EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000006572 (Gene tree)
Gene ID: 105856361
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 50314 bases
Position: chr25:15610407-15660720
Accession: 105856361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000006007	PRP4	PF08799.11	1.3e-13	1	1
ENSMICP00000018509	PRP4	PF08799.11	1.3e-13	1	1
ENSMICP00000022769	PRP4	PF08799.11	1.4e-13	1	1
ENSMICP00000029777	PRP4	PF08799.11	1.5e-13	1	1
ENSMICP00000018509	Prp18	PF02840.15	6.6e-63	1	1
ENSMICP00000022769	Prp18	PF02840.15	7.8e-63	1	1
ENSMICP00000029777	Prp18	PF02840.15	5.7e-62	1	1
ENSMICP00000006007	Prp18	PF02840.15	1.7e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000006575	-	1014	-	ENSMICP00000006007	337 (aa)	-	UPI000C2EA9B0
ENSMICT00000028291	-	996	-	ENSMICP00000029777	331 (aa)	-	UPI000C2EB004
ENSMICT00000034499	-	3654	XM_012738010	ENSMICP00000018509	342 (aa)	XP_012593464	UPI0006435203
ENSMICT00000043413	-	3687	XM_012738009	ENSMICP00000022769	351 (aa)	XP_012593463	UPI0006432F85

Gene Model

Click here to download ENSMICG00000006572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000006572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000006572	-	100	99.708	ENSG00000165630	PRPF18	100	99.708	Homo_sapiens
ENSMICG00000006572	-	100	85.965	ENSAPOG00000024177	prpf18	100	85.965	Acanthochromis_polyacanthus
ENSMICG00000006572	-	100	99.123	ENSAMEG00000013591	-	100	99.123	Ailuropoda_melanoleuca
ENSMICG00000006572	-	100	84.795	ENSACIG00000001186	prpf18	100	84.795	Amphilophus_citrinellus
ENSMICG00000006572	-	98	85.970	ENSAOCG00000006572	prpf18	94	84.257	Amphiprion_ocellaris
ENSMICG00000006572	-	100	86.257	ENSAPEG00000004564	prpf18	100	86.257	Amphiprion_percula
ENSMICG00000006572	-	100	84.795	ENSATEG00000000303	prpf18	100	84.795	Anabas_testudineus
ENSMICG00000006572	-	99	91.176	ENSAPLG00000003387	-	99	91.176	Anas_platyrhynchos
ENSMICG00000006572	-	100	91.570	ENSACAG00000000818	-	100	91.570	Anolis_carolinensis
ENSMICG00000006572	-	100	99.145	ENSANAG00000037445	-	100	99.145	Aotus_nancymaae
ENSMICG00000006572	-	100	84.795	ENSACLG00000026296	prpf18	100	84.795	Astatotilapia_calliptera
ENSMICG00000006572	-	100	84.615	ENSAMXG00000012848	prpf18	100	84.615	Astyanax_mexicanus
ENSMICG00000006572	-	100	98.860	ENSBTAG00000017244	PRPF18	100	98.860	Bos_taurus
ENSMICG00000006572	-	98	38.793	WBGene00009320	F32B6.3	97	38.793	Caenorhabditis_elegans
ENSMICG00000006572	-	100	99.145	ENSCJAG00000009432	-	100	99.145	Callithrix_jacchus
ENSMICG00000006572	-	100	99.123	ENSCAFG00000004735	-	100	99.123	Canis_familiaris
ENSMICG00000006572	-	100	99.123	ENSCAFG00020007712	-	100	99.123	Canis_lupus_dingo
ENSMICG00000006572	-	100	98.860	ENSCHIG00000000499	-	100	98.860	Capra_hircus
ENSMICG00000006572	-	100	98.860	ENSTSYG00000003517	-	100	98.860	Carlito_syrichta
ENSMICG00000006572	-	100	99.708	ENSCPOG00000021069	-	100	99.708	Cavia_porcellus
ENSMICG00000006572	-	100	99.145	ENSCCAG00000036822	-	100	99.145	Cebus_capucinus
ENSMICG00000006572	-	100	88.596	ENSCATG00000016633	-	100	88.596	Cercocebus_atys
ENSMICG00000006572	-	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSMICG00000006572	-	100	99.715	ENSCSAG00000013109	-	100	99.715	Chlorocebus_sabaeus
ENSMICG00000006572	-	100	89.045	ENSCPBG00000003100	-	100	89.607	Chrysemys_picta_bellii
ENSMICG00000006572	-	99	55.000	ENSCING00000020481	-	97	55.000	Ciona_intestinalis
ENSMICG00000006572	-	99	54.624	ENSCSAVG00000010546	-	99	54.651	Ciona_savignyi
ENSMICG00000006572	-	100	99.430	ENSCANG00000034900	-	100	99.430	Colobus_angolensis_palliatus
ENSMICG00000006572	-	100	99.123	ENSCGRG00001023665	Prpf18	100	99.123	Cricetulus_griseus_chok1gshd
ENSMICG00000006572	-	100	99.123	ENSCGRG00000014690	Prpf18	100	99.123	Cricetulus_griseus_crigri
ENSMICG00000006572	-	100	82.749	ENSCSEG00000005536	prpf18	99	82.749	Cynoglossus_semilaevis
ENSMICG00000006572	-	100	84.795	ENSCVAG00000012401	prpf18	100	84.795	Cyprinodon_variegatus
ENSMICG00000006572	-	100	84.795	ENSDARG00000058306	prpf18	100	84.795	Danio_rerio
ENSMICG00000006572	-	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSMICG00000006572	-	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSMICG00000006572	-	99	51.917	FBgn0027784	Prp18	98	51.622	Drosophila_melanogaster
ENSMICG00000006572	-	100	87.719	ENSETEG00000015060	-	100	87.719	Echinops_telfairi
ENSMICG00000006572	-	100	66.282	ENSEBUG00000016502	prpf18	99	65.418	Eptatretus_burgeri
ENSMICG00000006572	-	100	99.430	ENSEASG00005019373	-	100	99.430	Equus_asinus_asinus
ENSMICG00000006572	-	100	99.430	ENSECAG00000006997	PRPF18	100	99.430	Equus_caballus
ENSMICG00000006572	-	96	60.923	ENSEEUG00000001171	-	100	62.658	Erinaceus_europaeus
ENSMICG00000006572	-	100	82.799	ENSELUG00000022190	prpf18	100	82.799	Esox_lucius
ENSMICG00000006572	-	100	98.860	ENSFCAG00000004436	-	100	98.860	Felis_catus
ENSMICG00000006572	-	96	91.077	ENSFALG00000001912	-	97	91.077	Ficedula_albicollis
ENSMICG00000006572	-	99	64.928	ENSFDAG00000010713	-	97	64.928	Fukomys_damarensis
ENSMICG00000006572	-	94	99.062	ENSFDAG00000014026	-	100	99.062	Fukomys_damarensis
ENSMICG00000006572	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSMICG00000006572	-	99	80.352	ENSGMOG00000012210	prpf18	99	80.352	Gadus_morhua
ENSMICG00000006572	-	100	92.105	ENSGALG00000043593	-	100	92.105	Gallus_gallus
ENSMICG00000006572	-	100	83.626	ENSGAFG00000006034	prpf18	100	83.626	Gambusia_affinis
ENSMICG00000006572	-	100	82.164	ENSGACG00000012232	prpf18	100	82.164	Gasterosteus_aculeatus
ENSMICG00000006572	-	100	92.398	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSMICG00000006572	-	98	98.784	ENSGGOG00000025188	-	98	98.784	Gorilla_gorilla
ENSMICG00000006572	-	100	84.795	ENSHBUG00000010264	prpf18	100	84.795	Haplochromis_burtoni
ENSMICG00000006572	-	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSMICG00000006572	-	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSMICG00000006572	-	100	84.795	ENSHCOG00000015987	prpf18	100	84.795	Hippocampus_comes
ENSMICG00000006572	-	100	82.436	ENSIPUG00000007432	prpf18	100	83.286	Ictalurus_punctatus
ENSMICG00000006572	-	100	97.953	ENSSTOG00000008735	-	100	97.953	Ictidomys_tridecemlineatus
ENSMICG00000006572	-	100	74.702	ENSJJAG00000015191	-	100	74.702	Jaculus_jaculus
ENSMICG00000006572	-	100	99.708	ENSJJAG00000024041	-	100	99.708	Jaculus_jaculus
ENSMICG00000006572	-	100	83.626	ENSKMAG00000012124	prpf18	100	83.626	Kryptolebias_marmoratus
ENSMICG00000006572	-	99	84.024	ENSLBEG00000028466	prpf18	99	84.024	Labrus_bergylta
ENSMICG00000006572	-	100	86.550	ENSLACG00000009885	prpf18	100	86.550	Latimeria_chalumnae
ENSMICG00000006572	-	100	90.351	ENSLOCG00000016736	prpf18	100	90.351	Lepisosteus_oculatus
ENSMICG00000006572	-	100	99.708	ENSLAFG00000007753	-	100	99.708	Loxodonta_africana
ENSMICG00000006572	-	100	99.715	ENSMFAG00000000540	-	100	99.715	Macaca_fascicularis
ENSMICG00000006572	-	100	99.715	ENSMMUG00000015071	PRPF18	100	99.715	Macaca_mulatta
ENSMICG00000006572	-	100	99.715	ENSMNEG00000024679	-	100	99.715	Macaca_nemestrina
ENSMICG00000006572	-	100	84.503	ENSMLEG00000031715	-	91	95.985	Mandrillus_leucophaeus
ENSMICG00000006572	-	100	83.918	ENSMAMG00000006610	prpf18	100	83.918	Mastacembelus_armatus
ENSMICG00000006572	-	100	84.795	ENSMZEG00005019392	prpf18	100	84.795	Maylandia_zebra
ENSMICG00000006572	-	100	92.105	ENSMGAG00000005023	-	100	92.105	Meleagris_gallopavo
ENSMICG00000006572	-	100	99.708	ENSMOCG00000021468	Prpf18	100	99.708	Microtus_ochrogaster
ENSMICG00000006572	-	100	83.626	ENSMMOG00000013012	prpf18	100	83.626	Mola_mola
ENSMICG00000006572	-	97	94.817	ENSMODG00000016902	-	91	94.817	Monodelphis_domestica
ENSMICG00000006572	-	100	85.965	ENSMODG00000024043	-	100	85.965	Monodelphis_domestica
ENSMICG00000006572	-	100	78.286	ENSMALG00000005486	prpf18	100	78.571	Monopterus_albus
ENSMICG00000006572	-	100	99.123	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSMICG00000006572	-	100	98.830	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSMICG00000006572	-	100	99.415	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSMICG00000006572	-	100	98.538	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSMICG00000006572	-	100	98.830	ENSMPUG00000000938	-	100	98.830	Mustela_putorius_furo
ENSMICG00000006572	-	100	98.830	ENSMLUG00000009200	-	100	98.830	Myotis_lucifugus
ENSMICG00000006572	-	100	99.123	ENSNGAG00000012500	-	100	99.123	Nannospalax_galili
ENSMICG00000006572	-	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSMICG00000006572	-	100	84.795	ENSNBRG00000001778	prpf18	100	84.795	Neolamprologus_brichardi
ENSMICG00000006572	-	100	99.715	ENSNLEG00000012186	-	100	99.715	Nomascus_leucogenys
ENSMICG00000006572	-	76	79.923	ENSMEUG00000005032	-	100	65.497	Notamacropus_eugenii
ENSMICG00000006572	-	81	78.467	ENSOPRG00000002153	-	100	81.132	Ochotona_princeps
ENSMICG00000006572	-	100	98.830	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSMICG00000006572	-	98	84.179	ENSONIG00000014854	prpf18	96	84.179	Oreochromis_niloticus
ENSMICG00000006572	-	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSMICG00000006572	-	100	99.415	ENSOCUG00000027756	-	100	95.322	Oryctolagus_cuniculus
ENSMICG00000006572	-	100	82.621	ENSORLG00000010293	prpf18	100	82.621	Oryzias_latipes
ENSMICG00000006572	-	100	84.211	ENSORLG00020001530	prpf18	100	84.211	Oryzias_latipes_hni
ENSMICG00000006572	-	100	83.918	ENSORLG00015013705	prpf18	100	83.918	Oryzias_latipes_hsok
ENSMICG00000006572	-	100	85.380	ENSOMEG00000009167	prpf18	100	85.380	Oryzias_melastigma
ENSMICG00000006572	-	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSMICG00000006572	-	100	98.860	ENSOARG00000006243	-	100	98.860	Ovis_aries
ENSMICG00000006572	-	100	99.715	ENSPPAG00000041959	-	100	99.715	Pan_paniscus
ENSMICG00000006572	-	100	98.830	ENSPPRG00000000107	-	100	98.830	Panthera_pardus
ENSMICG00000006572	-	100	98.538	ENSPTIG00000021094	-	100	98.538	Panthera_tigris_altaica
ENSMICG00000006572	-	100	99.715	ENSPTRG00000002306	PRPF18	100	99.715	Pan_troglodytes
ENSMICG00000006572	-	100	99.430	ENSPANG00000023346	-	100	99.430	Papio_anubis
ENSMICG00000006572	-	90	96.296	ENSPKIG00000014128	prpf18	96	83.476	Paramormyrops_kingsleyae
ENSMICG00000006572	-	100	92.690	ENSPSIG00000016064	-	100	92.690	Pelodiscus_sinensis
ENSMICG00000006572	-	100	81.873	ENSPMGG00000016486	prpf18	100	81.873	Periophthalmus_magnuspinnatus
ENSMICG00000006572	-	100	99.415	ENSPEMG00000013704	Prpf18	100	99.415	Peromyscus_maniculatus_bairdii
ENSMICG00000006572	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSMICG00000006572	-	98	95.441	ENSPCIG00000012963	-	99	96.519	Phascolarctos_cinereus
ENSMICG00000006572	-	100	82.336	ENSPFOG00000017611	prpf18	100	82.336	Poecilia_formosa
ENSMICG00000006572	-	100	83.918	ENSPLAG00000000369	prpf18	100	83.918	Poecilia_latipinna
ENSMICG00000006572	-	100	83.918	ENSPMEG00000005183	prpf18	100	83.918	Poecilia_mexicana
ENSMICG00000006572	-	100	83.333	ENSPREG00000015232	prpf18	100	83.333	Poecilia_reticulata
ENSMICG00000006572	-	100	99.415	ENSPPYG00000002101	PRPF18	100	99.415	Pongo_abelii
ENSMICG00000006572	-	100	80.702	ENSPCAG00000010833	-	100	80.702	Procavia_capensis
ENSMICG00000006572	-	100	92.398	ENSPCOG00000013057	-	100	92.398	Propithecus_coquereli
ENSMICG00000006572	-	100	61.404	ENSPVAG00000002947	-	100	61.404	Pteropus_vampyrus
ENSMICG00000006572	-	100	84.795	ENSPNYG00000003554	prpf18	100	84.795	Pundamilia_nyererei
ENSMICG00000006572	-	100	85.185	ENSPNAG00000023151	prpf18	100	85.185	Pygocentrus_nattereri
ENSMICG00000006572	-	100	98.538	ENSRNOG00000018396	Prpf18	100	98.538	Rattus_norvegicus
ENSMICG00000006572	-	100	99.715	ENSRBIG00000028028	-	100	99.715	Rhinopithecus_bieti
ENSMICG00000006572	-	100	99.430	ENSRROG00000040695	-	100	99.430	Rhinopithecus_roxellana
ENSMICG00000006572	-	100	99.145	ENSSBOG00000034482	-	100	99.145	Saimiri_boliviensis_boliviensis
ENSMICG00000006572	-	100	77.193	ENSSHAG00000009669	-	100	77.193	Sarcophilus_harrisii
ENSMICG00000006572	-	100	96.491	ENSSHAG00000016463	-	100	96.491	Sarcophilus_harrisii
ENSMICG00000006572	-	98	82.609	ENSSFOG00015022118	prpf18	100	79.167	Scleropages_formosus
ENSMICG00000006572	-	77	45.669	ENSSFOG00015021154	-	89	49.099	Scleropages_formosus
ENSMICG00000006572	-	100	83.626	ENSSMAG00000005308	prpf18	100	83.626	Scophthalmus_maximus
ENSMICG00000006572	-	100	85.673	ENSSDUG00000015428	prpf18	100	85.673	Seriola_dumerili
ENSMICG00000006572	-	100	85.673	ENSSLDG00000023989	prpf18	100	85.673	Seriola_lalandi_dorsalis
ENSMICG00000006572	-	82	95.868	ENSSARG00000005307	-	80	95.868	Sorex_araneus
ENSMICG00000006572	-	97	96.711	ENSSPUG00000002619	-	100	92.398	Sphenodon_punctatus
ENSMICG00000006572	-	100	85.088	ENSSPAG00000019502	prpf18	100	85.088	Stegastes_partitus
ENSMICG00000006572	-	100	99.145	ENSSSCG00000026354	-	100	99.145	Sus_scrofa
ENSMICG00000006572	-	100	92.105	ENSTGUG00000002286	-	100	92.105	Taeniopygia_guttata
ENSMICG00000006572	-	100	82.749	ENSTRUG00000011278	prpf18	100	82.749	Takifugu_rubripes
ENSMICG00000006572	-	100	82.456	ENSTNIG00000000911	prpf18	100	82.456	Tetraodon_nigroviridis
ENSMICG00000006572	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSMICG00000006572	-	100	99.415	ENSTTRG00000011117	PRPF18	100	99.415	Tursiops_truncatus
ENSMICG00000006572	-	95	96.308	ENSUAMG00000001815	-	94	96.308	Ursus_americanus
ENSMICG00000006572	-	100	94.152	ENSUMAG00000012329	-	100	94.152	Ursus_maritimus
ENSMICG00000006572	-	100	93.567	ENSVPAG00000011486	-	100	93.567	Vicugna_pacos
ENSMICG00000006572	-	100	99.145	ENSVVUG00000005453	-	100	99.145	Vulpes_vulpes
ENSMICG00000006572	-	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSMICG00000006572	-	100	83.140	ENSXCOG00000020414	prpf18	100	83.140	Xiphophorus_couchianus
ENSMICG00000006572	-	100	83.626	ENSXMAG00000004713	prpf18	91	83.626	Xiphophorus_maculatus