EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000006553 (Gene tree)
Gene ID: 105863514
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 35432 bases
Position: chr2:45193299-45228730
Accession: 105863514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000045575	PWI	PF01480.17	7.1e-30	1	1
ENSMICP00000048161	PWI	PF01480.17	7.9e-30	1	1
ENSMICP00000034512	PWI	PF01480.17	8.4e-30	1	1
ENSMICP00000005995	PWI	PF01480.17	8.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000064033	SRRM1-204	2595	-	ENSMICP00000048161	864 (aa)	-	UPI000C2ED6DA
ENSMICT00000061263	SRRM1-203	5120	-	ENSMICP00000044777	80 (aa)	-	UPI000C2EC868
ENSMICT00000042392	SRRM1-202	3970	XM_012750680	ENSMICP00000034512	904 (aa)	XP_012606134	UPI0006431DC7
ENSMICT00000006562	SRRM1-201	4012	XM_012750677	ENSMICP00000005995	918 (aa)	XP_012606131	UPI000643E17A
ENSMICT00000058511	SRRM1-205	2346	-	ENSMICP00000045575	781 (aa)	-	UPI000C2EB064

Gene Model

Click here to download ENSMICG00000006553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000006553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000006553	SRRM1	100	98.451	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSMICG00000006553	SRRM1	100	97.495	ENSAMEG00000010075	SRRM1	100	97.495	Ailuropoda_melanoleuca
ENSMICG00000006553	SRRM1	100	97.821	ENSANAG00000035606	SRRM1	100	97.821	Aotus_nancymaae
ENSMICG00000006553	SRRM1	100	97.456	ENSBTAG00000013772	SRRM1	100	97.456	Bos_taurus
ENSMICG00000006553	SRRM1	100	96.732	ENSCJAG00000020822	SRRM1	100	96.833	Callithrix_jacchus
ENSMICG00000006553	SRRM1	100	98.119	ENSCAFG00020020948	SRRM1	100	98.119	Canis_lupus_dingo
ENSMICG00000006553	SRRM1	89	88.447	ENSCAFG00020000003	-	99	88.447	Canis_lupus_dingo
ENSMICG00000006553	SRRM1	100	96.288	ENSCHIG00000014656	SRRM1	100	96.288	Capra_hircus
ENSMICG00000006553	SRRM1	100	98.230	ENSTSYG00000006782	SRRM1	100	98.230	Carlito_syrichta
ENSMICG00000006553	SRRM1	99	94.621	ENSCAPG00000011473	SRRM1	100	94.621	Cavia_aperea
ENSMICG00000006553	SRRM1	100	95.534	ENSCPOG00000015594	SRRM1	100	95.534	Cavia_porcellus
ENSMICG00000006553	SRRM1	100	97.456	ENSCCAG00000029474	SRRM1	100	97.456	Cebus_capucinus
ENSMICG00000006553	SRRM1	100	98.230	ENSCATG00000031303	SRRM1	100	98.230	Cercocebus_atys
ENSMICG00000006553	SRRM1	100	96.514	ENSCLAG00000014592	SRRM1	100	96.514	Chinchilla_lanigera
ENSMICG00000006553	SRRM1	74	96.944	ENSCHOG00000000027	SRRM1	68	96.944	Choloepus_hoffmanni
ENSMICG00000006553	SRRM1	100	98.009	ENSCANG00000028271	SRRM1	100	98.009	Colobus_angolensis_palliatus
ENSMICG00000006553	SRRM1	98	92.000	ENSDNOG00000049141	SRRM1	99	92.000	Dasypus_novemcinctus
ENSMICG00000006553	SRRM1	100	97.168	ENSEASG00005004270	SRRM1	100	97.168	Equus_asinus_asinus
ENSMICG00000006553	SRRM1	100	97.345	ENSECAG00000026981	SRRM1	100	97.345	Equus_caballus
ENSMICG00000006553	SRRM1	62	100.000	ENSEEUG00000013830	SRRM1	56	90.385	Erinaceus_europaeus
ENSMICG00000006553	SRRM1	100	98.009	ENSFCAG00000000678	-	100	98.009	Felis_catus
ENSMICG00000006553	SRRM1	100	97.059	ENSFDAG00000009903	SRRM1	100	97.059	Fukomys_damarensis
ENSMICG00000006553	SRRM1	100	98.341	ENSGGOG00000005209	SRRM1	100	98.341	Gorilla_gorilla
ENSMICG00000006553	SRRM1	78	72.059	ENSHGLG00000013761	-	55	91.935	Heterocephalus_glaber_female
ENSMICG00000006553	SRRM1	100	97.168	ENSHGLG00000017105	SRRM1	100	97.168	Heterocephalus_glaber_female
ENSMICG00000006553	SRRM1	99	96.667	ENSHGLG00100016772	SRRM1	99	96.667	Heterocephalus_glaber_male
ENSMICG00000006553	SRRM1	100	98.475	ENSSTOG00000014640	SRRM1	100	98.475	Ictidomys_tridecemlineatus
ENSMICG00000006553	SRRM1	100	94.592	ENSLAFG00000013830	SRRM1	100	94.592	Loxodonta_africana
ENSMICG00000006553	SRRM1	99	70.163	ENSMFAG00000038841	-	61	71.831	Macaca_fascicularis
ENSMICG00000006553	SRRM1	100	98.366	ENSMFAG00000025726	SRRM1	100	98.366	Macaca_fascicularis
ENSMICG00000006553	SRRM1	57	79.477	ENSMMUG00000039269	-	59	71.831	Macaca_mulatta
ENSMICG00000006553	SRRM1	100	98.230	ENSMMUG00000006645	SRRM1	100	98.230	Macaca_mulatta
ENSMICG00000006553	SRRM1	100	98.341	ENSMNEG00000039415	SRRM1	100	98.341	Macaca_nemestrina
ENSMICG00000006553	SRRM1	55	98.204	ENSMLEG00000038030	-	100	90.523	Mandrillus_leucophaeus
ENSMICG00000006553	SRRM1	62	71.269	ENSMLEG00000032221	-	61	65.399	Mandrillus_leucophaeus
ENSMICG00000006553	SRRM1	100	98.451	ENSNLEG00000008966	SRRM1	100	98.451	Nomascus_leucogenys
ENSMICG00000006553	SRRM1	67	96.250	ENSMEUG00000014704	SRRM1	55	95.789	Notamacropus_eugenii
ENSMICG00000006553	SRRM1	100	96.417	ENSOCUG00000008438	SRRM1	100	96.417	Oryctolagus_cuniculus
ENSMICG00000006553	SRRM1	100	97.821	ENSOGAG00000010210	SRRM1	100	97.821	Otolemur_garnettii
ENSMICG00000006553	SRRM1	92	97.759	ENSOARG00000006453	SRRM1	99	97.759	Ovis_aries
ENSMICG00000006553	SRRM1	100	98.341	ENSPPAG00000043918	SRRM1	100	98.341	Pan_paniscus
ENSMICG00000006553	SRRM1	100	98.009	ENSPPRG00000002509	SRRM1	100	98.009	Panthera_pardus
ENSMICG00000006553	SRRM1	100	94.218	ENSPTIG00000008778	-	100	94.218	Panthera_tigris_altaica
ENSMICG00000006553	SRRM1	100	98.475	ENSPTRG00000000349	SRRM1	100	98.475	Pan_troglodytes
ENSMICG00000006553	SRRM1	99	66.212	ENSPANG00000035568	-	54	66.505	Papio_anubis
ENSMICG00000006553	SRRM1	100	97.582	ENSPANG00000010194	SRRM1	100	97.582	Papio_anubis
ENSMICG00000006553	SRRM1	54	94.170	ENSPCIG00000009214	SRRM1	60	84.440	Phascolarctos_cinereus
ENSMICG00000006553	SRRM1	100	97.606	ENSPPYG00000001716	SRRM1	100	97.606	Pongo_abelii
ENSMICG00000006553	SRRM1	55	99.408	ENSPCAG00000015138	SRRM1	53	99.408	Procavia_capensis
ENSMICG00000006553	SRRM1	100	98.844	ENSPCOG00000021311	SRRM1	100	98.844	Propithecus_coquereli
ENSMICG00000006553	SRRM1	100	97.495	ENSPVAG00000005836	SRRM1	100	97.495	Pteropus_vampyrus
ENSMICG00000006553	SRRM1	100	98.119	ENSRROG00000035151	SRRM1	100	98.119	Rhinopithecus_roxellana
ENSMICG00000006553	SRRM1	100	96.078	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSMICG00000006553	SRRM1	57	96.602	ENSSHAG00000011061	SRRM1	51	100.000	Sarcophilus_harrisii
ENSMICG00000006553	SRRM1	70	95.291	ENSSARG00000013718	SRRM1	86	89.069	Sorex_araneus
ENSMICG00000006553	SRRM1	62	72.077	ENSSPUG00000015890	SRRM1	57	83.026	Sphenodon_punctatus
ENSMICG00000006553	SRRM1	99	97.585	ENSSSCG00000032947	SRRM1	100	97.497	Sus_scrofa
ENSMICG00000006553	SRRM1	100	97.168	ENSTBEG00000000100	SRRM1	100	97.168	Tupaia_belangeri
ENSMICG00000006553	SRRM1	99	96.487	ENSTTRG00000009365	SRRM1	100	96.487	Tursiops_truncatus
ENSMICG00000006553	SRRM1	88	98.747	ENSUMAG00000013121	SRRM1	95	98.747	Ursus_maritimus
ENSMICG00000006553	SRRM1	96	93.424	ENSVPAG00000007698	SRRM1	100	93.424	Vicugna_pacos
ENSMICG00000006553	SRRM1	100	95.370	ENSVVUG00000026966	SRRM1	100	95.370	Vulpes_vulpes