EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000007713 (Gene tree)
Gene ID: 105867354
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 135038 bases
Position: chr2:39686604-39821641
Accession: 105867354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	1	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	2	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	3	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	4	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	5	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	6	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	7	8
ENSMICP00000007023	PUF	PF00806.19	1.6e-71	8	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	1	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	2	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	3	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	4	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	5	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	6	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	7	8
ENSMICP00000021662	PUF	PF00806.19	6.4e-71	8	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	1	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	2	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	3	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	4	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	5	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	6	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	7	8
ENSMICP00000023555	PUF	PF00806.19	1.4e-70	8	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	1	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	2	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	3	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	4	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	5	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	6	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	7	8
ENSMICP00000024783	PUF	PF00806.19	2.9e-70	8	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	1	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	2	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	3	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	4	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	5	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	6	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	7	8
ENSMICP00000034901	PUF	PF00806.19	3e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000007717	-	2835	-	ENSMICP00000007023	944 (aa)	-	UPI00085AF1AC
ENSMICT00000048213	-	3327	XM_012757324	ENSMICP00000021662	1108 (aa)	XP_012612778	UPI00063EF193
ENSMICT00000033183	-	4313	XM_012757315	ENSMICP00000034901	1193 (aa)	XP_012612769	UPI000643CC85
ENSMICT00000043788	-	4100	XM_012757319	ENSMICP00000024783	1189 (aa)	XP_012612773	UPI00063F70FF
ENSMICT00000039862	-	3809	XM_012757326	ENSMICP00000023555	1092 (aa)	XP_012612780	UPI00063F643F
ENSMICT00000066987	-	405	-	ENSMICP00000050360	134 (aa)	-	UPI000C2EC931

Gene Model

Click here to download ENSMICG00000007713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000007713	-	84	87.765	ENSMICG00000011647	PUM2	100	88.889
ENSMICG00000007713	-	99	98.592	ENSMICG00000012213	-	100	97.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007713	-	100	99.757	ENSG00000134644	PUM1	100	99.664	Homo_sapiens
ENSMICG00000007713	-	90	91.325	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSMICG00000007713	-	100	99.306	ENSAMEG00000017656	PUM1	97	99.244	Ailuropoda_melanoleuca
ENSMICG00000007713	-	100	81.188	ENSACIG00000021013	pum1	93	90.602	Amphilophus_citrinellus
ENSMICG00000007713	-	90	91.325	ENSAOCG00000003944	pum1	100	90.843	Amphiprion_ocellaris
ENSMICG00000007713	-	90	91.325	ENSAPEG00000014550	pum1	100	90.843	Amphiprion_percula
ENSMICG00000007713	-	100	91.325	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSMICG00000007713	-	100	98.551	ENSAPLG00000009351	PUM1	100	97.645	Anas_platyrhynchos
ENSMICG00000007713	-	100	98.551	ENSACAG00000000682	PUM1	98	95.627	Anolis_carolinensis
ENSMICG00000007713	-	100	99.576	ENSANAG00000027865	PUM1	100	99.576	Aotus_nancymaae
ENSMICG00000007713	-	90	76.481	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSMICG00000007713	-	100	84.615	ENSAMXG00000020607	pum1	92	92.995	Astyanax_mexicanus
ENSMICG00000007713	-	100	99.515	ENSBTAG00000018979	PUM1	100	99.517	Bos_taurus
ENSMICG00000007713	-	100	99.579	ENSCJAG00000006035	PUM1	100	99.579	Callithrix_jacchus
ENSMICG00000007713	-	100	99.306	ENSCAFG00000011205	PUM1	100	97.140	Canis_familiaris
ENSMICG00000007713	-	92	97.543	ENSCAFG00020024616	PUM1	99	98.956	Canis_lupus_dingo
ENSMICG00000007713	-	100	99.515	ENSCHIG00000012952	PUM1	100	99.278	Capra_hircus
ENSMICG00000007713	-	100	99.327	ENSTSYG00000008868	PUM1	100	99.327	Carlito_syrichta
ENSMICG00000007713	-	100	98.991	ENSCPOG00000031613	PUM1	100	98.991	Cavia_porcellus
ENSMICG00000007713	-	100	99.634	ENSCATG00000017991	PUM1	100	99.758	Cercocebus_atys
ENSMICG00000007713	-	100	99.097	ENSCLAG00000007662	PUM1	100	99.097	Chinchilla_lanigera
ENSMICG00000007713	-	100	99.306	ENSCSAG00000001028	PUM1	100	98.750	Chlorocebus_sabaeus
ENSMICG00000007713	-	99	95.977	ENSCHOG00000010245	PUM1	93	95.977	Choloepus_hoffmanni
ENSMICG00000007713	-	100	98.309	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSMICG00000007713	-	100	99.639	ENSCANG00000042606	PUM1	100	99.639	Colobus_angolensis_palliatus
ENSMICG00000007713	-	100	98.810	ENSCGRG00001024949	Pum1	100	98.810	Cricetulus_griseus_chok1gshd
ENSMICG00000007713	-	100	98.810	ENSCGRG00000014197	Pum1	100	98.810	Cricetulus_griseus_crigri
ENSMICG00000007713	-	90	75.926	ENSCSEG00000015981	pum1	100	77.521	Cynoglossus_semilaevis
ENSMICG00000007713	-	100	80.693	ENSCVAG00000007043	pum1	100	75.557	Cyprinodon_variegatus
ENSMICG00000007713	-	100	93.237	ENSDARG00000099256	pum1	95	93.750	Danio_rerio
ENSMICG00000007713	-	100	99.306	ENSDNOG00000010939	PUM1	100	98.907	Dasypus_novemcinctus
ENSMICG00000007713	-	89	98.381	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSMICG00000007713	-	85	100.000	ENSETEG00000004355	PUM1	87	93.561	Echinops_telfairi
ENSMICG00000007713	-	100	99.306	ENSEASG00005010813	PUM1	100	98.991	Equus_asinus_asinus
ENSMICG00000007713	-	100	98.991	ENSECAG00000021369	PUM1	100	98.991	Equus_caballus
ENSMICG00000007713	-	80	100.000	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSMICG00000007713	-	100	83.354	ENSELUG00000002409	pum1	95	93.237	Esox_lucius
ENSMICG00000007713	-	100	99.495	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSMICG00000007713	-	100	98.551	ENSFALG00000001214	PUM1	97	96.147	Ficedula_albicollis
ENSMICG00000007713	-	100	98.991	ENSFDAG00000011319	PUM1	100	98.991	Fukomys_damarensis
ENSMICG00000007713	-	91	90.843	ENSGMOG00000010491	pum1	94	90.361	Gadus_morhua
ENSMICG00000007713	-	100	98.551	ENSGALG00000042598	PUM1	99	98.988	Gallus_gallus
ENSMICG00000007713	-	100	80.817	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSMICG00000007713	-	100	80.788	ENSGACG00000005717	pum1	100	76.316	Gasterosteus_aculeatus
ENSMICG00000007713	-	100	98.309	ENSGAGG00000001290	PUM1	99	98.785	Gopherus_agassizii
ENSMICG00000007713	-	100	99.665	ENSGGOG00000011983	PUM1	100	99.665	Gorilla_gorilla
ENSMICG00000007713	-	100	80.817	ENSHBUG00000018718	pum1	100	76.053	Haplochromis_burtoni
ENSMICG00000007713	-	100	98.823	ENSHGLG00000013819	Pum1	100	98.823	Heterocephalus_glaber_female
ENSMICG00000007713	-	100	98.823	ENSHGLG00100008621	Pum1	100	98.823	Heterocephalus_glaber_male
ENSMICG00000007713	-	100	92.271	ENSIPUG00000020421	pum1	93	92.271	Ictalurus_punctatus
ENSMICG00000007713	-	100	99.359	ENSSTOG00000010757	PUM1	100	99.359	Ictidomys_tridecemlineatus
ENSMICG00000007713	-	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSMICG00000007713	-	100	80.322	ENSKMAG00000003481	pum1	94	90.361	Kryptolebias_marmoratus
ENSMICG00000007713	-	100	91.325	ENSLBEG00000002527	pum1	94	90.843	Labrus_bergylta
ENSMICG00000007713	-	100	88.724	ENSLACG00000017188	PUM1	99	86.678	Latimeria_chalumnae
ENSMICG00000007713	-	100	96.618	ENSLOCG00000005210	pum1	95	96.618	Lepisosteus_oculatus
ENSMICG00000007713	-	100	98.654	ENSLAFG00000003178	PUM1	100	98.654	Loxodonta_africana
ENSMICG00000007713	-	100	99.665	ENSMFAG00000010291	PUM1	100	99.758	Macaca_fascicularis
ENSMICG00000007713	-	100	99.665	ENSMMUG00000013520	PUM1	100	99.665	Macaca_mulatta
ENSMICG00000007713	-	100	99.639	ENSMNEG00000034639	PUM1	100	99.639	Macaca_nemestrina
ENSMICG00000007713	-	100	99.639	ENSMLEG00000038743	PUM1	100	99.639	Mandrillus_leucophaeus
ENSMICG00000007713	-	100	91.325	ENSMAMG00000011606	pum1	94	90.843	Mastacembelus_armatus
ENSMICG00000007713	-	100	80.817	ENSMZEG00005005834	pum1	100	76.053	Maylandia_zebra
ENSMICG00000007713	-	100	98.551	ENSMGAG00000000724	PUM1	100	97.561	Meleagris_gallopavo
ENSMICG00000007713	-	100	98.907	ENSMAUG00000022090	Pum1	100	98.907	Mesocricetus_auratus
ENSMICG00000007713	-	100	98.823	ENSMOCG00000015463	Pum1	100	98.823	Microtus_ochrogaster
ENSMICG00000007713	-	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSMICG00000007713	-	100	97.826	ENSMODG00000017067	PUM1	100	97.649	Monodelphis_domestica
ENSMICG00000007713	-	90	88.276	ENSMALG00000016399	pum1	100	90.843	Monopterus_albus
ENSMICG00000007713	-	100	99.029	MGP_CAROLIEiJ_G0026549	Pum1	100	98.570	Mus_caroli
ENSMICG00000007713	-	100	99.272	ENSMUSG00000028580	Pum1	100	98.823	Mus_musculus
ENSMICG00000007713	-	100	99.272	MGP_PahariEiJ_G0028881	Pum1	100	98.654	Mus_pahari
ENSMICG00000007713	-	100	99.272	MGP_SPRETEiJ_G0027529	Pum1	100	98.738	Mus_spretus
ENSMICG00000007713	-	100	99.306	ENSMPUG00000015454	PUM1	100	99.075	Mustela_putorius_furo
ENSMICG00000007713	-	100	99.515	ENSMLUG00000006490	PUM1	100	98.907	Myotis_lucifugus
ENSMICG00000007713	-	100	99.159	ENSNGAG00000002378	Pum1	100	99.159	Nannospalax_galili
ENSMICG00000007713	-	100	78.138	ENSNBRG00000010689	pum1	100	83.210	Neolamprologus_brichardi
ENSMICG00000007713	-	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSMICG00000007713	-	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSMICG00000007713	-	84	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSMICG00000007713	-	100	98.823	ENSODEG00000003465	PUM1	100	98.823	Octodon_degus
ENSMICG00000007713	-	100	91.084	ENSONIG00000002290	pum1	94	90.602	Oreochromis_niloticus
ENSMICG00000007713	-	80	83.269	ENSOANG00000004902	-	100	77.937	Ornithorhynchus_anatinus
ENSMICG00000007713	-	100	99.306	ENSOCUG00000008641	PUM1	99	98.738	Oryctolagus_cuniculus
ENSMICG00000007713	-	100	81.931	ENSORLG00000011482	pum1	94	90.843	Oryzias_latipes
ENSMICG00000007713	-	100	82.054	ENSORLG00020019461	pum1	100	75.967	Oryzias_latipes_hni
ENSMICG00000007713	-	100	82.054	ENSORLG00015011375	pum1	100	76.049	Oryzias_latipes_hsok
ENSMICG00000007713	-	90	93.012	ENSOMEG00000009312	pum1	100	90.602	Oryzias_melastigma
ENSMICG00000007713	-	100	98.611	ENSOGAG00000011063	PUM1	100	96.809	Otolemur_garnettii
ENSMICG00000007713	-	100	99.368	ENSOARG00000001899	PUM1	100	99.368	Ovis_aries
ENSMICG00000007713	-	100	99.665	ENSPPAG00000044003	PUM1	100	99.665	Pan_paniscus
ENSMICG00000007713	-	100	99.411	ENSPPRG00000001370	PUM1	100	99.364	Panthera_pardus
ENSMICG00000007713	-	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSMICG00000007713	-	100	99.665	ENSPTRG00000000453	PUM1	100	99.665	Pan_troglodytes
ENSMICG00000007713	-	100	99.579	ENSPANG00000016338	PUM1	100	99.758	Papio_anubis
ENSMICG00000007713	-	95	93.478	ENSPKIG00000010578	pum1	100	82.696	Paramormyrops_kingsleyae
ENSMICG00000007713	-	100	98.309	ENSPSIG00000014118	PUM1	100	97.813	Pelodiscus_sinensis
ENSMICG00000007713	-	100	76.507	ENSPMGG00000005836	pum1	100	81.663	Periophthalmus_magnuspinnatus
ENSMICG00000007713	-	100	98.991	ENSPEMG00000010009	Pum1	100	98.991	Peromyscus_maniculatus_bairdii
ENSMICG00000007713	-	100	97.904	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSMICG00000007713	-	94	90.843	ENSPFOG00000007289	pum1	93	90.361	Poecilia_formosa
ENSMICG00000007713	-	100	90.843	ENSPLAG00000007256	pum1	94	90.361	Poecilia_latipinna
ENSMICG00000007713	-	85	82.840	ENSPMEG00000019543	pum1	99	78.217	Poecilia_mexicana
ENSMICG00000007713	-	100	80.817	ENSPREG00000005195	pum1	100	80.848	Poecilia_reticulata
ENSMICG00000007713	-	100	99.306	ENSPPYG00000001621	PUM1	100	97.609	Pongo_abelii
ENSMICG00000007713	-	84	99.074	ENSPCAG00000001979	PUM1	74	99.074	Procavia_capensis
ENSMICG00000007713	-	100	100.000	ENSPCOG00000004398	PUM1	100	100.000	Propithecus_coquereli
ENSMICG00000007713	-	100	99.306	ENSPVAG00000005207	PUM1	97	97.056	Pteropus_vampyrus
ENSMICG00000007713	-	100	80.817	ENSPNYG00000009518	pum1	100	81.205	Pundamilia_nyererei
ENSMICG00000007713	-	100	93.237	ENSPNAG00000026728	pum1	95	93.237	Pygocentrus_nattereri
ENSMICG00000007713	-	100	99.272	ENSRNOG00000011709	Pum1	100	98.570	Rattus_norvegicus
ENSMICG00000007713	-	100	99.634	ENSRBIG00000042521	PUM1	100	99.758	Rhinopithecus_bieti
ENSMICG00000007713	-	100	99.757	ENSRROG00000020156	PUM1	100	99.639	Rhinopithecus_roxellana
ENSMICG00000007713	-	100	99.682	ENSSBOG00000032037	PUM1	100	99.682	Saimiri_boliviensis_boliviensis
ENSMICG00000007713	-	100	97.826	ENSSHAG00000010918	PUM1	100	97.565	Sarcophilus_harrisii
ENSMICG00000007713	-	100	80.817	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSMICG00000007713	-	100	91.325	ENSSDUG00000009021	pum1	94	90.843	Seriola_dumerili
ENSMICG00000007713	-	95	91.325	ENSSLDG00000009667	pum1	93	90.843	Seriola_lalandi_dorsalis
ENSMICG00000007713	-	99	99.306	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSMICG00000007713	-	100	98.551	ENSSPUG00000006267	PUM1	100	97.056	Sphenodon_punctatus
ENSMICG00000007713	-	90	91.325	ENSSPAG00000016636	pum1	100	90.843	Stegastes_partitus
ENSMICG00000007713	-	100	99.579	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSMICG00000007713	-	100	91.325	ENSTRUG00000013121	pum1	94	90.843	Takifugu_rubripes
ENSMICG00000007713	-	100	91.106	ENSTNIG00000016983	pum1	93	90.625	Tetraodon_nigroviridis
ENSMICG00000007713	-	93	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSMICG00000007713	-	92	99.271	ENSTTRG00000007436	PUM1	90	99.271	Tursiops_truncatus
ENSMICG00000007713	-	99	99.026	ENSUAMG00000018262	-	100	98.894	Ursus_americanus
ENSMICG00000007713	-	100	99.009	ENSUMAG00000009211	PUM1	100	99.517	Ursus_maritimus
ENSMICG00000007713	-	100	99.128	ENSVPAG00000005902	PUM1	92	99.378	Vicugna_pacos
ENSMICG00000007713	-	100	99.515	ENSVVUG00000014631	PUM1	100	99.517	Vulpes_vulpes
ENSMICG00000007713	-	100	89.130	ENSXETG00000012904	pum1	99	87.448	Xenopus_tropicalis
ENSMICG00000007713	-	100	80.817	ENSXMAG00000002945	pum1	100	77.847	Xiphophorus_maculatus