EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000007339 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 12178 bases
Position: chr6:10771880-10784057
Accession: 105861371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000049135	zf-U1	PF06220.12	1.4e-22	1	1
ENSMICP00000006678	zf-U1	PF06220.12	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000007338	-	537	-	ENSMICP00000006678	178 (aa)	-	UPI000C2EB034
ENSMICT00000070701	-	477	XM_012746786	ENSMICP00000049135	158 (aa)	XP_012602240	UPI000C2EBC5D

Gene Model

Click here to download ENSMICG00000007339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000007339	-	100	86.076	ENSMICG00000009130	-	100	84.177
ENSMICG00000007339	-	100	98.742	ENSMICG00000032183	-	100	98.742
ENSMICG00000007339	-	100	77.848	ENSMICG00000036552	-	93	78.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007339	-	100	99.371	ENSG00000124562	SNRPC	100	99.371	Homo_sapiens
ENSMICG00000007339	-	100	97.484	ENSAMEG00000000963	SNRPC	100	95.580	Ailuropoda_melanoleuca
ENSMICG00000007339	-	99	96.178	ENSACAG00000015721	SNRPC	91	94.479	Anolis_carolinensis
ENSMICG00000007339	-	100	99.371	ENSANAG00000019696	-	100	99.371	Aotus_nancymaae
ENSMICG00000007339	-	100	71.069	ENSANAG00000021444	-	100	70.440	Aotus_nancymaae
ENSMICG00000007339	-	100	98.742	ENSANAG00000007843	-	100	98.742	Aotus_nancymaae
ENSMICG00000007339	-	100	82.278	ENSANAG00000019726	-	100	81.395	Aotus_nancymaae
ENSMICG00000007339	-	99	84.810	ENSANAG00000020588	-	91	90.385	Aotus_nancymaae
ENSMICG00000007339	-	100	95.597	ENSANAG00000019157	-	100	95.597	Aotus_nancymaae
ENSMICG00000007339	-	100	83.019	ENSANAG00000021026	-	92	83.648	Aotus_nancymaae
ENSMICG00000007339	-	100	84.906	ENSAMXG00000032641	snrpc	100	74.843	Astyanax_mexicanus
ENSMICG00000007339	-	100	99.371	ENSBTAG00000024549	SNRPC	100	99.371	Bos_taurus
ENSMICG00000007339	-	100	99.371	ENSCJAG00000015321	-	100	99.371	Callithrix_jacchus
ENSMICG00000007339	-	100	97.484	ENSCJAG00000041822	-	100	97.484	Callithrix_jacchus
ENSMICG00000007339	-	100	98.113	ENSCJAG00000043055	-	100	98.113	Callithrix_jacchus
ENSMICG00000007339	-	100	90.566	ENSCAFG00000031775	-	100	91.195	Canis_familiaris
ENSMICG00000007339	-	100	78.616	ENSCAFG00000025525	-	100	77.500	Canis_familiaris
ENSMICG00000007339	-	74	99.153	ENSCAFG00000001231	-	93	99.153	Canis_familiaris
ENSMICG00000007339	-	100	96.875	ENSCAFG00000028988	-	100	96.875	Canis_familiaris
ENSMICG00000007339	-	100	95.597	ENSCAFG00020005758	-	100	95.597	Canis_lupus_dingo
ENSMICG00000007339	-	99	84.713	ENSCAFG00020009944	-	90	86.624	Canis_lupus_dingo
ENSMICG00000007339	-	100	99.371	ENSCAFG00020005945	-	100	99.371	Canis_lupus_dingo
ENSMICG00000007339	-	100	78.090	ENSCAFG00020026577	-	100	81.461	Canis_lupus_dingo
ENSMICG00000007339	-	100	90.566	ENSCAFG00020017383	-	100	91.195	Canis_lupus_dingo
ENSMICG00000007339	-	100	98.742	ENSCHIG00000012087	-	100	98.742	Capra_hircus
ENSMICG00000007339	-	100	73.418	ENSCHIG00000005039	-	100	72.152	Capra_hircus
ENSMICG00000007339	-	100	99.371	ENSTSYG00000011216	-	100	99.371	Carlito_syrichta
ENSMICG00000007339	-	100	80.503	ENSTSYG00000025721	-	100	74.214	Carlito_syrichta
ENSMICG00000007339	-	89	99.296	ENSCAPG00000005161	SNRPC	100	99.296	Cavia_aperea
ENSMICG00000007339	-	100	99.371	ENSCPOG00000008563	SNRPC	100	99.371	Cavia_porcellus
ENSMICG00000007339	-	99	74.522	ENSCCAG00000026624	-	66	71.338	Cebus_capucinus
ENSMICG00000007339	-	98	85.256	ENSCCAG00000022751	-	97	86.792	Cebus_capucinus
ENSMICG00000007339	-	100	89.308	ENSCCAG00000036059	-	89	89.308	Cebus_capucinus
ENSMICG00000007339	-	98	73.077	ENSCCAG00000022209	-	95	75.641	Cebus_capucinus
ENSMICG00000007339	-	100	67.089	ENSCCAG00000028293	-	59	89.610	Cebus_capucinus
ENSMICG00000007339	-	100	99.371	ENSCATG00000035787	SNRPC	100	99.371	Cercocebus_atys
ENSMICG00000007339	-	100	99.371	ENSCLAG00000016920	SNRPC	100	99.371	Chinchilla_lanigera
ENSMICG00000007339	-	99	81.529	ENSCLAG00000010242	-	96	80.128	Chinchilla_lanigera
ENSMICG00000007339	-	100	88.764	ENSCSAG00000009821	SNRPC	100	88.764	Chlorocebus_sabaeus
ENSMICG00000007339	-	100	81.132	ENSCHOG00000011439	SNRPC	92	78.049	Choloepus_hoffmanni
ENSMICG00000007339	-	100	96.855	ENSCPBG00000027142	SNRPC	100	96.855	Chrysemys_picta_bellii
ENSMICG00000007339	-	97	49.673	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSMICG00000007339	-	100	99.371	ENSCANG00000028035	SNRPC	100	99.371	Colobus_angolensis_palliatus
ENSMICG00000007339	-	100	80.503	ENSCGRG00001021483	-	100	81.761	Cricetulus_griseus_chok1gshd
ENSMICG00000007339	-	100	98.742	ENSCGRG00001009011	-	100	98.742	Cricetulus_griseus_chok1gshd
ENSMICG00000007339	-	99	98.089	ENSCGRG00000005005	Snrpc	100	98.113	Cricetulus_griseus_crigri
ENSMICG00000007339	-	100	83.648	ENSDARG00000009871	snrpc	100	85.535	Danio_rerio
ENSMICG00000007339	-	100	98.113	ENSDNOG00000034699	-	99	98.113	Dasypus_novemcinctus
ENSMICG00000007339	-	75	98.319	ENSDNOG00000042403	-	94	98.319	Dasypus_novemcinctus
ENSMICG00000007339	-	95	76.667	ENSDORG00000029823	-	56	96.104	Dipodomys_ordii
ENSMICG00000007339	-	100	80.503	ENSDORG00000005955	Snrpc	75	77.528	Dipodomys_ordii
ENSMICG00000007339	-	51	95.000	ENSETEG00000008756	-	94	88.660	Echinops_telfairi
ENSMICG00000007339	-	98	85.897	ENSETEG00000011265	-	100	88.462	Echinops_telfairi
ENSMICG00000007339	-	98	95.513	ENSETEG00000008268	-	100	95.513	Echinops_telfairi
ENSMICG00000007339	-	100	99.371	ENSEASG00005021007	SNRPC	100	99.371	Equus_asinus_asinus
ENSMICG00000007339	-	100	99.371	ENSECAG00000026848	SNRPC	100	99.371	Equus_caballus
ENSMICG00000007339	-	99	79.747	ENSEEUG00000014633	SNRPC	95	78.107	Erinaceus_europaeus
ENSMICG00000007339	-	100	79.245	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSMICG00000007339	-	100	99.371	ENSFCAG00000044077	-	100	99.371	Felis_catus
ENSMICG00000007339	-	100	92.453	ENSFCAG00000031775	-	88	92.453	Felis_catus
ENSMICG00000007339	-	100	98.113	ENSFALG00000003756	SNRPC	100	98.113	Ficedula_albicollis
ENSMICG00000007339	-	100	99.371	ENSFDAG00000018111	SNRPC	100	99.371	Fukomys_damarensis
ENSMICG00000007339	-	100	96.250	ENSGALG00000002773	SNRPC	100	96.250	Gallus_gallus
ENSMICG00000007339	-	100	96.855	ENSGAGG00000003063	SNRPC	100	96.855	Gopherus_agassizii
ENSMICG00000007339	-	100	99.371	ENSGGOG00000012499	SNRPC	100	99.371	Gorilla_gorilla
ENSMICG00000007339	-	100	84.810	ENSHGLG00000017741	-	100	79.114	Heterocephalus_glaber_female
ENSMICG00000007339	-	81	75.194	ENSHGLG00000005871	-	54	88.312	Heterocephalus_glaber_female
ENSMICG00000007339	-	100	99.371	ENSHGLG00000013981	SNRPC	100	99.371	Heterocephalus_glaber_female
ENSMICG00000007339	-	100	90.566	ENSHGLG00100017764	-	100	91.195	Heterocephalus_glaber_male
ENSMICG00000007339	-	100	84.810	ENSHGLG00100010786	-	100	79.114	Heterocephalus_glaber_male
ENSMICG00000007339	-	100	99.371	ENSHGLG00100009478	SNRPC	100	99.371	Heterocephalus_glaber_male
ENSMICG00000007339	-	100	85.535	ENSIPUG00000024851	snrpc	100	85.535	Ictalurus_punctatus
ENSMICG00000007339	-	100	99.371	ENSSTOG00000013786	SNRPC	100	99.371	Ictidomys_tridecemlineatus
ENSMICG00000007339	-	100	98.742	ENSJJAG00000021741	Snrpc	100	98.742	Jaculus_jaculus
ENSMICG00000007339	-	100	86.250	ENSLACG00000013753	SNRPC	89	90.000	Latimeria_chalumnae
ENSMICG00000007339	-	100	99.371	ENSLAFG00000013534	SNRPC	100	99.371	Loxodonta_africana
ENSMICG00000007339	-	100	98.742	ENSMFAG00000030525	-	100	98.742	Macaca_fascicularis
ENSMICG00000007339	-	100	99.371	ENSMFAG00000031764	-	100	99.371	Macaca_fascicularis
ENSMICG00000007339	-	100	98.113	ENSMMUG00000039415	-	100	98.113	Macaca_mulatta
ENSMICG00000007339	-	100	86.164	ENSMMUG00000045425	-	100	86.792	Macaca_mulatta
ENSMICG00000007339	-	100	98.113	ENSMMUG00000000869	-	98	97.500	Macaca_mulatta
ENSMICG00000007339	-	100	99.371	ENSMNEG00000032731	SNRPC	100	99.371	Macaca_nemestrina
ENSMICG00000007339	-	97	70.779	ENSMLEG00000039724	-	81	63.399	Mandrillus_leucophaeus
ENSMICG00000007339	-	100	99.371	ENSMLEG00000033916	-	100	99.371	Mandrillus_leucophaeus
ENSMICG00000007339	-	97	90.968	ENSMLEG00000040224	-	94	85.276	Mandrillus_leucophaeus
ENSMICG00000007339	-	100	96.226	ENSMGAG00000006054	SNRPC	100	96.226	Meleagris_gallopavo
ENSMICG00000007339	-	100	98.742	ENSMOCG00000017609	Snrpc	100	98.742	Microtus_ochrogaster
ENSMICG00000007339	-	100	98.113	ENSMODG00000013904	-	100	98.113	Monodelphis_domestica
ENSMICG00000007339	-	100	98.742	MGP_CAROLIEiJ_G0021308	Snrpc	100	98.742	Mus_caroli
ENSMICG00000007339	-	100	98.742	ENSMUSG00000024217	Snrpc	100	98.742	Mus_musculus
ENSMICG00000007339	-	74	98.305	MGP_SPRETEiJ_G0022221	-	98	98.305	Mus_spretus
ENSMICG00000007339	-	99	98.726	ENSMPUG00000003210	SNRPC	100	99.371	Mustela_putorius_furo
ENSMICG00000007339	-	99	98.726	ENSMLUG00000002488	SNRPC	100	99.371	Myotis_lucifugus
ENSMICG00000007339	-	100	98.742	ENSNGAG00000019686	Snrpc	100	98.742	Nannospalax_galili
ENSMICG00000007339	-	100	99.371	ENSNLEG00000034810	SNRPC	100	99.371	Nomascus_leucogenys
ENSMICG00000007339	-	89	98.592	ENSMEUG00000009300	SNRPC	100	98.592	Notamacropus_eugenii
ENSMICG00000007339	-	100	99.371	ENSODEG00000020370	-	100	99.371	Octodon_degus
ENSMICG00000007339	-	100	98.742	ENSODEG00000020201	-	100	98.742	Octodon_degus
ENSMICG00000007339	-	100	98.113	ENSODEG00000019633	-	100	98.113	Octodon_degus
ENSMICG00000007339	-	100	99.371	ENSODEG00000018985	-	100	99.371	Octodon_degus
ENSMICG00000007339	-	100	99.371	ENSODEG00000017080	-	100	99.371	Octodon_degus
ENSMICG00000007339	-	77	93.496	ENSODEG00000006008	-	55	97.403	Octodon_degus
ENSMICG00000007339	-	91	94.595	ENSOANG00000003405	SNRPC	100	94.595	Ornithorhynchus_anatinus
ENSMICG00000007339	-	100	99.371	ENSOCUG00000026668	-	100	99.371	Oryctolagus_cuniculus
ENSMICG00000007339	-	100	98.113	ENSOCUG00000026430	-	99	98.113	Oryctolagus_cuniculus
ENSMICG00000007339	-	100	96.855	ENSOCUG00000023292	-	100	96.855	Oryctolagus_cuniculus
ENSMICG00000007339	-	99	98.726	ENSOGAG00000008755	-	100	89.888	Otolemur_garnettii
ENSMICG00000007339	-	100	97.484	ENSOGAG00000026269	-	100	97.484	Otolemur_garnettii
ENSMICG00000007339	-	97	79.221	ENSOGAG00000028405	-	99	83.117	Otolemur_garnettii
ENSMICG00000007339	-	100	99.371	ENSOARG00000010823	SNRPC	100	99.371	Ovis_aries
ENSMICG00000007339	-	100	99.371	ENSPPAG00000043871	SNRPC	100	99.371	Pan_paniscus
ENSMICG00000007339	-	100	99.371	ENSPPRG00000008647	-	100	99.371	Panthera_pardus
ENSMICG00000007339	-	96	55.556	ENSPPRG00000016017	-	51	48.864	Panthera_pardus
ENSMICG00000007339	-	97	59.740	ENSPTIG00000013329	-	50	83.117	Panthera_tigris_altaica
ENSMICG00000007339	-	100	99.371	ENSPTIG00000021867	-	100	99.371	Panthera_tigris_altaica
ENSMICG00000007339	-	100	99.371	ENSPTRG00000018070	SNRPC	100	99.371	Pan_troglodytes
ENSMICG00000007339	-	100	99.371	ENSPANG00000022802	-	100	99.371	Papio_anubis
ENSMICG00000007339	-	100	84.906	ENSPANG00000018228	-	94	85.535	Papio_anubis
ENSMICG00000007339	-	100	82.390	ENSPKIG00000001671	SNRPC	100	81.761	Paramormyrops_kingsleyae
ENSMICG00000007339	-	99	95.541	ENSPSIG00000004876	SNRPC	77	95.541	Pelodiscus_sinensis
ENSMICG00000007339	-	100	98.742	ENSPEMG00000010773	Snrpc	100	98.742	Peromyscus_maniculatus_bairdii
ENSMICG00000007339	-	100	84.177	ENSPEMG00000002763	-	100	79.114	Peromyscus_maniculatus_bairdii
ENSMICG00000007339	-	51	100.000	ENSPPYG00000029902	-	81	100.000	Pongo_abelii
ENSMICG00000007339	-	99	98.726	ENSPCAG00000016885	SNRPC	100	92.179	Procavia_capensis
ENSMICG00000007339	-	100	99.371	ENSPCOG00000004904	SNRPC	100	99.371	Propithecus_coquereli
ENSMICG00000007339	-	99	98.089	ENSPVAG00000015597	SNRPC	100	89.503	Pteropus_vampyrus
ENSMICG00000007339	-	100	98.742	ENSRNOG00000000493	Snrpc	100	98.742	Rattus_norvegicus
ENSMICG00000007339	-	100	99.371	ENSRBIG00000037567	-	100	99.371	Rhinopithecus_bieti
ENSMICG00000007339	-	100	98.742	ENSRBIG00000014819	-	100	98.742	Rhinopithecus_bieti
ENSMICG00000007339	-	100	98.742	ENSRBIG00000022998	-	100	98.742	Rhinopithecus_bieti
ENSMICG00000007339	-	100	83.019	ENSRBIG00000036353	-	86	83.133	Rhinopithecus_bieti
ENSMICG00000007339	-	100	99.371	ENSRROG00000041300	SNRPC	100	99.371	Rhinopithecus_roxellana
ENSMICG00000007339	-	98	82.692	ENSSBOG00000023189	-	91	79.487	Saimiri_boliviensis_boliviensis
ENSMICG00000007339	-	100	99.371	ENSSBOG00000031528	-	100	99.371	Saimiri_boliviensis_boliviensis
ENSMICG00000007339	-	95	80.132	ENSSBOG00000032361	-	58	78.125	Saimiri_boliviensis_boliviensis
ENSMICG00000007339	-	98	80.000	ENSSBOG00000032882	-	93	78.065	Saimiri_boliviensis_boliviensis
ENSMICG00000007339	-	99	98.089	ENSSHAG00000000945	-	87	98.089	Sarcophilus_harrisii
ENSMICG00000007339	-	100	83.019	ENSSFOG00015019150	snrpc	100	81.761	Scleropages_formosus
ENSMICG00000007339	-	100	75.472	ENSSARG00000008970	SNRPC	96	72.515	Sorex_araneus
ENSMICG00000007339	-	100	97.484	ENSSPUG00000002502	SNRPC	100	97.484	Sphenodon_punctatus
ENSMICG00000007339	-	100	99.371	ENSSSCG00000001531	SNRPC	100	99.371	Sus_scrofa
ENSMICG00000007339	-	100	96.855	ENSTGUG00000001773	SNRPC	100	96.855	Taeniopygia_guttata
ENSMICG00000007339	-	98	91.667	ENSTBEG00000013022	-	100	90.385	Tupaia_belangeri
ENSMICG00000007339	-	98	73.077	ENSTBEG00000015356	-	55	92.208	Tupaia_belangeri
ENSMICG00000007339	-	100	97.484	ENSTTRG00000007827	SNRPC	100	95.604	Tursiops_truncatus
ENSMICG00000007339	-	75	98.319	ENSUAMG00000014125	SNRPC	80	98.319	Ursus_americanus
ENSMICG00000007339	-	100	88.764	ENSUMAG00000010869	SNRPC	100	88.764	Ursus_maritimus
ENSMICG00000007339	-	100	65.193	ENSVPAG00000003106	SNRPC	100	64.088	Vicugna_pacos
ENSMICG00000007339	-	97	89.610	ENSVVUG00000010467	-	94	83.529	Vulpes_vulpes
ENSMICG00000007339	-	100	98.113	ENSVVUG00000021947	-	100	98.113	Vulpes_vulpes
ENSMICG00000007339	-	100	89.308	ENSXETG00000024721	snrpc	100	87.421	Xenopus_tropicalis