100	85.443	ENSCAFG00000018928	MBD1	96	85.443	Canis_familiaris
ENSMICG00000006414	MBD1	99	84.615	ENSCAFG00020024272	MBD1	97	84.615	Canis_lupus_dingo
ENSMICG00000006414	MBD1	100	86.310	ENSCHIG00000021134	MBD1	100	84.740	Capra_hircus
ENSMICG00000006414	MBD1	100	87.905	ENSTSYG00000000509	MBD1	99	87.905	Carlito_syrichta
ENSMICG00000006414	MBD1	99	71.351	ENSCAPG00000015782	MBD1	96	69.189	Cavia_aperea
ENSMICG00000006414	MBD1	100	83.556	ENSCPOG00000001671	MBD1	91	83.556	Cavia_porcellus
ENSMICG00000006414	MBD1	100	88.038	ENSCCAG00000034600	MBD1	99	86.055	Cebus_capucinus
ENSMICG00000006414	MBD1	100	90.407	ENSCATG00000029959	MBD1	100	90.081	Cercocebus_atys
ENSMICG00000006414	MBD1	100	84.000	ENSCLAG00000007457	MBD1	89	82.595	Chinchilla_lanigera
ENSMICG00000006414	MBD1	100	90.569	ENSCSAG00000018070	MBD1	100	90.244	Chlorocebus_sabaeus
ENSMICG00000006414	MBD1	100	90.244	ENSCANG00000033425	MBD1	100	89.919	Colobus_angolensis_palliatus
ENSMICG00000006414	MBD1	100	73.625	ENSCGRG00001014843	Mbd1	100	73.667	Cricetulus_griseus_chok1gshd
ENSMICG00000006414	MBD1	99	64.973	ENSCGRG00000014135	Mbd1	96	64.973	Cricetulus_griseus_crigri
ENSMICG00000006414	MBD1	100	80.854	ENSDNOG00000015998	MBD1	100	81.013	Dasypus_novemcinctus
ENSMICG00000006414	MBD1	99	75.362	ENSDORG00000013917	Mbd1	97	76.855	Dipodomys_ordii
ENSMICG00000006414	MBD1	100	85.466	ENSEASG00005003857	MBD1	100	85.624	Equus_asinus_asinus
ENSMICG00000006414	MBD1	100	86.364	ENSECAG00000011497	MBD1	80	86.364	Equus_caballus
ENSMICG00000006414	MBD1	100	86.256	ENSFCAG00000015730	MBD1	100	86.256	Felis_catus
ENSMICG00000006414	MBD1	99	73.611	ENSFDAG00000011085	MBD1	96	79.545	Fukomys_damarensis
ENSMICG00000006414	MBD1	54	59.375	ENSGACG00000012106	-	58	31.405	Gasterosteus_aculeatus
ENSMICG00000006414	MBD1	100	90.244	ENSGGOG00000016966	MBD1	100	89.919	Gorilla_gorilla
ENSMICG00000006414	MBD1	100	83.556	ENSHGLG00000008740	MBD1	100	84.878	Heterocephalus_glaber_female
ENSMICG00000006414	MBD1	100	73.973	ENSHGLG00100005198	MBD1	100	83.067	Heterocephalus_glaber_male
ENSMICG00000006414	MBD1	100	82.880	ENSSTOG00000007780	MBD1	100	82.720	Ictidomys_tridecemlineatus
ENSMICG00000006414	MBD1	98	77.091	ENSJJAG00000022859	Mbd1	96	78.000	Jaculus_jaculus
ENSMICG00000006414	MBD1	88	37.743	ENSLACG00000002414	-	53	65.079	Latimeria_chalumnae
ENSMICG00000006414	MBD1	99	74.346	ENSLAFG00000031328	MBD1	97	74.346	Loxodonta_africana
ENSMICG00000006414	MBD1	100	90.407	ENSMFAG00000026335	MBD1	100	90.081	Macaca_fascicularis
ENSMICG00000006414	MBD1	100	89.333	ENSMMUG00000009050	MBD1	100	88.924	Macaca_mulatta
ENSMICG00000006414	MBD1	100	90.407	ENSMNEG00000038822	MBD1	100	90.081	Macaca_nemestrina
ENSMICG00000006414	MBD1	100	90.407	ENSMLEG00000043121	MBD1	100	90.081	Mandrillus_leucophaeus
ENSMICG00000006414	MBD1	50	77.419	ENSMAUG00000021798	-	97	77.860	Mesocricetus_auratus
ENSMICG00000006414	MBD1	72	41.565	ENSMODG00000001286	-	58	43.622	Monodelphis_domestica
ENSMICG00000006414	MBD1	51	48.980	ENSMALG00000007808	mbd1b	52	55.385	Monopterus_albus
ENSMICG00000006414	MBD1	99	67.670	ENSMUSG00000024561	Mbd1	97	68.304	Mus_musculus
ENSMICG00000006414	MBD1	100	68.780	MGP_PahariEiJ_G0019128	Mbd1	100	69.097	Mus_pahari
ENSMICG00000006414	MBD1	98	69.305	MGP_SPRETEiJ_G0023304	Mbd1	99	69.952	Mus_spretus
ENSMICG00000006414	MBD1	100	85.624	ENSMPUG00000008843	MBD1	96	85.624	Mustela_putorius_furo
ENSMICG00000006414	MBD1	100	83.228	ENSMLUG00000008286	MBD1	96	83.228	Myotis_lucifugus
ENSMICG00000006414	MBD1	98	76.577	ENSNGAG00000011412	Mbd1	96	76.630	Nannospalax_galili
ENSMICG00000006414	MBD1	98	80.037	ENSNLEG00000032711	-	99	75.128	Nomascus_leucogenys
ENSMICG00000006414	MBD1	100	89.756	ENSNLEG00000011661	-	100	89.431	Nomascus_leucogenys
ENSMICG00000006414	MBD1	100	80.357	ENSOPRG00000007647	MBD1	100	73.496	Ochotona_princeps
ENSMICG00000006414	MBD1	99	81.670	ENSODEG00000018451	MBD1	97	79.855	Octodon_degus
ENSMICG00000006414	MBD1	65	35.393	ENSONIG00000020289	mbd1b	52	50.633	Oreochromis_niloticus
ENSMICG00000006414	MBD1	85	47.436	ENSOANG00000014593	-	100	47.243	Ornithorhynchus_anatinus
ENSMICG00000006414	MBD1	100	84.889	ENSOCUG00000006554	MBD1	100	83.544	Oryctolagus_cuniculus
ENSMICG00000006414	MBD1	60	32.668	ENSORLG00020000575	mbd1b	52	56.923	Oryzias_latipes_hni
ENSMICG00000006414	MBD1	64	31.553	ENSOMEG00000023660	mbd1b	54	58.462	Oryzias_melastigma
ENSMICG00000006414	MBD1	100	86.739	ENSOGAG00000003784	MBD1	96	86.739	Otolemur_garnettii
ENSMICG00000006414	MBD1	100	82.650	ENSOARG00000004218	MBD1	95	83.754	Ovis_aries
ENSMICG00000006414	MBD1	100	90.244	ENSPPAG00000038886	MBD1	100	89.919	Pan_paniscus
ENSMICG00000006414	MBD1	100	87.175	ENSPPRG00000021387	MBD1	100	87.013	Panthera_pardus
ENSMICG00000006414	MBD1	100	87.013	ENSPTIG00000021231	MBD1	100	86.851	Panthera_tigris_altaica
ENSMICG00000006414	MBD1	100	90.244	ENSPTRG00000010021	MBD1	100	89.919	Pan_troglodytes
ENSMICG00000006414	MBD1	100	90.119	ENSPANG00000010867	MBD1	99	90.119	Papio_anubis
ENSMICG00000006414	MBD1	99	66.252	ENSPEMG00000022630	Mbd1	97	67.616	Peromyscus_maniculatus_bairdii
ENSMICG00000006414	MBD1	92	55.449	ENSPCIG00000027937	-	86	45.310	Phascolarctos_cinereus
ENSMICG00000006414	MBD1	100	90.244	ENSPPYG00000009158	MBD1	91	89.919	Pongo_abelii
ENSMICG00000006414	MBD1	99	75.244	ENSPCAG00000001648	MBD1	99	75.081	Procavia_capensis
ENSMICG00000006414	MBD1	100	95.741	ENSPCOG00000012450	MBD1	100	95.122	Propithecus_coquereli
ENSMICG00000006414	MBD1	99	60.428	ENSRNOG00000024104	Mbd1	96	60.250	Rattus_norvegicus
ENSMICG00000006414	MBD1	100	88.889	ENSRBIG00000041294	MBD1	98	89.011	Rhinopithecus_bieti
ENSMICG00000006414	MBD1	100	90.081	ENSRROG00000032517	MBD1	100	89.756	Rhinopithecus_roxellana
ENSMICG00000006414	MBD1	100	88.889	ENSSBOG00000027169	MBD1	99	89.134	Saimiri_boliviensis_boliviensis
ENSMICG00000006414	MBD1	85	47.323	ENSSHAG00000003661	-	100	47.752	Sarcophilus_harrisii
ENSMICG00000006414	MBD1	100	86.607	ENSSSCG00000004516	MBD1	98	86.667	Sus_scrofa
ENSMICG00000006414	MBD1	70	86.207	ENSTBEG00000012651	-	68	85.417	Tupaia_belangeri
ENSMICG00000006414	MBD1	100	86.647	ENSTTRG00000015523	MBD1	100	83.604	Tursiops_truncatus
ENSMICG00000006414	MBD1	100	82.114	ENSUAMG00000004752	MBD1	100	82.010	Ursus_americanus
ENSMICG00000006414	MBD1	100	86.688	ENSUMAG00000002947	MBD1	100	86.526	Ursus_maritimus