EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000007145 (Gene tree)
Gene ID: 105855104
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 111142 bases
Position: chr27:8943996-9055137
Accession: 105855104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000029981	EST1	PF10374.9	8.5e-25	1	1
ENSMICP00000033209	EST1	PF10374.9	8.6e-25	1	1
ENSMICP00000017724	EST1	PF10374.9	9.6e-25	1	1
ENSMICP00000036598	EST1	PF10374.9	9.8e-25	1	1
ENSMICP00000044705	EST1	PF10374.9	2.8e-22	1	1
ENSMICP00000029981	EST1_DNA_bind	PF10373.9	7e-55	1	1
ENSMICP00000033209	EST1_DNA_bind	PF10373.9	7e-55	1	1
ENSMICP00000017724	EST1_DNA_bind	PF10373.9	7.1e-55	1	1
ENSMICP00000036598	EST1_DNA_bind	PF10373.9	7.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000049012	SMG7-204	3564	-	ENSMICP00000036598	1187 (aa)	-	UPI000C2EBABC
ENSMICT00000026547	SMG7-203	3534	XM_012735859	ENSMICP00000017724	1148 (aa)	XP_012591313	UPI0006438369
ENSMICT00000035716	SMG7-205	3414	-	ENSMICP00000033209	1137 (aa)	-	UPI000C2EB417
ENSMICT00000029877	SMG7-201	5908	XM_012735882	ENSMICP00000029981	1136 (aa)	XP_012591336	UPI000642ABD7
ENSMICT00000058373	SMG7-202	219	-	ENSMICP00000046481	73 (aa)	-	UPI0001D3BD71
ENSMICT00000059839	SMG7-206	579	-	ENSMICP00000044705	192 (aa)	-	UPI000C2ED3A1

Gene Model

Click here to download ENSMICG00000007145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007145	SMG7	100	98.417	ENSG00000116698	SMG7	100	98.417	Homo_sapiens
ENSMICG00000007145	SMG7	82	93.038	ENSAPOG00000009611	smg7	95	74.471	Acanthochromis_polyacanthus
ENSMICG00000007145	SMG7	99	97.252	ENSAMEG00000002357	SMG7	99	97.252	Ailuropoda_melanoleuca
ENSMICG00000007145	SMG7	97	64.706	ENSACIG00000015152	smg7	100	65.539	Amphilophus_citrinellus
ENSMICG00000007145	SMG7	81	94.194	ENSAOCG00000013538	smg7	99	66.923	Amphiprion_ocellaris
ENSMICG00000007145	SMG7	81	94.194	ENSAPEG00000007851	smg7	99	66.781	Amphiprion_percula
ENSMICG00000007145	SMG7	82	94.268	ENSATEG00000006931	smg7	99	66.299	Anabas_testudineus
ENSMICG00000007145	SMG7	100	88.889	ENSAPLG00000015811	SMG7	100	89.326	Anas_platyrhynchos
ENSMICG00000007145	SMG7	99	86.279	ENSACAG00000014989	SMG7	99	87.290	Anolis_carolinensis
ENSMICG00000007145	SMG7	100	98.065	ENSANAG00000028114	SMG7	100	98.065	Aotus_nancymaae
ENSMICG00000007145	SMG7	81	94.231	ENSACLG00000022079	smg7	99	66.381	Astatotilapia_calliptera
ENSMICG00000007145	SMG7	81	94.194	ENSAMXG00000020809	smg7	99	68.462	Astyanax_mexicanus
ENSMICG00000007145	SMG7	100	96.432	ENSBTAG00000008003	SMG7	100	96.130	Bos_taurus
ENSMICG00000007145	SMG7	100	97.977	ENSCJAG00000005135	SMG7	100	97.977	Callithrix_jacchus
ENSMICG00000007145	SMG7	100	97.822	ENSCAFG00000013276	SMG7	98	97.822	Canis_familiaris
ENSMICG00000007145	SMG7	100	97.822	ENSCAFG00020015475	SMG7	99	97.431	Canis_lupus_dingo
ENSMICG00000007145	SMG7	99	96.381	ENSCHIG00000018192	SMG7	99	96.381	Capra_hircus
ENSMICG00000007145	SMG7	100	97.824	ENSTSYG00000002667	SMG7	100	97.713	Carlito_syrichta
ENSMICG00000007145	SMG7	100	97.648	ENSCPOG00000008906	SMG7	99	97.648	Cavia_porcellus
ENSMICG00000007145	SMG7	100	98.241	ENSCCAG00000028596	SMG7	100	98.241	Cebus_capucinus
ENSMICG00000007145	SMG7	100	98.417	ENSCATG00000011063	SMG7	100	98.417	Cercocebus_atys
ENSMICG00000007145	SMG7	100	97.128	ENSCLAG00000010751	SMG7	100	97.128	Chinchilla_lanigera
ENSMICG00000007145	SMG7	100	98.172	ENSCSAG00000012654	SMG7	98	98.172	Chlorocebus_sabaeus
ENSMICG00000007145	SMG7	91	88.539	ENSCHOG00000010522	SMG7	93	89.589	Choloepus_hoffmanni
ENSMICG00000007145	SMG7	100	91.323	ENSCPBG00000015724	SMG7	100	91.762	Chrysemys_picta_bellii
ENSMICG00000007145	SMG7	82	51.829	ENSCING00000006953	-	95	53.571	Ciona_intestinalis
ENSMICG00000007145	SMG7	99	98.316	ENSCANG00000015680	SMG7	99	98.316	Colobus_angolensis_palliatus
ENSMICG00000007145	SMG7	100	96.084	ENSCGRG00001013705	Smg7	100	95.163	Cricetulus_griseus_chok1gshd
ENSMICG00000007145	SMG7	100	96.084	ENSCGRG00000018401	Smg7	100	96.084	Cricetulus_griseus_crigri
ENSMICG00000007145	SMG7	82	89.809	ENSCSEG00000007392	-	91	88.199	Cynoglossus_semilaevis
ENSMICG00000007145	SMG7	76	89.189	ENSCVAG00000011842	smg7	100	69.000	Cyprinodon_variegatus
ENSMICG00000007145	SMG7	81	94.839	ENSDARG00000060767	smg7	99	67.472	Danio_rerio
ENSMICG00000007145	SMG7	100	96.693	ENSDORG00000007331	Smg7	100	96.693	Dipodomys_ordii
ENSMICG00000007145	SMG7	95	96.259	ENSETEG00000002654	SMG7	99	96.259	Echinops_telfairi
ENSMICG00000007145	SMG7	100	97.911	ENSEASG00005006524	SMG7	99	97.793	Equus_asinus_asinus
ENSMICG00000007145	SMG7	100	97.998	ENSECAG00000004313	SMG7	99	97.882	Equus_caballus
ENSMICG00000007145	SMG7	94	96.956	ENSEEUG00000002024	SMG7	92	96.956	Erinaceus_europaeus
ENSMICG00000007145	SMG7	82	94.268	ENSELUG00000010293	smg7	99	66.529	Esox_lucius
ENSMICG00000007145	SMG7	100	97.909	ENSFCAG00000010900	SMG7	99	97.907	Felis_catus
ENSMICG00000007145	SMG7	96	88.384	ENSFALG00000003047	SMG7	100	85.034	Ficedula_albicollis
ENSMICG00000007145	SMG7	98	97.259	ENSFDAG00000012121	SMG7	99	97.148	Fukomys_damarensis
ENSMICG00000007145	SMG7	82	89.809	ENSFHEG00000011073	smg7	99	64.486	Fundulus_heteroclitus
ENSMICG00000007145	SMG7	82	90.446	ENSGMOG00000004916	smg7	88	74.809	Gadus_morhua
ENSMICG00000007145	SMG7	100	89.248	ENSGALG00000004667	SMG7	100	89.685	Gallus_gallus
ENSMICG00000007145	SMG7	91	85.475	ENSGAFG00000019000	smg7	99	64.569	Gambusia_affinis
ENSMICG00000007145	SMG7	82	91.720	ENSGACG00000001634	smg7	99	65.267	Gasterosteus_aculeatus
ENSMICG00000007145	SMG7	82	96.250	ENSGAGG00000024208	-	88	93.373	Gopherus_agassizii
ENSMICG00000007145	SMG7	100	98.329	ENSGGOG00000002342	SMG7	100	98.329	Gorilla_gorilla
ENSMICG00000007145	SMG7	81	94.231	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSMICG00000007145	SMG7	100	97.186	ENSHGLG00000009353	SMG7	100	97.237	Heterocephalus_glaber_female
ENSMICG00000007145	SMG7	100	97.274	ENSHGLG00100009637	-	100	97.274	Heterocephalus_glaber_male
ENSMICG00000007145	SMG7	99	89.056	ENSHGLG00100004878	-	99	89.056	Heterocephalus_glaber_male
ENSMICG00000007145	SMG7	82	84.906	ENSHCOG00000012804	-	86	85.625	Hippocampus_comes
ENSMICG00000007145	SMG7	81	94.194	ENSIPUG00000016997	smg7	99	68.586	Ictalurus_punctatus
ENSMICG00000007145	SMG7	100	98.172	ENSSTOG00000000401	SMG7	100	98.172	Ictidomys_tridecemlineatus
ENSMICG00000007145	SMG7	91	85.632	ENSJJAG00000000309	-	98	85.632	Jaculus_jaculus
ENSMICG00000007145	SMG7	99	95.057	ENSJJAG00000012351	Smg7	99	95.675	Jaculus_jaculus
ENSMICG00000007145	SMG7	69	93.182	ENSKMAG00000004900	smg7	97	70.000	Kryptolebias_marmoratus
ENSMICG00000007145	SMG7	52	62.667	ENSLBEG00000005220	-	75	64.273	Labrus_bergylta
ENSMICG00000007145	SMG7	83	91.195	ENSLBEG00000002983	smg7	99	66.437	Labrus_bergylta
ENSMICG00000007145	SMG7	83	93.750	ENSLACG00000000972	SMG7	99	76.195	Latimeria_chalumnae
ENSMICG00000007145	SMG7	83	94.340	ENSLOCG00000002010	smg7	99	69.000	Lepisosteus_oculatus
ENSMICG00000007145	SMG7	100	97.737	ENSLAFG00000008186	SMG7	100	97.737	Loxodonta_africana
ENSMICG00000007145	SMG7	100	98.259	ENSMFAG00000031653	SMG7	99	98.235	Macaca_fascicularis
ENSMICG00000007145	SMG7	100	98.346	ENSMMUG00000018458	SMG7	99	97.520	Macaca_mulatta
ENSMICG00000007145	SMG7	100	98.417	ENSMNEG00000034798	SMG7	100	98.417	Macaca_nemestrina
ENSMICG00000007145	SMG7	100	98.417	ENSMLEG00000037170	SMG7	100	98.417	Mandrillus_leucophaeus
ENSMICG00000007145	SMG7	82	92.357	ENSMAMG00000018733	smg7	84	66.844	Mastacembelus_armatus
ENSMICG00000007145	SMG7	81	94.231	ENSMZEG00005015247	smg7	99	66.295	Maylandia_zebra
ENSMICG00000007145	SMG7	97	89.039	ENSMGAG00000001561	SMG7	98	89.488	Meleagris_gallopavo
ENSMICG00000007145	SMG7	100	96.519	ENSMAUG00000019484	Smg7	100	96.519	Mesocricetus_auratus
ENSMICG00000007145	SMG7	100	96.345	ENSMOCG00000020748	Smg7	100	96.345	Microtus_ochrogaster
ENSMICG00000007145	SMG7	84	89.441	ENSMMOG00000001524	smg7	99	64.762	Mola_mola
ENSMICG00000007145	SMG7	92	92.694	ENSMODG00000007139	SMG7	99	93.359	Monodelphis_domestica
ENSMICG00000007145	SMG7	82	92.994	ENSMALG00000000061	smg7	94	68.159	Monopterus_albus
ENSMICG00000007145	SMG7	100	96.084	MGP_CAROLIEiJ_G0014704	Smg7	100	96.084	Mus_caroli
ENSMICG00000007145	SMG7	100	95.997	ENSMUSG00000042772	Smg7	100	95.997	Mus_musculus
ENSMICG00000007145	SMG7	100	95.997	MGP_PahariEiJ_G0027940	Smg7	100	95.997	Mus_pahari
ENSMICG00000007145	SMG7	100	96.084	MGP_SPRETEiJ_G0015511	Smg7	100	96.084	Mus_spretus
ENSMICG00000007145	SMG7	98	97.681	ENSMPUG00000011732	SMG7	97	97.681	Mustela_putorius_furo
ENSMICG00000007145	SMG7	99	96.734	ENSMLUG00000015417	SMG7	99	96.734	Myotis_lucifugus
ENSMICG00000007145	SMG7	100	96.603	ENSNGAG00000009836	Smg7	100	96.603	Nannospalax_galili
ENSMICG00000007145	SMG7	98	61.358	ENSNBRG00000024343	smg7	98	69.668	Neolamprologus_brichardi
ENSMICG00000007145	SMG7	100	98.593	ENSNLEG00000018018	SMG7	100	98.593	Nomascus_leucogenys
ENSMICG00000007145	SMG7	70	93.089	ENSMEUG00000004681	SMG7	73	93.089	Notamacropus_eugenii
ENSMICG00000007145	SMG7	95	85.009	ENSOPRG00000013942	SMG7	96	85.009	Ochotona_princeps
ENSMICG00000007145	SMG7	100	97.041	ENSODEG00000010390	SMG7	100	97.041	Octodon_degus
ENSMICG00000007145	SMG7	81	94.194	ENSONIG00000000277	smg7	99	65.983	Oreochromis_niloticus
ENSMICG00000007145	SMG7	98	91.489	ENSOANG00000000994	SMG7	100	91.578	Ornithorhynchus_anatinus
ENSMICG00000007145	SMG7	100	89.991	ENSOCUG00000005887	SMG7	94	90.252	Oryctolagus_cuniculus
ENSMICG00000007145	SMG7	92	84.091	ENSORLG00000007314	smg7	80	84.091	Oryzias_latipes
ENSMICG00000007145	SMG7	82	91.083	ENSORLG00020015779	smg7	99	64.594	Oryzias_latipes_hni
ENSMICG00000007145	SMG7	88	85.294	ENSORLG00015012289	smg7	99	64.200	Oryzias_latipes_hsok
ENSMICG00000007145	SMG7	82	91.083	ENSOMEG00000002328	smg7	99	64.126	Oryzias_melastigma
ENSMICG00000007145	SMG7	95	98.539	ENSOGAG00000003107	SMG7	93	98.539	Otolemur_garnettii
ENSMICG00000007145	SMG7	100	96.258	ENSOARG00000001352	SMG7	98	96.258	Ovis_aries
ENSMICG00000007145	SMG7	100	98.593	ENSPPAG00000031619	SMG7	100	98.593	Pan_paniscus
ENSMICG00000007145	SMG7	100	98.151	ENSPPRG00000011222	SMG7	100	98.151	Panthera_pardus
ENSMICG00000007145	SMG7	95	97.991	ENSPTIG00000007242	SMG7	100	96.154	Panthera_tigris_altaica
ENSMICG00000007145	SMG7	100	98.593	ENSPTRG00000001764	SMG7	100	98.593	Pan_troglodytes
ENSMICG00000007145	SMG7	100	98.417	ENSPANG00000004520	SMG7	100	98.417	Papio_anubis
ENSMICG00000007145	SMG7	84	89.441	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSMICG00000007145	SMG7	99	91.293	ENSPSIG00000012201	SMG7	99	91.645	Pelodiscus_sinensis
ENSMICG00000007145	SMG7	71	43.452	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSMICG00000007145	SMG7	82	86.076	ENSPMGG00000002179	-	93	81.065	Periophthalmus_magnuspinnatus
ENSMICG00000007145	SMG7	100	95.387	ENSPEMG00000011315	Smg7	100	95.387	Peromyscus_maniculatus_bairdii
ENSMICG00000007145	SMG7	100	93.146	ENSPCIG00000003786	SMG7	100	93.585	Phascolarctos_cinereus
ENSMICG00000007145	SMG7	81	91.613	ENSPFOG00000019219	smg7	99	64.096	Poecilia_formosa
ENSMICG00000007145	SMG7	81	91.613	ENSPLAG00000001446	smg7	99	64.513	Poecilia_latipinna
ENSMICG00000007145	SMG7	82	90.446	ENSPMEG00000005218	smg7	99	63.790	Poecilia_mexicana
ENSMICG00000007145	SMG7	82	89.809	ENSPREG00000019039	smg7	91	62.451	Poecilia_reticulata
ENSMICG00000007145	SMG7	100	98.681	ENSPPYG00000000427	SMG7	100	98.681	Pongo_abelii
ENSMICG00000007145	SMG7	94	85.609	ENSPCAG00000008360	SMG7	94	85.609	Procavia_capensis
ENSMICG00000007145	SMG7	100	99.652	ENSPCOG00000011996	SMG7	98	99.652	Propithecus_coquereli
ENSMICG00000007145	SMG7	90	91.827	ENSPVAG00000000851	SMG7	89	91.827	Pteropus_vampyrus
ENSMICG00000007145	SMG7	81	94.231	ENSPNYG00000007643	smg7	99	66.151	Pundamilia_nyererei
ENSMICG00000007145	SMG7	85	92.121	ENSPNAG00000011374	smg7	98	69.192	Pygocentrus_nattereri
ENSMICG00000007145	SMG7	100	95.391	ENSRNOG00000027962	Smg7	100	96.429	Rattus_norvegicus
ENSMICG00000007145	SMG7	100	98.329	ENSRBIG00000036316	SMG7	100	98.329	Rhinopithecus_bieti
ENSMICG00000007145	SMG7	100	98.329	ENSRROG00000035719	SMG7	100	98.329	Rhinopithecus_roxellana
ENSMICG00000007145	SMG7	99	97.970	ENSSBOG00000023454	SMG7	99	97.970	Saimiri_boliviensis_boliviensis
ENSMICG00000007145	SMG7	100	92.625	ENSSHAG00000013147	SMG7	100	92.976	Sarcophilus_harrisii
ENSMICG00000007145	SMG7	81	92.903	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSMICG00000007145	SMG7	81	94.194	ENSSMAG00000006067	smg7	100	65.361	Scophthalmus_maximus
ENSMICG00000007145	SMG7	81	94.194	ENSSDUG00000017543	smg7	100	65.437	Seriola_dumerili
ENSMICG00000007145	SMG7	82	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSMICG00000007145	SMG7	99	89.841	ENSSPUG00000002064	SMG7	99	90.283	Sphenodon_punctatus
ENSMICG00000007145	SMG7	73	94.326	ENSSPAG00000008733	smg7	100	66.811	Stegastes_partitus
ENSMICG00000007145	SMG7	100	97.650	ENSSSCG00000015558	SMG7	99	97.529	Sus_scrofa
ENSMICG00000007145	SMG7	99	89.163	ENSTGUG00000003928	SMG7	100	89.692	Taeniopygia_guttata
ENSMICG00000007145	SMG7	91	83.429	ENSTRUG00000003612	-	95	83.429	Takifugu_rubripes
ENSMICG00000007145	SMG7	81	89.103	ENSTNIG00000002802	smg7	99	63.499	Tetraodon_nigroviridis
ENSMICG00000007145	SMG7	76	96.610	ENSTBEG00000003220	SMG7	75	96.610	Tupaia_belangeri
ENSMICG00000007145	SMG7	95	97.352	ENSTTRG00000014778	SMG7	94	97.352	Tursiops_truncatus
ENSMICG00000007145	SMG7	96	93.693	ENSUAMG00000017473	SMG7	100	93.693	Ursus_americanus
ENSMICG00000007145	SMG7	96	97.723	ENSUMAG00000016389	SMG7	100	97.723	Ursus_maritimus
ENSMICG00000007145	SMG7	100	97.909	ENSVVUG00000008976	SMG7	99	97.792	Vulpes_vulpes
ENSMICG00000007145	SMG7	81	92.258	ENSXETG00000012528	smg7	100	71.986	Xenopus_tropicalis
ENSMICG00000007145	SMG7	81	92.258	ENSXMAG00000007123	smg7	99	64.807	Xiphophorus_maculatus