EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000007807 (Gene tree)
Gene ID: 105875629
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 21870 bases
Position: chr7:16065820-16087689
Accession: 105875629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000007100	zf-C2H2	PF00096.26	1.2e-18	1	2
ENSMICP00000007100	zf-C2H2	PF00096.26	1.2e-18	2	2
ENSMICP00000022135	zf-C2H2	PF00096.26	2.1e-18	1	2
ENSMICP00000022135	zf-C2H2	PF00096.26	2.1e-18	2	2
ENSMICP00000007100	zf-met	PF12874.7	0.00029	1	1
ENSMICP00000022135	zf-met	PF12874.7	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000007802	PRDM4-202	2398	XM_012772786	ENSMICP00000007100	761 (aa)	XP_012628240	UPI000C2ED575
ENSMICT00000048189	PRDM4-201	4244	XM_012772783	ENSMICP00000022135	801 (aa)	XP_012628237	UPI000643DC42

Gene Model

Click here to download ENSMICG00000007807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000007807	PRDM4	51	33.884	ENSMICG00000013783	PRDM15	62	33.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007807	PRDM4	100	96.629	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSMICG00000007807	PRDM4	99	96.370	ENSAMEG00000016174	PRDM4	99	96.370	Ailuropoda_melanoleuca
ENSMICG00000007807	PRDM4	99	86.466	ENSAPLG00000009846	PRDM4	99	85.965	Anas_platyrhynchos
ENSMICG00000007807	PRDM4	100	96.629	ENSANAG00000024800	PRDM4	100	96.629	Aotus_nancymaae
ENSMICG00000007807	PRDM4	100	96.005	ENSBTAG00000012999	PRDM4	100	96.005	Bos_taurus
ENSMICG00000007807	PRDM4	100	96.629	ENSCJAG00000015261	PRDM4	100	96.629	Callithrix_jacchus
ENSMICG00000007807	PRDM4	100	96.380	ENSCAFG00000001788	PRDM4	100	96.380	Canis_familiaris
ENSMICG00000007807	PRDM4	100	96.380	ENSCAFG00020004916	PRDM4	100	96.380	Canis_lupus_dingo
ENSMICG00000007807	PRDM4	100	95.880	ENSCHIG00000019409	PRDM4	100	95.880	Capra_hircus
ENSMICG00000007807	PRDM4	100	96.754	ENSTSYG00000009248	PRDM4	100	96.754	Carlito_syrichta
ENSMICG00000007807	PRDM4	99	89.362	ENSCAPG00000013937	PRDM4	99	89.362	Cavia_aperea
ENSMICG00000007807	PRDM4	99	88.820	ENSCPOG00000022385	PRDM4	100	88.820	Cavia_porcellus
ENSMICG00000007807	PRDM4	100	96.879	ENSCCAG00000036033	PRDM4	100	96.879	Cebus_capucinus
ENSMICG00000007807	PRDM4	100	96.255	ENSCATG00000044797	PRDM4	100	96.255	Cercocebus_atys
ENSMICG00000007807	PRDM4	99	91.169	ENSCLAG00000007545	PRDM4	100	91.542	Chinchilla_lanigera
ENSMICG00000007807	PRDM4	100	96.504	ENSCSAG00000002896	PRDM4	100	96.504	Chlorocebus_sabaeus
ENSMICG00000007807	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSMICG00000007807	PRDM4	99	87.202	ENSCPBG00000023187	PRDM4	100	86.700	Chrysemys_picta_bellii
ENSMICG00000007807	PRDM4	100	96.380	ENSCANG00000021804	PRDM4	100	96.380	Colobus_angolensis_palliatus
ENSMICG00000007807	PRDM4	99	92.164	ENSCGRG00001015102	-	100	91.915	Cricetulus_griseus_chok1gshd
ENSMICG00000007807	PRDM4	99	92.105	ENSCGRG00000004044	-	100	91.871	Cricetulus_griseus_crigri
ENSMICG00000007807	PRDM4	100	95.256	ENSDNOG00000032478	PRDM4	100	95.272	Dasypus_novemcinctus
ENSMICG00000007807	PRDM4	99	80.552	ENSDORG00000015081	-	100	80.803	Dipodomys_ordii
ENSMICG00000007807	PRDM4	93	45.798	ENSEBUG00000003775	prdm4	99	46.122	Eptatretus_burgeri
ENSMICG00000007807	PRDM4	100	96.255	ENSECAG00000015423	PRDM4	100	96.255	Equus_caballus
ENSMICG00000007807	PRDM4	99	92.011	ENSEEUG00000006569	PRDM4	99	91.744	Erinaceus_europaeus
ENSMICG00000007807	PRDM4	99	60.334	ENSELUG00000015265	prdm4	93	62.597	Esox_lucius
ENSMICG00000007807	PRDM4	100	96.754	ENSFCAG00000022478	PRDM4	100	96.754	Felis_catus
ENSMICG00000007807	PRDM4	99	86.826	ENSFALG00000013342	PRDM4	100	86.449	Ficedula_albicollis
ENSMICG00000007807	PRDM4	100	86.052	ENSGALG00000012619	PRDM4	100	85.554	Gallus_gallus
ENSMICG00000007807	PRDM4	99	86.341	ENSGAGG00000002763	PRDM4	95	86.341	Gopherus_agassizii
ENSMICG00000007807	PRDM4	99	96.500	ENSGGOG00000001244	PRDM4	99	96.500	Gorilla_gorilla
ENSMICG00000007807	PRDM4	99	92.848	ENSHGLG00000004590	PRDM4	98	92.472	Heterocephalus_glaber_female
ENSMICG00000007807	PRDM4	99	91.801	ENSHGLG00100007464	PRDM4	100	91.429	Heterocephalus_glaber_male
ENSMICG00000007807	PRDM4	95	60.751	ENSIPUG00000024162	prdm4	93	61.097	Ictalurus_punctatus
ENSMICG00000007807	PRDM4	100	96.005	ENSSTOG00000016168	PRDM4	100	96.005	Ictidomys_tridecemlineatus
ENSMICG00000007807	PRDM4	82	93.548	ENSJJAG00000022448	-	95	93.548	Jaculus_jaculus
ENSMICG00000007807	PRDM4	99	71.990	ENSLACG00000007452	PRDM4	99	72.153	Latimeria_chalumnae
ENSMICG00000007807	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	51.515	Lepisosteus_oculatus
ENSMICG00000007807	PRDM4	98	95.685	ENSLAFG00000001483	PRDM4	100	95.685	Loxodonta_africana
ENSMICG00000007807	PRDM4	100	96.629	ENSMFAG00000041862	PRDM4	100	96.629	Macaca_fascicularis
ENSMICG00000007807	PRDM4	100	96.629	ENSMMUG00000015550	PRDM4	100	96.629	Macaca_mulatta
ENSMICG00000007807	PRDM4	100	96.380	ENSMNEG00000032319	PRDM4	100	96.380	Macaca_nemestrina
ENSMICG00000007807	PRDM4	100	96.504	ENSMLEG00000039607	PRDM4	100	96.504	Mandrillus_leucophaeus
ENSMICG00000007807	PRDM4	99	78.750	ENSMGAG00000012815	PRDM4	100	78.250	Meleagris_gallopavo
ENSMICG00000007807	PRDM4	99	93.360	ENSMOCG00000000753	Prdm4	99	92.857	Microtus_ochrogaster
ENSMICG00000007807	PRDM4	99	93.493	ENSMUSG00000035529	Prdm4	100	93.225	Mus_musculus
ENSMICG00000007807	PRDM4	99	92.848	MGP_PahariEiJ_G0031398	Prdm4	100	92.884	Mus_pahari
ENSMICG00000007807	PRDM4	99	94.290	MGP_SPRETEiJ_G0016505	Prdm4	100	94.282	Mus_spretus
ENSMICG00000007807	PRDM4	99	90.150	ENSMPUG00000012238	PRDM4	99	89.401	Mustela_putorius_furo
ENSMICG00000007807	PRDM4	99	96.491	ENSMLUG00000000767	PRDM4	99	96.491	Myotis_lucifugus
ENSMICG00000007807	PRDM4	99	94.730	ENSNGAG00000018627	Prdm4	100	94.730	Nannospalax_galili
ENSMICG00000007807	PRDM4	100	96.504	ENSNLEG00000006748	PRDM4	100	96.504	Nomascus_leucogenys
ENSMICG00000007807	PRDM4	89	88.235	ENSMEUG00000004495	PRDM4	89	88.235	Notamacropus_eugenii
ENSMICG00000007807	PRDM4	88	93.801	ENSOPRG00000010192	PRDM4	89	93.801	Ochotona_princeps
ENSMICG00000007807	PRDM4	99	89.375	ENSODEG00000014750	PRDM4	99	89.250	Octodon_degus
ENSMICG00000007807	PRDM4	100	89.888	ENSOANG00000005526	PRDM4	100	89.888	Ornithorhynchus_anatinus
ENSMICG00000007807	PRDM4	93	95.708	ENSOCUG00000012859	PRDM4	96	95.708	Oryctolagus_cuniculus
ENSMICG00000007807	PRDM4	99	97.365	ENSOGAG00000011945	PRDM4	100	97.365	Otolemur_garnettii
ENSMICG00000007807	PRDM4	100	95.630	ENSOARG00000017955	PRDM4	100	95.630	Ovis_aries
ENSMICG00000007807	PRDM4	100	96.629	ENSPPAG00000038438	PRDM4	100	96.629	Pan_paniscus
ENSMICG00000007807	PRDM4	100	96.754	ENSPPRG00000004144	PRDM4	100	96.754	Panthera_pardus
ENSMICG00000007807	PRDM4	100	96.754	ENSPTIG00000005847	PRDM4	100	96.754	Panthera_tigris_altaica
ENSMICG00000007807	PRDM4	100	96.629	ENSPTRG00000005400	PRDM4	100	96.629	Pan_troglodytes
ENSMICG00000007807	PRDM4	100	96.629	ENSPANG00000022084	PRDM4	100	96.629	Papio_anubis
ENSMICG00000007807	PRDM4	99	59.334	ENSPKIG00000000875	prdm4	99	60.166	Paramormyrops_kingsleyae
ENSMICG00000007807	PRDM4	88	88.398	ENSPSIG00000012066	PRDM4	100	88.398	Pelodiscus_sinensis
ENSMICG00000007807	PRDM4	99	94.422	ENSPEMG00000014598	Prdm4	100	94.354	Peromyscus_maniculatus_bairdii
ENSMICG00000007807	PRDM4	100	87.562	ENSPCIG00000009471	PRDM4	100	87.562	Phascolarctos_cinereus
ENSMICG00000007807	PRDM4	100	96.504	ENSPPYG00000004913	PRDM4	100	96.504	Pongo_abelii
ENSMICG00000007807	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSMICG00000007807	PRDM4	100	99.251	ENSPCOG00000021060	PRDM4	100	99.251	Propithecus_coquereli
ENSMICG00000007807	PRDM4	100	95.137	ENSPVAG00000001596	PRDM4	100	95.387	Pteropus_vampyrus
ENSMICG00000007807	PRDM4	99	93.236	ENSRNOG00000004962	Prdm4	100	92.857	Rattus_norvegicus
ENSMICG00000007807	PRDM4	100	96.380	ENSRBIG00000035488	PRDM4	100	96.380	Rhinopithecus_bieti
ENSMICG00000007807	PRDM4	100	96.504	ENSRROG00000012779	PRDM4	100	96.504	Rhinopithecus_roxellana
ENSMICG00000007807	PRDM4	100	96.754	ENSSBOG00000000403	PRDM4	100	96.754	Saimiri_boliviensis_boliviensis
ENSMICG00000007807	PRDM4	99	63.424	ENSSFOG00015023358	prdm4	99	63.424	Scleropages_formosus
ENSMICG00000007807	PRDM4	100	96.130	ENSSSCG00000000160	PRDM4	100	96.130	Sus_scrofa
ENSMICG00000007807	PRDM4	99	86.842	ENSTGUG00000010962	-	99	86.466	Taeniopygia_guttata
ENSMICG00000007807	PRDM4	84	88.737	ENSTBEG00000001732	PRDM4	84	88.737	Tupaia_belangeri
ENSMICG00000007807	PRDM4	100	95.506	ENSTTRG00000011056	PRDM4	100	95.506	Tursiops_truncatus
ENSMICG00000007807	PRDM4	100	96.629	ENSUAMG00000022796	PRDM4	100	96.629	Ursus_americanus
ENSMICG00000007807	PRDM4	100	96.629	ENSUMAG00000017231	PRDM4	100	96.629	Ursus_maritimus
ENSMICG00000007807	PRDM4	99	96.487	ENSVPAG00000002215	PRDM4	100	96.487	Vicugna_pacos
ENSMICG00000007807	PRDM4	100	96.380	ENSVVUG00000023397	PRDM4	100	96.380	Vulpes_vulpes