EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000007664 (Gene tree)
Gene ID: 105873126
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 7951 bases
Position: chr15:47774351-47782301
Accession: 105873126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000043981	EXOSC1	PF10447.9	9.1e-15	1	1
ENSMICP00000017621	EXOSC1	PF10447.9	2.1e-13	1	1
ENSMICP00000025032	ECR1_N	PF14382.6	5.2e-09	1	1
ENSMICP00000017621	ECR1_N	PF14382.6	5.9e-09	1	1
ENSMICP00000043981	ECR1_N	PF14382.6	6.6e-09	1	1
ENSMICP00000006969	ECR1_N	PF14382.6	7.7e-09	1	1
ENSMICP00000034649	ECR1_N	PF14382.6	8.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000029536	EXOSC1-202	573	-	ENSMICP00000034649	190 (aa)	-	UPI000C2EA818
ENSMICT00000030167	EXOSC1-205	465	-	ENSMICP00000025032	154 (aa)	-	UPI000C2EA024
ENSMICT00000069257	EXOSC1-201	893	XM_012767733	ENSMICP00000043981	211 (aa)	XP_012623187	UPI000642A3B2
ENSMICT00000007662	EXOSC1-203	537	-	ENSMICP00000006969	178 (aa)	-	UPI00085B07B4
ENSMICT00000037956	EXOSC1-204	513	-	ENSMICP00000017621	170 (aa)	-	UPI00085B38BE

Gene Model

Click here to download ENSMICG00000007664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007664	EXOSC1	100	97.059	ENSG00000171311	EXOSC1	100	97.059	Homo_sapiens
ENSMICG00000007664	EXOSC1	91	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSMICG00000007664	EXOSC1	92	98.462	ENSAMEG00000000129	EXOSC1	100	98.462	Ailuropoda_melanoleuca
ENSMICG00000007664	EXOSC1	89	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSMICG00000007664	EXOSC1	91	80.864	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSMICG00000007664	EXOSC1	91	78.395	ENSAPEG00000012690	exosc1	96	78.395	Amphiprion_percula
ENSMICG00000007664	EXOSC1	97	77.333	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSMICG00000007664	EXOSC1	91	85.492	ENSACAG00000002101	EXOSC1	99	85.492	Anolis_carolinensis
ENSMICG00000007664	EXOSC1	100	98.315	ENSANAG00000034669	EXOSC1	100	98.462	Aotus_nancymaae
ENSMICG00000007664	EXOSC1	97	77.852	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSMICG00000007664	EXOSC1	98	78.808	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSMICG00000007664	EXOSC1	92	97.949	ENSBTAG00000012699	EXOSC1	100	97.949	Bos_taurus
ENSMICG00000007664	EXOSC1	85	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSMICG00000007664	EXOSC1	100	98.052	ENSCJAG00000016586	EXOSC1	100	98.052	Callithrix_jacchus
ENSMICG00000007664	EXOSC1	100	94.313	ENSCAFG00000009068	EXOSC1	100	94.313	Canis_familiaris
ENSMICG00000007664	EXOSC1	100	94.313	ENSCAFG00020006002	EXOSC1	100	94.313	Canis_lupus_dingo
ENSMICG00000007664	EXOSC1	92	97.949	ENSCHIG00000015253	EXOSC1	100	97.949	Capra_hircus
ENSMICG00000007664	EXOSC1	100	97.647	ENSTSYG00000000760	EXOSC1	100	97.647	Carlito_syrichta
ENSMICG00000007664	EXOSC1	100	97.403	ENSCPOG00000001173	EXOSC1	100	97.949	Cavia_porcellus
ENSMICG00000007664	EXOSC1	100	61.176	ENSCCAG00000023986	EXOSC1	100	61.176	Cebus_capucinus
ENSMICG00000007664	EXOSC1	100	97.059	ENSCATG00000034114	EXOSC1	100	97.059	Cercocebus_atys
ENSMICG00000007664	EXOSC1	100	98.052	ENSCLAG00000002463	EXOSC1	100	98.462	Chinchilla_lanigera
ENSMICG00000007664	EXOSC1	92	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSMICG00000007664	EXOSC1	95	83.422	ENSCHOG00000006477	EXOSC1	100	83.422	Choloepus_hoffmanni
ENSMICG00000007664	EXOSC1	60	80.374	ENSCPBG00000011949	EXOSC1	93	78.761	Chrysemys_picta_bellii
ENSMICG00000007664	EXOSC1	95	50.267	ENSCING00000022734	-	89	56.150	Ciona_intestinalis
ENSMICG00000007664	EXOSC1	95	52.406	ENSCSAVG00000010865	-	95	58.289	Ciona_savignyi
ENSMICG00000007664	EXOSC1	100	97.059	ENSCANG00000034159	EXOSC1	100	97.059	Colobus_angolensis_palliatus
ENSMICG00000007664	EXOSC1	100	97.403	ENSCGRG00001000335	Exosc1	100	97.403	Cricetulus_griseus_chok1gshd
ENSMICG00000007664	EXOSC1	100	97.403	ENSCGRG00000011602	Exosc1	100	97.403	Cricetulus_griseus_crigri
ENSMICG00000007664	EXOSC1	98	77.711	ENSCSEG00000007895	exosc1	95	77.711	Cynoglossus_semilaevis
ENSMICG00000007664	EXOSC1	98	75.287	ENSCVAG00000016748	exosc1	99	76.042	Cyprinodon_variegatus
ENSMICG00000007664	EXOSC1	91	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSMICG00000007664	EXOSC1	70	98.649	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSMICG00000007664	EXOSC1	100	96.753	ENSDORG00000016528	Exosc1	100	97.436	Dipodomys_ordii
ENSMICG00000007664	EXOSC1	94	46.032	FBgn0032346	Csl4	92	49.206	Drosophila_melanogaster
ENSMICG00000007664	EXOSC1	92	95.385	ENSETEG00000002469	-	100	95.385	Echinops_telfairi
ENSMICG00000007664	EXOSC1	99	58.163	ENSEBUG00000008164	exosc1	98	62.245	Eptatretus_burgeri
ENSMICG00000007664	EXOSC1	100	88.830	ENSEASG00005008684	EXOSC1	100	88.830	Equus_asinus_asinus
ENSMICG00000007664	EXOSC1	86	81.098	ENSECAG00000010621	EXOSC1	100	81.098	Equus_caballus
ENSMICG00000007664	EXOSC1	92	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSMICG00000007664	EXOSC1	97	72.455	ENSELUG00000017369	exosc1	97	72.455	Esox_lucius
ENSMICG00000007664	EXOSC1	100	98.824	ENSFCAG00000040563	EXOSC1	100	98.824	Felis_catus
ENSMICG00000007664	EXOSC1	100	75.385	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSMICG00000007664	EXOSC1	92	98.462	ENSFDAG00000000846	EXOSC1	100	98.462	Fukomys_damarensis
ENSMICG00000007664	EXOSC1	91	76.042	ENSFHEG00000009154	exosc1	99	76.042	Fundulus_heteroclitus
ENSMICG00000007664	EXOSC1	91	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSMICG00000007664	EXOSC1	100	82.941	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSMICG00000007664	EXOSC1	98	75.449	ENSGAFG00000010265	exosc1	94	76.562	Gambusia_affinis
ENSMICG00000007664	EXOSC1	91	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSMICG00000007664	EXOSC1	92	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSMICG00000007664	EXOSC1	100	96.471	ENSGGOG00000003099	EXOSC1	100	96.471	Gorilla_gorilla
ENSMICG00000007664	EXOSC1	91	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSMICG00000007664	EXOSC1	100	98.052	ENSHGLG00000016927	EXOSC1	100	98.052	Heterocephalus_glaber_female
ENSMICG00000007664	EXOSC1	100	98.052	ENSHGLG00100012208	EXOSC1	100	98.052	Heterocephalus_glaber_male
ENSMICG00000007664	EXOSC1	91	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSMICG00000007664	EXOSC1	99	76.316	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSMICG00000007664	EXOSC1	100	98.052	ENSSTOG00000006615	EXOSC1	100	98.462	Ictidomys_tridecemlineatus
ENSMICG00000007664	EXOSC1	66	84.746	ENSSTOG00000029860	-	93	85.124	Ictidomys_tridecemlineatus
ENSMICG00000007664	EXOSC1	92	97.436	ENSJJAG00000013311	Exosc1	100	97.436	Jaculus_jaculus
ENSMICG00000007664	EXOSC1	98	76.923	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSMICG00000007664	EXOSC1	91	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSMICG00000007664	EXOSC1	98	74.522	ENSLOCG00000003776	exosc1	99	74.522	Lepisosteus_oculatus
ENSMICG00000007664	EXOSC1	92	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSMICG00000007664	EXOSC1	100	97.059	ENSMFAG00000001493	EXOSC1	100	97.059	Macaca_fascicularis
ENSMICG00000007664	EXOSC1	100	97.059	ENSMMUG00000020028	EXOSC1	100	97.059	Macaca_mulatta
ENSMICG00000007664	EXOSC1	100	97.059	ENSMNEG00000029816	EXOSC1	100	97.059	Macaca_nemestrina
ENSMICG00000007664	EXOSC1	100	96.753	ENSMLEG00000027643	EXOSC1	100	96.753	Mandrillus_leucophaeus
ENSMICG00000007664	EXOSC1	91	80.208	ENSMAMG00000012200	exosc1	99	80.208	Mastacembelus_armatus
ENSMICG00000007664	EXOSC1	97	77.852	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSMICG00000007664	EXOSC1	100	97.059	ENSMAUG00000020462	-	100	97.059	Mesocricetus_auratus
ENSMICG00000007664	EXOSC1	100	97.403	ENSMOCG00000006004	-	100	97.403	Microtus_ochrogaster
ENSMICG00000007664	EXOSC1	90	90.526	ENSMOCG00000017124	-	97	90.526	Microtus_ochrogaster
ENSMICG00000007664	EXOSC1	99	76.471	ENSMMOG00000021403	exosc1	99	76.471	Mola_mola
ENSMICG00000007664	EXOSC1	92	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSMICG00000007664	EXOSC1	87	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSMICG00000007664	EXOSC1	100	96.753	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.753	Mus_caroli
ENSMICG00000007664	EXOSC1	100	96.104	ENSMUSG00000034321	Exosc1	100	96.104	Mus_musculus
ENSMICG00000007664	EXOSC1	100	97.403	MGP_PahariEiJ_G0014449	Exosc1	100	97.403	Mus_pahari
ENSMICG00000007664	EXOSC1	100	96.753	MGP_SPRETEiJ_G0023880	Exosc1	100	96.753	Mus_spretus
ENSMICG00000007664	EXOSC1	92	98.462	ENSMPUG00000017044	EXOSC1	100	98.462	Mustela_putorius_furo
ENSMICG00000007664	EXOSC1	92	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSMICG00000007664	EXOSC1	92	95.897	ENSNGAG00000022033	Exosc1	100	95.897	Nannospalax_galili
ENSMICG00000007664	EXOSC1	97	77.333	ENSNBRG00000024007	exosc1	97	77.333	Neolamprologus_brichardi
ENSMICG00000007664	EXOSC1	100	96.753	ENSNLEG00000013872	EXOSC1	100	96.753	Nomascus_leucogenys
ENSMICG00000007664	EXOSC1	65	91.304	ENSMEUG00000002246	EXOSC1	100	91.304	Notamacropus_eugenii
ENSMICG00000007664	EXOSC1	92	96.410	ENSOPRG00000005065	EXOSC1	100	96.410	Ochotona_princeps
ENSMICG00000007664	EXOSC1	100	97.403	ENSODEG00000016709	EXOSC1	100	97.949	Octodon_degus
ENSMICG00000007664	EXOSC1	91	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSMICG00000007664	EXOSC1	68	93.913	ENSOANG00000006563	EXOSC1	100	91.270	Ornithorhynchus_anatinus
ENSMICG00000007664	EXOSC1	92	91.795	ENSOCUG00000026461	-	100	91.795	Oryctolagus_cuniculus
ENSMICG00000007664	EXOSC1	92	96.939	ENSOCUG00000011898	-	100	96.939	Oryctolagus_cuniculus
ENSMICG00000007664	EXOSC1	91	78.125	ENSORLG00000011595	exosc1	98	78.125	Oryzias_latipes
ENSMICG00000007664	EXOSC1	91	78.125	ENSORLG00020005831	exosc1	98	78.125	Oryzias_latipes_hni
ENSMICG00000007664	EXOSC1	91	78.125	ENSORLG00015004317	exosc1	98	78.125	Oryzias_latipes_hsok
ENSMICG00000007664	EXOSC1	97	64.162	ENSOMEG00000013907	exosc1	98	64.162	Oryzias_melastigma
ENSMICG00000007664	EXOSC1	92	98.462	ENSOGAG00000016259	EXOSC1	100	98.462	Otolemur_garnettii
ENSMICG00000007664	EXOSC1	100	93.365	ENSOARG00000010136	EXOSC1	100	97.436	Ovis_aries
ENSMICG00000007664	EXOSC1	100	96.753	ENSPPAG00000039842	EXOSC1	100	96.753	Pan_paniscus
ENSMICG00000007664	EXOSC1	100	98.824	ENSPPRG00000023366	EXOSC1	100	98.824	Panthera_pardus
ENSMICG00000007664	EXOSC1	100	98.824	ENSPTIG00000017701	EXOSC1	100	98.824	Panthera_tigris_altaica
ENSMICG00000007664	EXOSC1	100	97.059	ENSPTRG00000002808	EXOSC1	100	97.059	Pan_troglodytes
ENSMICG00000007664	EXOSC1	100	97.059	ENSPANG00000021324	EXOSC1	100	97.059	Papio_anubis
ENSMICG00000007664	EXOSC1	91	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSMICG00000007664	EXOSC1	71	81.818	ENSPSIG00000013571	EXOSC1	98	81.818	Pelodiscus_sinensis
ENSMICG00000007664	EXOSC1	98	77.108	ENSPMGG00000014002	exosc1	98	77.108	Periophthalmus_magnuspinnatus
ENSMICG00000007664	EXOSC1	100	97.403	ENSPEMG00000010710	-	100	97.403	Peromyscus_maniculatus_bairdii
ENSMICG00000007664	EXOSC1	88	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSMICG00000007664	EXOSC1	93	92.386	ENSPCIG00000002210	EXOSC1	100	92.386	Phascolarctos_cinereus
ENSMICG00000007664	EXOSC1	91	75.521	ENSPFOG00000006755	exosc1	94	75.521	Poecilia_formosa
ENSMICG00000007664	EXOSC1	92	75.159	ENSPLAG00000005880	exosc1	99	75.521	Poecilia_latipinna
ENSMICG00000007664	EXOSC1	98	74.251	ENSPMEG00000015598	exosc1	94	75.521	Poecilia_mexicana
ENSMICG00000007664	EXOSC1	98	74.251	ENSPREG00000000405	exosc1	93	74.251	Poecilia_reticulata
ENSMICG00000007664	EXOSC1	92	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSMICG00000007664	EXOSC1	92	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSMICG00000007664	EXOSC1	100	93.258	ENSPCOG00000027539	EXOSC1	100	93.846	Propithecus_coquereli
ENSMICG00000007664	EXOSC1	92	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSMICG00000007664	EXOSC1	98	78.916	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSMICG00000007664	EXOSC1	99	79.762	ENSPNAG00000001944	exosc1	99	79.762	Pygocentrus_nattereri
ENSMICG00000007664	EXOSC1	100	97.403	ENSRNOG00000048708	Exosc1	100	97.403	Rattus_norvegicus
ENSMICG00000007664	EXOSC1	100	97.059	ENSRBIG00000035618	EXOSC1	100	97.059	Rhinopithecus_bieti
ENSMICG00000007664	EXOSC1	100	97.059	ENSRROG00000032589	EXOSC1	100	97.059	Rhinopithecus_roxellana
ENSMICG00000007664	EXOSC1	100	98.315	ENSSBOG00000000359	EXOSC1	100	98.462	Saimiri_boliviensis_boliviensis
ENSMICG00000007664	EXOSC1	71	97.541	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSMICG00000007664	EXOSC1	91	82.292	ENSSFOG00015009069	exosc1	99	82.292	Scleropages_formosus
ENSMICG00000007664	EXOSC1	98	77.844	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSMICG00000007664	EXOSC1	97	78.000	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSMICG00000007664	EXOSC1	98	78.736	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSMICG00000007664	EXOSC1	98	78.736	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSMICG00000007664	EXOSC1	100	83.590	ENSSARG00000000162	EXOSC1	100	83.590	Sorex_araneus
ENSMICG00000007664	EXOSC1	92	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSMICG00000007664	EXOSC1	98	78.736	ENSSPAG00000016792	exosc1	82	78.736	Stegastes_partitus
ENSMICG00000007664	EXOSC1	97	94.146	ENSSSCG00000010518	EXOSC1	96	94.146	Sus_scrofa
ENSMICG00000007664	EXOSC1	91	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSMICG00000007664	EXOSC1	95	71.598	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSMICG00000007664	EXOSC1	90	73.575	ENSTNIG00000014079	exosc1	97	73.575	Tetraodon_nigroviridis
ENSMICG00000007664	EXOSC1	100	82.990	ENSTBEG00000006011	EXOSC1	100	89.231	Tupaia_belangeri
ENSMICG00000007664	EXOSC1	87	97.826	ENSTTRG00000009887	EXOSC1	100	97.826	Tursiops_truncatus
ENSMICG00000007664	EXOSC1	100	83.799	ENSUAMG00000010266	EXOSC1	100	83.799	Ursus_americanus
ENSMICG00000007664	EXOSC1	100	83.799	ENSUMAG00000022002	EXOSC1	100	83.799	Ursus_maritimus
ENSMICG00000007664	EXOSC1	100	94.313	ENSVVUG00000023192	EXOSC1	67	94.313	Vulpes_vulpes
ENSMICG00000007664	EXOSC1	91	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSMICG00000007664	EXOSC1	71	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSMICG00000007664	EXOSC1	98	74.850	ENSXMAG00000023382	exosc1	93	74.850	Xiphophorus_maculatus