EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000007561 (Gene tree)
Gene ID: -
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 11135 bases
Position: chr22:5877976-5889110
Accession: 28643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	1	7
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	2	7
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	3	7
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	4	7
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	5	7
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	6	7
ENSMICP00000034602	zf-C2H2	PF00096.26	3.7e-39	7	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	1	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	2	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	3	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	4	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	5	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	6	7
ENSMICP00000018769	zf-C2H2	PF00096.26	9.1e-39	7	7
ENSMICP00000034602	zf-met	PF12874.7	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000007557	ZNF550-202	1143	-	ENSMICP00000034602	380 (aa)	-	UPI00085AFC29
ENSMICT00000040818	ZNF550-201	1266	-	ENSMICP00000018769	421 (aa)	-	UPI000C2EAF45

Gene Model

Click here to download ENSMICG00000007561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000007561	ZNF550	100	46.059	ENSMICG00000003417	ZNF829	99	46.059
ENSMICG00000007561	ZNF550	60	45.128	ENSMICG00000004897	ZNF319	85	45.128
ENSMICG00000007561	ZNF550	100	51.351	ENSMICG00000031730	ZNF317	89	50.595
ENSMICG00000007561	ZNF550	99	55.947	ENSMICG00000004974	ZNF112	99	55.947
ENSMICG00000007561	ZNF550	76	65.854	ENSMICG00000004971	ZNF235	99	54.626
ENSMICG00000007561	ZNF550	99	51.244	ENSMICG00000042598	-	99	51.244
ENSMICG00000007561	ZNF550	100	54.185	ENSMICG00000037260	ZNF81	98	54.185
ENSMICG00000007561	ZNF550	99	56.140	ENSMICG00000042544	-	99	57.447
ENSMICG00000007561	ZNF550	99	52.423	ENSMICG00000033630	-	99	52.423
ENSMICG00000007561	ZNF550	60	63.333	ENSMICG00000043350	ZNF345	85	63.333
ENSMICG00000007561	ZNF550	60	55.072	ENSMICG00000037124	ZNF768	52	55.172
ENSMICG00000007561	ZNF550	99	51.942	ENSMICG00000044274	-	99	51.942
ENSMICG00000007561	ZNF550	100	39.352	ENSMICG00000009089	ZNF205	75	39.683
ENSMICG00000007561	ZNF550	99	52.632	ENSMICG00000027210	-	95	52.632
ENSMICG00000007561	ZNF550	99	60.965	ENSMICG00000012915	ZNF582	94	60.965
ENSMICG00000007561	ZNF550	74	38.667	ENSMICG00000043415	ZBTB41	50	38.667
ENSMICG00000007561	ZNF550	99	52.966	ENSMICG00000016725	ZNF233	97	52.966
ENSMICG00000007561	ZNF550	100	53.982	ENSMICG00000006390	ZNF354A	99	53.982
ENSMICG00000007561	ZNF550	78	40.000	ENSMICG00000001459	PRDM5	84	40.000
ENSMICG00000007561	ZNF550	99	45.953	ENSMICG00000031069	ZNF2	92	44.811
ENSMICG00000007561	ZNF550	60	38.318	ENSMICG00000014468	ZNF574	66	38.164
ENSMICG00000007561	ZNF550	99	56.388	ENSMICG00000016718	ZNF226	98	56.388
ENSMICG00000007561	ZNF550	99	50.885	ENSMICG00000031514	ZNF564	96	50.885
ENSMICG00000007561	ZNF550	62	44.538	ENSMICG00000034213	ZFP64	69	43.939
ENSMICG00000007561	ZNF550	99	57.709	ENSMICG00000011841	ZNF551	99	57.709
ENSMICG00000007561	ZNF550	99	40.955	ENSMICG00000015124	ZFP1	100	53.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007561	ZNF550	100	85.079	ENSG00000251369	ZNF550	100	85.079	Homo_sapiens
ENSMICG00000007561	ZNF550	100	83.246	ENSCATG00000020915	ZNF550	100	83.246	Cercocebus_atys
ENSMICG00000007561	ZNF550	100	65.013	ENSCLAG00000000250	ZNF550	95	69.786	Chinchilla_lanigera
ENSMICG00000007561	ZNF550	98	83.092	ENSCSAG00000001629	ZNF550	100	83.092	Chlorocebus_sabaeus
ENSMICG00000007561	ZNF550	100	82.984	ENSCANG00000033735	ZNF550	100	82.984	Colobus_angolensis_palliatus
ENSMICG00000007561	ZNF550	89	71.091	ENSDNOG00000033330	-	99	71.067	Dasypus_novemcinctus
ENSMICG00000007561	ZNF550	100	69.657	ENSFCAG00000034766	ZNF550	99	69.657	Felis_catus
ENSMICG00000007561	ZNF550	100	84.817	ENSGGOG00000014068	ZNF550	100	84.817	Gorilla_gorilla
ENSMICG00000007561	ZNF550	99	72.038	ENSHGLG00000018048	ZNF550	99	72.038	Heterocephalus_glaber_female
ENSMICG00000007561	ZNF550	100	83.246	ENSMFAG00000036005	ZNF550	100	83.246	Macaca_fascicularis
ENSMICG00000007561	ZNF550	100	82.984	ENSMMUG00000006122	ZNF550	100	82.984	Macaca_mulatta
ENSMICG00000007561	ZNF550	100	83.246	ENSMNEG00000041366	ZNF550	100	83.246	Macaca_nemestrina
ENSMICG00000007561	ZNF550	100	82.984	ENSMLEG00000034688	ZNF550	100	82.984	Mandrillus_leucophaeus
ENSMICG00000007561	ZNF550	100	69.129	ENSPPRG00000013475	ZNF550	99	69.129	Panthera_pardus
ENSMICG00000007561	ZNF550	100	68.000	ENSPTIG00000018007	ZNF550	80	68.072	Panthera_tigris_altaica
ENSMICG00000007561	ZNF550	100	84.817	ENSPTRG00000011560	ZNF550	100	84.817	Pan_troglodytes
ENSMICG00000007561	ZNF550	100	83.246	ENSPANG00000030602	ZNF550	100	83.246	Papio_anubis
ENSMICG00000007561	ZNF550	100	94.737	ENSPCOG00000018751	ZNF550	100	94.737	Propithecus_coquereli
ENSMICG00000007561	ZNF550	99	70.238	ENSPVAG00000000908	ZNF550	100	70.238	Pteropus_vampyrus
ENSMICG00000007561	ZNF550	100	83.508	ENSRBIG00000017275	ZNF550	100	83.508	Rhinopithecus_bieti
ENSMICG00000007561	ZNF550	100	83.508	ENSRROG00000040063	ZNF550	100	83.508	Rhinopithecus_roxellana
ENSMICG00000007561	ZNF550	98	77.670	ENSTTRG00000000293	ZNF550	100	77.670	Tursiops_truncatus