EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000007835 (Gene tree)
Gene ID: 105866559
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 214042 bases
Position: chr8:119519379-119733420
Accession: 105866559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000019450	S1	PF00575.23	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000040009	SRBD1-201	3673	XM_012755966	ENSMICP00000019450	995 (aa)	XP_012611420	UPI000642AF05

Gene Model

Click here to download ENSMICG00000007835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000007835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000007835	SRBD1	100	92.068	ENSG00000068784	SRBD1	100	92.068	Homo_sapiens
ENSMICG00000007835	SRBD1	100	51.953	ENSAPOG00000005103	si:ch211-117n7.8	83	58.560	Acanthochromis_polyacanthus
ENSMICG00000007835	SRBD1	100	92.864	ENSAMEG00000005993	SRBD1	100	92.864	Ailuropoda_melanoleuca
ENSMICG00000007835	SRBD1	95	54.046	ENSACIG00000009875	si:ch211-117n7.8	97	53.783	Amphilophus_citrinellus
ENSMICG00000007835	SRBD1	99	52.348	ENSAOCG00000024718	si:ch211-117n7.8	94	54.180	Amphiprion_ocellaris
ENSMICG00000007835	SRBD1	96	53.299	ENSAPEG00000002645	si:ch211-117n7.8	99	53.299	Amphiprion_percula
ENSMICG00000007835	SRBD1	84	58.167	ENSATEG00000010844	si:ch211-117n7.8	84	58.167	Anabas_testudineus
ENSMICG00000007835	SRBD1	100	70.588	ENSAPLG00000006313	SRBD1	100	70.418	Anas_platyrhynchos
ENSMICG00000007835	SRBD1	100	92.470	ENSANAG00000025573	SRBD1	100	92.470	Aotus_nancymaae
ENSMICG00000007835	SRBD1	99	51.250	ENSACLG00000024219	si:ch211-117n7.8	94	52.863	Astatotilapia_calliptera
ENSMICG00000007835	SRBD1	86	59.516	ENSAMXG00000004294	SRBD1	93	56.604	Astyanax_mexicanus
ENSMICG00000007835	SRBD1	100	90.161	ENSBTAG00000007508	SRBD1	97	90.863	Bos_taurus
ENSMICG00000007835	SRBD1	100	91.466	ENSCJAG00000000727	SRBD1	100	91.466	Callithrix_jacchus
ENSMICG00000007835	SRBD1	100	91.775	ENSCAFG00000002554	SRBD1	100	91.775	Canis_familiaris
ENSMICG00000007835	SRBD1	100	88.956	ENSCAFG00020026284	SRBD1	99	91.986	Canis_lupus_dingo
ENSMICG00000007835	SRBD1	100	90.261	ENSCHIG00000016535	SRBD1	98	90.964	Capra_hircus
ENSMICG00000007835	SRBD1	100	93.186	ENSTSYG00000012797	SRBD1	100	93.186	Carlito_syrichta
ENSMICG00000007835	SRBD1	100	89.859	ENSCPOG00000004773	SRBD1	100	89.859	Cavia_porcellus
ENSMICG00000007835	SRBD1	100	92.570	ENSCCAG00000025589	SRBD1	100	92.570	Cebus_capucinus
ENSMICG00000007835	SRBD1	100	92.871	ENSCATG00000039530	SRBD1	100	92.871	Cercocebus_atys
ENSMICG00000007835	SRBD1	100	91.100	ENSCLAG00000008623	SRBD1	100	91.100	Chinchilla_lanigera
ENSMICG00000007835	SRBD1	100	93.173	ENSCSAG00000013350	SRBD1	100	93.173	Chlorocebus_sabaeus
ENSMICG00000007835	SRBD1	93	78.015	ENSCHOG00000003805	SRBD1	93	78.015	Choloepus_hoffmanni
ENSMICG00000007835	SRBD1	100	73.621	ENSCPBG00000005677	SRBD1	100	73.394	Chrysemys_picta_bellii
ENSMICG00000007835	SRBD1	79	42.532	ENSCING00000005950	-	99	42.532	Ciona_intestinalis
ENSMICG00000007835	SRBD1	79	42.821	ENSCSAVG00000000861	-	99	42.821	Ciona_savignyi
ENSMICG00000007835	SRBD1	99	92.455	ENSCANG00000016307	SRBD1	99	92.455	Colobus_angolensis_palliatus
ENSMICG00000007835	SRBD1	100	85.757	ENSCGRG00001000513	Srbd1	100	85.729	Cricetulus_griseus_chok1gshd
ENSMICG00000007835	SRBD1	100	85.757	ENSCGRG00000002283	Srbd1	100	85.729	Cricetulus_griseus_crigri
ENSMICG00000007835	SRBD1	84	57.377	ENSCSEG00000000856	si:ch211-117n7.8	84	57.494	Cynoglossus_semilaevis
ENSMICG00000007835	SRBD1	83	57.429	ENSCVAG00000020212	si:ch211-117n7.8	89	57.429	Cyprinodon_variegatus
ENSMICG00000007835	SRBD1	100	91.792	ENSDNOG00000018686	SRBD1	100	91.792	Dasypus_novemcinctus
ENSMICG00000007835	SRBD1	100	87.538	ENSDORG00000010468	Srbd1	100	87.538	Dipodomys_ordii
ENSMICG00000007835	SRBD1	94	34.211	FBgn0051156	CG31156	98	34.413	Drosophila_melanogaster
ENSMICG00000007835	SRBD1	89	83.393	ENSETEG00000000739	SRBD1	91	83.393	Echinops_telfairi
ENSMICG00000007835	SRBD1	73	48.163	ENSEBUG00000008902	si:ch211-117n7.8	96	48.163	Eptatretus_burgeri
ENSMICG00000007835	SRBD1	100	90.361	ENSEASG00005003132	SRBD1	97	95.541	Equus_asinus_asinus
ENSMICG00000007835	SRBD1	100	93.775	ENSECAG00000013865	SRBD1	98	93.775	Equus_caballus
ENSMICG00000007835	SRBD1	96	55.556	ENSELUG00000012592	si:ch211-117n7.8	91	55.556	Esox_lucius
ENSMICG00000007835	SRBD1	100	93.675	ENSFCAG00000005101	SRBD1	100	93.675	Felis_catus
ENSMICG00000007835	SRBD1	100	69.107	ENSFALG00000012966	SRBD1	100	68.907	Ficedula_albicollis
ENSMICG00000007835	SRBD1	98	88.386	ENSFDAG00000016670	SRBD1	98	88.669	Fukomys_damarensis
ENSMICG00000007835	SRBD1	95	53.664	ENSFHEG00000019480	si:ch211-117n7.8	93	53.664	Fundulus_heteroclitus
ENSMICG00000007835	SRBD1	50	52.027	ENSGMOG00000018010	-	100	52.027	Gadus_morhua
ENSMICG00000007835	SRBD1	100	70.319	ENSGALG00000009990	SRBD1	100	69.890	Gallus_gallus
ENSMICG00000007835	SRBD1	99	50.587	ENSGAFG00000019664	si:ch211-117n7.8	97	51.360	Gambusia_affinis
ENSMICG00000007835	SRBD1	62	62.080	ENSGACG00000010794	si:ch211-117n7.8	100	62.240	Gasterosteus_aculeatus
ENSMICG00000007835	SRBD1	84	81.175	ENSGAGG00000006166	SRBD1	99	81.175	Gopherus_agassizii
ENSMICG00000007835	SRBD1	97	92.371	ENSGGOG00000005910	SRBD1	99	92.316	Gorilla_gorilla
ENSMICG00000007835	SRBD1	95	47.730	ENSHBUG00000013207	si:ch211-117n7.8	96	47.440	Haplochromis_burtoni
ENSMICG00000007835	SRBD1	99	90.030	ENSHGLG00000018153	-	99	90.030	Heterocephalus_glaber_female
ENSMICG00000007835	SRBD1	99	89.829	ENSHGLG00100015183	-	99	89.829	Heterocephalus_glaber_male
ENSMICG00000007835	SRBD1	96	56.198	ENSIPUG00000009661	srbd1	95	56.788	Ictalurus_punctatus
ENSMICG00000007835	SRBD1	100	91.960	ENSSTOG00000005898	SRBD1	100	91.960	Ictidomys_tridecemlineatus
ENSMICG00000007835	SRBD1	100	81.244	ENSJJAG00000022244	Srbd1	100	81.244	Jaculus_jaculus
ENSMICG00000007835	SRBD1	99	51.009	ENSKMAG00000003473	si:ch211-117n7.8	90	54.171	Kryptolebias_marmoratus
ENSMICG00000007835	SRBD1	98	52.127	ENSLBEG00000027518	si:ch211-117n7.8	97	51.996	Labrus_bergylta
ENSMICG00000007835	SRBD1	85	70.922	ENSLACG00000009790	SRBD1	100	70.922	Latimeria_chalumnae
ENSMICG00000007835	SRBD1	100	58.169	ENSLOCG00000016360	si:ch211-117n7.8	97	59.369	Lepisosteus_oculatus
ENSMICG00000007835	SRBD1	100	93.273	ENSMFAG00000042026	SRBD1	100	93.273	Macaca_fascicularis
ENSMICG00000007835	SRBD1	100	92.972	ENSMMUG00000003490	SRBD1	100	92.972	Macaca_mulatta
ENSMICG00000007835	SRBD1	100	90.562	ENSMNEG00000034701	SRBD1	100	90.562	Macaca_nemestrina
ENSMICG00000007835	SRBD1	100	92.871	ENSMLEG00000000745	SRBD1	100	92.871	Mandrillus_leucophaeus
ENSMICG00000007835	SRBD1	82	57.074	ENSMAMG00000021921	si:ch211-117n7.8	85	56.659	Mastacembelus_armatus
ENSMICG00000007835	SRBD1	99	51.250	ENSMZEG00005027369	si:ch211-117n7.8	94	52.863	Maylandia_zebra
ENSMICG00000007835	SRBD1	80	75.754	ENSMGAG00000010273	SRBD1	99	75.754	Meleagris_gallopavo
ENSMICG00000007835	SRBD1	79	87.331	ENSMAUG00000013916	Srbd1	99	84.834	Mesocricetus_auratus
ENSMICG00000007835	SRBD1	100	84.824	ENSMOCG00000018716	Srbd1	100	84.824	Microtus_ochrogaster
ENSMICG00000007835	SRBD1	84	56.992	ENSMMOG00000007507	si:ch211-117n7.8	87	56.992	Mola_mola
ENSMICG00000007835	SRBD1	99	51.354	ENSMALG00000001562	si:ch211-117n7.8	94	53.026	Monopterus_albus
ENSMICG00000007835	SRBD1	100	82.430	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.615	Mus_caroli
ENSMICG00000007835	SRBD1	100	82.530	ENSMUSG00000024135	Srbd1	100	82.530	Mus_musculus
ENSMICG00000007835	SRBD1	100	81.307	MGP_PahariEiJ_G0020924	Srbd1	100	81.307	Mus_pahari
ENSMICG00000007835	SRBD1	100	82.831	MGP_SPRETEiJ_G0022850	Srbd1	100	82.831	Mus_spretus
ENSMICG00000007835	SRBD1	100	89.157	ENSMLUG00000007039	SRBD1	100	89.157	Myotis_lucifugus
ENSMICG00000007835	SRBD1	100	84.066	ENSNGAG00000011893	Srbd1	100	83.675	Nannospalax_galili
ENSMICG00000007835	SRBD1	98	50.548	ENSNBRG00000012873	si:ch211-117n7.8	96	51.925	Neolamprologus_brichardi
ENSMICG00000007835	SRBD1	100	92.269	ENSNLEG00000016877	SRBD1	100	92.269	Nomascus_leucogenys
ENSMICG00000007835	SRBD1	100	87.035	ENSODEG00000012095	SRBD1	100	87.035	Octodon_degus
ENSMICG00000007835	SRBD1	99	50.913	ENSONIG00000000945	si:ch211-117n7.8	99	58.293	Oreochromis_niloticus
ENSMICG00000007835	SRBD1	100	93.574	ENSOCUG00000015385	SRBD1	100	93.574	Oryctolagus_cuniculus
ENSMICG00000007835	SRBD1	85	54.305	ENSORLG00000004427	si:ch211-117n7.8	84	54.305	Oryzias_latipes
ENSMICG00000007835	SRBD1	99	51.161	ENSORLG00020012792	si:ch211-117n7.8	84	57.274	Oryzias_latipes_hni
ENSMICG00000007835	SRBD1	98	52.170	ENSORLG00015018598	si:ch211-117n7.8	84	57.011	Oryzias_latipes_hsok
ENSMICG00000007835	SRBD1	99	50.195	ENSOMEG00000012229	si:ch211-117n7.8	97	51.102	Oryzias_melastigma
ENSMICG00000007835	SRBD1	100	87.349	ENSOGAG00000001076	SRBD1	100	87.349	Otolemur_garnettii
ENSMICG00000007835	SRBD1	100	85.742	ENSOARG00000005958	SRBD1	100	86.421	Ovis_aries
ENSMICG00000007835	SRBD1	100	92.369	ENSPPAG00000038442	SRBD1	100	92.369	Pan_paniscus
ENSMICG00000007835	SRBD1	100	93.273	ENSPPRG00000003449	SRBD1	100	93.273	Panthera_pardus
ENSMICG00000007835	SRBD1	100	93.273	ENSPTIG00000012495	SRBD1	100	93.273	Panthera_tigris_altaica
ENSMICG00000007835	SRBD1	100	92.369	ENSPTRG00000011889	SRBD1	100	92.369	Pan_troglodytes
ENSMICG00000007835	SRBD1	100	92.871	ENSPANG00000008063	SRBD1	100	92.871	Papio_anubis
ENSMICG00000007835	SRBD1	96	54.849	ENSPKIG00000021973	si:ch211-117n7.8	97	54.668	Paramormyrops_kingsleyae
ENSMICG00000007835	SRBD1	100	73.046	ENSPSIG00000008992	SRBD1	100	73.747	Pelodiscus_sinensis
ENSMICG00000007835	SRBD1	89	53.779	ENSPMGG00000013348	si:ch211-117n7.8	98	52.405	Periophthalmus_magnuspinnatus
ENSMICG00000007835	SRBD1	100	83.710	ENSPEMG00000020684	Srbd1	100	83.710	Peromyscus_maniculatus_bairdii
ENSMICG00000007835	SRBD1	99	51.113	ENSPFOG00000010650	si:ch211-117n7.8	93	53.093	Poecilia_formosa
ENSMICG00000007835	SRBD1	99	51.022	ENSPLAG00000002141	si:ch211-117n7.8	97	51.915	Poecilia_latipinna
ENSMICG00000007835	SRBD1	99	51.210	ENSPMEG00000018537	si:ch211-117n7.8	97	52.104	Poecilia_mexicana
ENSMICG00000007835	SRBD1	99	51.137	ENSPREG00000003258	si:ch211-117n7.8	85	57.429	Poecilia_reticulata
ENSMICG00000007835	SRBD1	100	84.848	ENSPPYG00000012444	SRBD1	99	84.848	Pongo_abelii
ENSMICG00000007835	SRBD1	82	82.759	ENSPCAG00000005629	SRBD1	85	82.759	Procavia_capensis
ENSMICG00000007835	SRBD1	100	84.384	ENSPCOG00000017669	SRBD1	100	84.384	Propithecus_coquereli
ENSMICG00000007835	SRBD1	100	81.827	ENSPVAG00000001782	SRBD1	100	81.827	Pteropus_vampyrus
ENSMICG00000007835	SRBD1	95	50.894	ENSPNYG00000000508	si:ch211-117n7.8	96	50.676	Pundamilia_nyererei
ENSMICG00000007835	SRBD1	96	56.760	ENSPNAG00000013492	SRBD1	95	56.450	Pygocentrus_nattereri
ENSMICG00000007835	SRBD1	100	81.106	ENSRNOG00000014720	Srbd1	99	81.809	Rattus_norvegicus
ENSMICG00000007835	SRBD1	99	92.656	ENSRBIG00000033486	SRBD1	99	92.656	Rhinopithecus_bieti
ENSMICG00000007835	SRBD1	99	92.656	ENSRROG00000041599	SRBD1	99	92.656	Rhinopithecus_roxellana
ENSMICG00000007835	SRBD1	100	91.767	ENSSBOG00000024982	SRBD1	100	91.767	Saimiri_boliviensis_boliviensis
ENSMICG00000007835	SRBD1	94	54.697	ENSSFOG00015001128	si:ch211-117n7.8	99	54.697	Scleropages_formosus
ENSMICG00000007835	SRBD1	83	58.186	ENSSMAG00000018256	si:ch211-117n7.8	82	58.402	Scophthalmus_maximus
ENSMICG00000007835	SRBD1	95	52.899	ENSSLDG00000023189	si:ch211-117n7.8	96	52.893	Seriola_lalandi_dorsalis
ENSMICG00000007835	SRBD1	100	79.518	ENSSARG00000009740	SRBD1	100	79.518	Sorex_araneus
ENSMICG00000007835	SRBD1	89	75.706	ENSSPUG00000010475	SRBD1	98	76.271	Sphenodon_punctatus
ENSMICG00000007835	SRBD1	84	55.347	ENSSPAG00000008092	-	96	51.742	Stegastes_partitus
ENSMICG00000007835	SRBD1	100	91.667	ENSSSCG00000008445	SRBD1	98	92.269	Sus_scrofa
ENSMICG00000007835	SRBD1	83	77.952	ENSTGUG00000003878	SRBD1	100	77.952	Taeniopygia_guttata
ENSMICG00000007835	SRBD1	99	51.060	ENSTRUG00000007080	si:ch211-117n7.8	93	57.647	Takifugu_rubripes
ENSMICG00000007835	SRBD1	99	50.828	ENSTNIG00000007464	si:ch211-117n7.8	99	50.487	Tetraodon_nigroviridis
ENSMICG00000007835	SRBD1	83	97.872	ENSTBEG00000004556	SRBD1	82	97.872	Tupaia_belangeri
ENSMICG00000007835	SRBD1	94	93.548	ENSTTRG00000011871	SRBD1	94	93.548	Tursiops_truncatus
ENSMICG00000007835	SRBD1	100	92.771	ENSUAMG00000008126	SRBD1	97	94.946	Ursus_americanus
ENSMICG00000007835	SRBD1	100	92.771	ENSUMAG00000012902	SRBD1	98	92.771	Ursus_maritimus
ENSMICG00000007835	SRBD1	91	93.943	ENSVPAG00000006825	SRBD1	100	93.943	Vicugna_pacos
ENSMICG00000007835	SRBD1	100	91.466	ENSVVUG00000005389	SRBD1	99	94.937	Vulpes_vulpes
ENSMICG00000007835	SRBD1	100	53.110	ENSXETG00000002760	srbd1	100	53.110	Xenopus_tropicalis
ENSMICG00000007835	SRBD1	99	51.113	ENSXMAG00000016861	si:ch211-117n7.8	97	52.004	Xiphophorus_maculatus