EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000007071 (Gene tree)
Gene ID: 105859789
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 121802 bases
Position: chr20:54595077-54716878
Accession: 105859789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000006458	Not1	PF04054.15	1.3e-152	1	1
ENSMICP00000032482	Not1	PF04054.15	1.3e-152	1	1
ENSMICP00000018266	Not1	PF04054.15	1.8e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000007090	CNOT1-202	7670	XM_020282692	ENSMICP00000006458	2372 (aa)	XP_020138281	UPI00098A1C13
ENSMICT00000047572	CNOT1-203	6969	-	ENSMICP00000018266	2322 (aa)	-	UPI000C2EAAF8
ENSMICT00000036313	CNOT1-204	291	-	ENSMICP00000025382	96 (aa)	-	UPI00085B4834
ENSMICT00000037902	CNOT1-201	8096	XM_020282689	ENSMICP00000032482	2379 (aa)	XP_020138278	UPI00098AB37C

Gene Model

Click here to download ENSMICG00000007071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007071	CNOT1	100	99.579	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSMICG00000007071	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSMICG00000007071	CNOT1	100	99.411	ENSAMEG00000017298	CNOT1	100	99.411	Ailuropoda_melanoleuca
ENSMICG00000007071	CNOT1	90	90.112	ENSACIG00000016003	cnot1	100	90.112	Amphilophus_citrinellus
ENSMICG00000007071	CNOT1	100	90.791	ENSAPEG00000022342	cnot1	100	90.706	Amphiprion_percula
ENSMICG00000007071	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSMICG00000007071	CNOT1	100	97.563	ENSAPLG00000007162	CNOT1	100	97.563	Anas_platyrhynchos
ENSMICG00000007071	CNOT1	92	95.916	ENSACAG00000001602	CNOT1	98	96.195	Anolis_carolinensis
ENSMICG00000007071	CNOT1	100	98.194	ENSANAG00000038198	CNOT1	100	98.194	Aotus_nancymaae
ENSMICG00000007071	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSMICG00000007071	CNOT1	100	91.116	ENSAMXG00000013170	cnot1	100	91.288	Astyanax_mexicanus
ENSMICG00000007071	CNOT1	100	99.663	ENSBTAG00000020782	CNOT1	100	99.663	Bos_taurus
ENSMICG00000007071	CNOT1	82	40.289	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSMICG00000007071	CNOT1	100	99.537	ENSCJAG00000011318	CNOT1	100	99.537	Callithrix_jacchus
ENSMICG00000007071	CNOT1	100	99.328	ENSCAFG00000008426	CNOT1	100	99.328	Canis_familiaris
ENSMICG00000007071	CNOT1	100	99.613	ENSCAFG00020010156	CNOT1	100	99.613	Canis_lupus_dingo
ENSMICG00000007071	CNOT1	100	99.663	ENSCHIG00000010452	CNOT1	100	99.663	Capra_hircus
ENSMICG00000007071	CNOT1	100	99.705	ENSTSYG00000006888	CNOT1	100	99.705	Carlito_syrichta
ENSMICG00000007071	CNOT1	100	94.907	ENSCPOG00000013026	CNOT1	100	94.907	Cavia_porcellus
ENSMICG00000007071	CNOT1	100	97.980	ENSCCAG00000026333	CNOT1	100	97.980	Cebus_capucinus
ENSMICG00000007071	CNOT1	100	99.621	ENSCATG00000032625	CNOT1	100	99.621	Cercocebus_atys
ENSMICG00000007071	CNOT1	100	99.579	ENSCLAG00000006289	CNOT1	100	99.579	Chinchilla_lanigera
ENSMICG00000007071	CNOT1	100	99.621	ENSCSAG00000004731	CNOT1	100	99.621	Chlorocebus_sabaeus
ENSMICG00000007071	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSMICG00000007071	CNOT1	98	95.749	ENSCPBG00000026222	CNOT1	98	98.606	Chrysemys_picta_bellii
ENSMICG00000007071	CNOT1	100	59.025	ENSCING00000009149	-	100	58.811	Ciona_intestinalis
ENSMICG00000007071	CNOT1	89	62.961	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSMICG00000007071	CNOT1	100	97.785	ENSCANG00000040534	CNOT1	100	97.785	Colobus_angolensis_palliatus
ENSMICG00000007071	CNOT1	100	99.242	ENSCGRG00001016365	Cnot1	100	99.242	Cricetulus_griseus_chok1gshd
ENSMICG00000007071	CNOT1	100	99.242	ENSCGRG00000001714	Cnot1	100	99.242	Cricetulus_griseus_crigri
ENSMICG00000007071	CNOT1	100	83.375	ENSCVAG00000018930	cnot1	100	83.166	Cyprinodon_variegatus
ENSMICG00000007071	CNOT1	100	89.853	ENSDARG00000004174	cnot1	100	89.723	Danio_rerio
ENSMICG00000007071	CNOT1	100	97.223	ENSDNOG00000013250	CNOT1	100	97.223	Dasypus_novemcinctus
ENSMICG00000007071	CNOT1	99	46.248	FBgn0085436	Not1	99	48.561	Drosophila_melanogaster
ENSMICG00000007071	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSMICG00000007071	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSMICG00000007071	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.805	Equus_asinus_asinus
ENSMICG00000007071	CNOT1	100	99.705	ENSECAG00000009889	CNOT1	100	99.705	Equus_caballus
ENSMICG00000007071	CNOT1	90	99.216	ENSEEUG00000006015	CNOT1	90	99.216	Erinaceus_europaeus
ENSMICG00000007071	CNOT1	100	89.942	ENSELUG00000014085	cnot1	100	89.570	Esox_lucius
ENSMICG00000007071	CNOT1	100	99.706	ENSFCAG00000025155	CNOT1	100	99.706	Felis_catus
ENSMICG00000007071	CNOT1	100	97.601	ENSFALG00000007285	CNOT1	100	97.601	Ficedula_albicollis
ENSMICG00000007071	CNOT1	100	99.495	ENSFDAG00000013399	CNOT1	100	99.495	Fukomys_damarensis
ENSMICG00000007071	CNOT1	100	90.420	ENSFHEG00000020574	cnot1	100	90.370	Fundulus_heteroclitus
ENSMICG00000007071	CNOT1	92	89.926	ENSGMOG00000012864	cnot1	100	90.019	Gadus_morhua
ENSMICG00000007071	CNOT1	100	97.643	ENSGALG00000002301	CNOT1	100	97.643	Gallus_gallus
ENSMICG00000007071	CNOT1	100	89.445	ENSGAFG00000015005	cnot1	100	89.445	Gambusia_affinis
ENSMICG00000007071	CNOT1	92	90.538	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSMICG00000007071	CNOT1	100	97.728	ENSGAGG00000022646	CNOT1	100	97.770	Gopherus_agassizii
ENSMICG00000007071	CNOT1	100	99.537	ENSGGOG00000009547	CNOT1	100	99.537	Gorilla_gorilla
ENSMICG00000007071	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSMICG00000007071	CNOT1	100	99.411	ENSHGLG00000014322	CNOT1	100	99.411	Heterocephalus_glaber_female
ENSMICG00000007071	CNOT1	100	89.703	ENSHCOG00000006501	cnot1	100	89.745	Hippocampus_comes
ENSMICG00000007071	CNOT1	100	89.160	ENSIPUG00000011915	cnot1	100	89.622	Ictalurus_punctatus
ENSMICG00000007071	CNOT1	100	99.495	ENSSTOG00000005490	CNOT1	100	99.495	Ictidomys_tridecemlineatus
ENSMICG00000007071	CNOT1	100	98.925	ENSJJAG00000000633	Cnot1	100	98.925	Jaculus_jaculus
ENSMICG00000007071	CNOT1	100	90.452	ENSKMAG00000006149	cnot1	100	90.323	Kryptolebias_marmoratus
ENSMICG00000007071	CNOT1	95	96.414	ENSLBEG00000004740	cnot1	100	96.414	Labrus_bergylta
ENSMICG00000007071	CNOT1	100	95.076	ENSLACG00000010869	CNOT1	100	94.907	Latimeria_chalumnae
ENSMICG00000007071	CNOT1	100	92.827	ENSLOCG00000006324	cnot1	100	92.740	Lepisosteus_oculatus
ENSMICG00000007071	CNOT1	100	99.453	ENSLAFG00000000098	CNOT1	100	99.453	Loxodonta_africana
ENSMICG00000007071	CNOT1	100	99.622	ENSMFAG00000035888	CNOT1	100	99.622	Macaca_fascicularis
ENSMICG00000007071	CNOT1	100	99.579	ENSMMUG00000014625	CNOT1	100	99.579	Macaca_mulatta
ENSMICG00000007071	CNOT1	100	97.104	ENSMNEG00000031820	CNOT1	100	99.626	Macaca_nemestrina
ENSMICG00000007071	CNOT1	100	98.447	ENSMLEG00000040933	CNOT1	100	98.447	Mandrillus_leucophaeus
ENSMICG00000007071	CNOT1	100	89.449	ENSMAMG00000016524	cnot1	100	89.487	Mastacembelus_armatus
ENSMICG00000007071	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSMICG00000007071	CNOT1	100	97.391	ENSMGAG00000001908	CNOT1	100	97.391	Meleagris_gallopavo
ENSMICG00000007071	CNOT1	100	99.285	ENSMOCG00000017969	Cnot1	100	99.285	Microtus_ochrogaster
ENSMICG00000007071	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSMICG00000007071	CNOT1	100	97.939	ENSMODG00000014199	CNOT1	100	97.939	Monodelphis_domestica
ENSMICG00000007071	CNOT1	100	90.534	ENSMALG00000008645	cnot1	100	90.534	Monopterus_albus
ENSMICG00000007071	CNOT1	95	99.777	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	Mus_caroli
ENSMICG00000007071	CNOT1	100	99.327	ENSMUSG00000036550	Cnot1	100	99.327	Mus_musculus
ENSMICG00000007071	CNOT1	100	99.285	MGP_PahariEiJ_G0023028	Cnot1	100	99.285	Mus_pahari
ENSMICG00000007071	CNOT1	100	99.327	MGP_SPRETEiJ_G0032549	Cnot1	100	99.327	Mus_spretus
ENSMICG00000007071	CNOT1	100	99.705	ENSMPUG00000004830	CNOT1	100	99.705	Mustela_putorius_furo
ENSMICG00000007071	CNOT1	100	99.116	ENSMLUG00000003728	CNOT1	100	99.116	Myotis_lucifugus
ENSMICG00000007071	CNOT1	100	99.537	ENSNGAG00000018628	Cnot1	100	99.537	Nannospalax_galili
ENSMICG00000007071	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSMICG00000007071	CNOT1	100	99.527	ENSNLEG00000003566	CNOT1	100	99.527	Nomascus_leucogenys
ENSMICG00000007071	CNOT1	87	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSMICG00000007071	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSMICG00000007071	CNOT1	100	99.453	ENSODEG00000016337	CNOT1	100	99.453	Octodon_degus
ENSMICG00000007071	CNOT1	100	90.772	ENSONIG00000007358	cnot1	100	90.478	Oreochromis_niloticus
ENSMICG00000007071	CNOT1	92	98.276	ENSOANG00000012109	CNOT1	100	98.307	Ornithorhynchus_anatinus
ENSMICG00000007071	CNOT1	100	99.705	ENSOCUG00000006911	CNOT1	100	99.705	Oryctolagus_cuniculus
ENSMICG00000007071	CNOT1	100	90.306	ENSORLG00000013734	cnot1	100	90.264	Oryzias_latipes
ENSMICG00000007071	CNOT1	100	90.773	ENSORLG00020017012	cnot1	100	90.554	Oryzias_latipes_hni
ENSMICG00000007071	CNOT1	100	90.687	ENSORLG00015007091	cnot1	100	90.296	Oryzias_latipes_hsok
ENSMICG00000007071	CNOT1	100	90.141	ENSOMEG00000015124	cnot1	100	90.305	Oryzias_melastigma
ENSMICG00000007071	CNOT1	100	99.663	ENSOGAG00000000543	CNOT1	100	99.663	Otolemur_garnettii
ENSMICG00000007071	CNOT1	100	99.663	ENSOARG00000001567	CNOT1	100	99.663	Ovis_aries
ENSMICG00000007071	CNOT1	100	99.579	ENSPPAG00000022013	CNOT1	100	99.579	Pan_paniscus
ENSMICG00000007071	CNOT1	100	99.705	ENSPPRG00000004867	CNOT1	100	99.705	Panthera_pardus
ENSMICG00000007071	CNOT1	100	99.705	ENSPTIG00000012589	CNOT1	100	99.705	Panthera_tigris_altaica
ENSMICG00000007071	CNOT1	100	99.580	ENSPTRG00000008183	CNOT1	100	99.580	Pan_troglodytes
ENSMICG00000007071	CNOT1	100	96.354	ENSPANG00000020901	CNOT1	100	96.354	Papio_anubis
ENSMICG00000007071	CNOT1	100	92.107	ENSPKIG00000023538	CNOT1	100	91.978	Paramormyrops_kingsleyae
ENSMICG00000007071	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSMICG00000007071	CNOT1	100	97.601	ENSPSIG00000005499	CNOT1	100	97.601	Pelodiscus_sinensis
ENSMICG00000007071	CNOT1	100	81.124	ENSPMAG00000009381	cnot1	100	80.856	Petromyzon_marinus
ENSMICG00000007071	CNOT1	100	97.852	ENSPCIG00000007343	CNOT1	100	98.207	Phascolarctos_cinereus
ENSMICG00000007071	CNOT1	99	89.987	ENSPFOG00000003497	cnot1	100	89.852	Poecilia_formosa
ENSMICG00000007071	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.970	Poecilia_latipinna
ENSMICG00000007071	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.970	Poecilia_mexicana
ENSMICG00000007071	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.970	Poecilia_reticulata
ENSMICG00000007071	CNOT1	100	99.621	ENSPPYG00000007410	CNOT1	100	99.621	Pongo_abelii
ENSMICG00000007071	CNOT1	90	97.359	ENSPCAG00000003241	CNOT1	90	97.359	Procavia_capensis
ENSMICG00000007071	CNOT1	100	99.958	ENSPCOG00000027139	CNOT1	100	99.958	Propithecus_coquereli
ENSMICG00000007071	CNOT1	100	97.054	ENSPVAG00000004243	CNOT1	100	97.054	Pteropus_vampyrus
ENSMICG00000007071	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSMICG00000007071	CNOT1	100	90.139	ENSPNAG00000000246	cnot1	100	90.560	Pygocentrus_nattereri
ENSMICG00000007071	CNOT1	100	99.242	ENSRNOG00000012271	Cnot1	100	99.242	Rattus_norvegicus
ENSMICG00000007071	CNOT1	100	97.566	ENSRBIG00000044598	CNOT1	100	97.566	Rhinopithecus_bieti
ENSMICG00000007071	CNOT1	100	99.621	ENSRROG00000000906	CNOT1	100	99.621	Rhinopithecus_roxellana
ENSMICG00000007071	CNOT1	57	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSMICG00000007071	CNOT1	100	95.437	ENSSBOG00000029155	CNOT1	100	95.437	Saimiri_boliviensis_boliviensis
ENSMICG00000007071	CNOT1	100	98.108	ENSSHAG00000012187	CNOT1	100	98.108	Sarcophilus_harrisii
ENSMICG00000007071	CNOT1	100	92.631	ENSSFOG00015017614	cnot1	100	92.245	Scleropages_formosus
ENSMICG00000007071	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSMICG00000007071	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSMICG00000007071	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSMICG00000007071	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSMICG00000007071	CNOT1	100	90.879	ENSSPAG00000018802	cnot1	100	90.626	Stegastes_partitus
ENSMICG00000007071	CNOT1	100	99.537	ENSSSCG00000002799	CNOT1	100	99.537	Sus_scrofa
ENSMICG00000007071	CNOT1	100	97.478	ENSTGUG00000005919	CNOT1	100	97.478	Taeniopygia_guttata
ENSMICG00000007071	CNOT1	100	89.093	ENSTNIG00000018706	cnot1	100	89.177	Tetraodon_nigroviridis
ENSMICG00000007071	CNOT1	80	99.296	ENSTBEG00000000720	CNOT1	80	99.296	Tupaia_belangeri
ENSMICG00000007071	CNOT1	95	99.301	ENSTTRG00000008460	CNOT1	95	99.301	Tursiops_truncatus
ENSMICG00000007071	CNOT1	100	99.705	ENSUAMG00000009251	CNOT1	100	99.705	Ursus_americanus
ENSMICG00000007071	CNOT1	100	99.705	ENSUMAG00000021291	CNOT1	100	99.705	Ursus_maritimus
ENSMICG00000007071	CNOT1	97	97.172	ENSVPAG00000008846	CNOT1	97	97.172	Vicugna_pacos
ENSMICG00000007071	CNOT1	100	98.868	ENSVVUG00000024037	CNOT1	100	99.202	Vulpes_vulpes
ENSMICG00000007071	CNOT1	100	89.924	ENSXETG00000015900	cnot1	100	89.631	Xenopus_tropicalis
ENSMICG00000007071	CNOT1	100	89.571	ENSXCOG00000013552	cnot1	100	89.571	Xiphophorus_couchianus
ENSMICG00000007071	CNOT1	100	89.613	ENSXMAG00000006031	cnot1	100	89.613	Xiphophorus_maculatus