EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000008022 (Gene tree)
Gene ID: 105882683
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 10667 bases
Position: chr23:15947713-15958379
Accession: 105882683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000023317	MBD	PF01429.19	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000031925	MBD4-201	3104	XM_012785300	ENSMICP00000023317	575 (aa)	XP_012640754	UPI0006433546
ENSMICT00000008023	MBD4-202	789	-	ENSMICP00000007308	262 (aa)	-	UPI000C2ED328

Gene Model

Click here to download ENSMICG00000008022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000008022	MBD4	100	82.069	ENSG00000129071	MBD4	100	96.667	Homo_sapiens
ENSMICG00000008022	MBD4	99	77.470	ENSAMEG00000004562	MBD4	99	77.470	Ailuropoda_melanoleuca
ENSMICG00000008022	MBD4	86	41.916	ENSAOCG00000001157	mbd4	95	41.916	Amphiprion_ocellaris
ENSMICG00000008022	MBD4	86	42.292	ENSATEG00000014594	MBD4	86	42.292	Anabas_testudineus
ENSMICG00000008022	MBD4	50	72.353	ENSAMXG00000017271	mbd4	67	72.353	Astyanax_mexicanus
ENSMICG00000008022	MBD4	99	71.503	ENSBTAG00000021645	MBD4	100	71.503	Bos_taurus
ENSMICG00000008022	MBD4	100	78.893	ENSCJAG00000017293	MBD4	100	78.893	Callithrix_jacchus
ENSMICG00000008022	MBD4	99	77.083	ENSCAFG00000004867	MBD4	99	77.083	Canis_familiaris
ENSMICG00000008022	MBD4	99	77.083	ENSCAFG00020007082	MBD4	99	77.083	Canis_lupus_dingo
ENSMICG00000008022	MBD4	99	70.629	ENSCHIG00000009760	MBD4	100	70.629	Capra_hircus
ENSMICG00000008022	MBD4	100	80.311	ENSCCAG00000029796	MBD4	100	80.311	Cebus_capucinus
ENSMICG00000008022	MBD4	100	80.484	ENSCATG00000035211	MBD4	100	80.484	Cercocebus_atys
ENSMICG00000008022	MBD4	99	70.157	ENSCLAG00000008974	MBD4	100	70.157	Chinchilla_lanigera
ENSMICG00000008022	MBD4	100	79.793	ENSCSAG00000009037	MBD4	100	79.793	Chlorocebus_sabaeus
ENSMICG00000008022	MBD4	87	50.474	ENSCPBG00000014704	MBD4	90	50.474	Chrysemys_picta_bellii
ENSMICG00000008022	MBD4	100	80.138	ENSCANG00000007120	MBD4	100	80.138	Colobus_angolensis_palliatus
ENSMICG00000008022	MBD4	99	67.304	ENSCGRG00001003507	Mbd4	100	67.478	Cricetulus_griseus_chok1gshd
ENSMICG00000008022	MBD4	99	67.304	ENSCGRG00000010974	Mbd4	100	67.478	Cricetulus_griseus_crigri
ENSMICG00000008022	MBD4	99	75.567	ENSDNOG00000049619	MBD4	100	75.567	Dasypus_novemcinctus
ENSMICG00000008022	MBD4	81	65.733	ENSDORG00000000902	-	97	65.254	Dipodomys_ordii
ENSMICG00000008022	MBD4	99	80.105	ENSEASG00005014800	MBD4	100	80.105	Equus_asinus_asinus
ENSMICG00000008022	MBD4	99	79.756	ENSECAG00000022106	MBD4	100	79.756	Equus_caballus
ENSMICG00000008022	MBD4	95	61.982	ENSEEUG00000011459	MBD4	99	61.982	Erinaceus_europaeus
ENSMICG00000008022	MBD4	99	78.856	ENSFCAG00000000083	MBD4	99	78.856	Felis_catus
ENSMICG00000008022	MBD4	82	44.376	ENSFALG00000013663	MBD4	99	44.643	Ficedula_albicollis
ENSMICG00000008022	MBD4	85	40.400	ENSGMOG00000013830	mbd4	100	40.400	Gadus_morhua
ENSMICG00000008022	MBD4	86	50.485	ENSGAGG00000018644	MBD4	89	50.485	Gopherus_agassizii
ENSMICG00000008022	MBD4	100	81.034	ENSGGOG00000010698	MBD4	100	81.034	Gorilla_gorilla
ENSMICG00000008022	MBD4	99	72.600	ENSHGLG00000009034	MBD4	100	72.600	Heterocephalus_glaber_female
ENSMICG00000008022	MBD4	99	72.775	ENSHGLG00100000135	MBD4	100	72.775	Heterocephalus_glaber_male
ENSMICG00000008022	MBD4	99	74.390	ENSSTOG00000020663	MBD4	100	74.390	Ictidomys_tridecemlineatus
ENSMICG00000008022	MBD4	99	76.042	ENSLAFG00000010609	MBD4	99	76.042	Loxodonta_africana
ENSMICG00000008022	MBD4	100	79.620	ENSMFAG00000002266	MBD4	100	79.620	Macaca_fascicularis
ENSMICG00000008022	MBD4	100	79.518	ENSMMUG00000012723	MBD4	100	79.518	Macaca_mulatta
ENSMICG00000008022	MBD4	96	78.636	ENSMNEG00000029752	MBD4	99	78.636	Macaca_nemestrina
ENSMICG00000008022	MBD4	100	79.965	ENSMLEG00000024859	MBD4	100	79.965	Mandrillus_leucophaeus
ENSMICG00000008022	MBD4	67	49.873	ENSMOCG00000002466	-	97	49.873	Microtus_ochrogaster
ENSMICG00000008022	MBD4	86	59.681	ENSMODG00000006399	-	100	59.681	Monodelphis_domestica
ENSMICG00000008022	MBD4	86	43.058	ENSMALG00000021517	mbd4	87	43.058	Monopterus_albus
ENSMICG00000008022	MBD4	99	66.609	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.609	Mus_caroli
ENSMICG00000008022	MBD4	99	66.259	ENSMUSG00000030322	Mbd4	100	66.259	Mus_musculus
ENSMICG00000008022	MBD4	99	67.361	MGP_PahariEiJ_G0022511	-	100	67.361	Mus_pahari
ENSMICG00000008022	MBD4	99	65.559	MGP_SPRETEiJ_G0029788	Mbd4	100	65.559	Mus_spretus
ENSMICG00000008022	MBD4	99	75.652	ENSMPUG00000017195	MBD4	99	75.652	Mustela_putorius_furo
ENSMICG00000008022	MBD4	95	79.707	ENSMLUG00000014766	MBD4	99	79.707	Myotis_lucifugus
ENSMICG00000008022	MBD4	100	81.834	ENSNLEG00000005337	MBD4	100	81.834	Nomascus_leucogenys
ENSMICG00000008022	MBD4	51	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSMICG00000008022	MBD4	99	64.348	ENSOPRG00000000473	MBD4	99	64.348	Ochotona_princeps
ENSMICG00000008022	MBD4	74	42.263	ENSOANG00000004589	-	99	41.778	Ornithorhynchus_anatinus
ENSMICG00000008022	MBD4	99	69.483	ENSOCUG00000013006	MBD4	100	69.483	Oryctolagus_cuniculus
ENSMICG00000008022	MBD4	99	78.397	ENSOGAG00000010236	MBD4	100	78.397	Otolemur_garnettii
ENSMICG00000008022	MBD4	99	70.629	ENSOARG00000014699	MBD4	100	70.629	Ovis_aries
ENSMICG00000008022	MBD4	100	80.862	ENSPPAG00000036528	MBD4	100	80.862	Pan_paniscus
ENSMICG00000008022	MBD4	99	77.990	ENSPPRG00000016480	MBD4	99	77.990	Panthera_pardus
ENSMICG00000008022	MBD4	100	81.552	ENSPTRG00000015377	MBD4	100	81.552	Pan_troglodytes
ENSMICG00000008022	MBD4	100	80.656	ENSPANG00000015047	MBD4	100	80.656	Papio_anubis
ENSMICG00000008022	MBD4	52	63.636	ENSPKIG00000012306	MBD4	50	63.636	Paramormyrops_kingsleyae
ENSMICG00000008022	MBD4	90	47.715	ENSPSIG00000007892	MBD4	91	47.715	Pelodiscus_sinensis
ENSMICG00000008022	MBD4	94	60.185	ENSPEMG00000006226	Mbd4	99	60.185	Peromyscus_maniculatus_bairdii
ENSMICG00000008022	MBD4	89	57.692	ENSPCIG00000002276	-	98	57.692	Phascolarctos_cinereus
ENSMICG00000008022	MBD4	100	81.174	ENSPPYG00000013417	MBD4	100	81.174	Pongo_abelii
ENSMICG00000008022	MBD4	95	69.203	ENSPCAG00000012915	MBD4	99	69.384	Procavia_capensis
ENSMICG00000008022	MBD4	99	79.029	ENSPVAG00000005238	MBD4	99	79.029	Pteropus_vampyrus
ENSMICG00000008022	MBD4	51	53.462	ENSPNAG00000000509	mbd4	67	58.590	Pygocentrus_nattereri
ENSMICG00000008022	MBD4	99	67.247	ENSRNOG00000010919	Mbd4	100	67.422	Rattus_norvegicus
ENSMICG00000008022	MBD4	100	80.656	ENSRBIG00000027722	MBD4	100	80.656	Rhinopithecus_bieti
ENSMICG00000008022	MBD4	100	80.484	ENSRROG00000029136	MBD4	100	80.484	Rhinopithecus_roxellana
ENSMICG00000008022	MBD4	99	79.514	ENSSBOG00000016810	MBD4	100	79.514	Saimiri_boliviensis_boliviensis
ENSMICG00000008022	MBD4	95	56.987	ENSSHAG00000012953	MBD4	96	56.987	Sarcophilus_harrisii
ENSMICG00000008022	MBD4	81	58.584	ENSSARG00000004496	-	80	58.584	Sorex_araneus
ENSMICG00000008022	MBD4	86	50.884	ENSSPUG00000017344	MBD4	91	50.884	Sphenodon_punctatus
ENSMICG00000008022	MBD4	99	75.350	ENSSSCG00000033303	MBD4	100	75.350	Sus_scrofa
ENSMICG00000008022	MBD4	85	40.237	ENSTNIG00000017927	mbd4	100	40.237	Tetraodon_nigroviridis
ENSMICG00000008022	MBD4	88	61.468	ENSTBEG00000003041	-	88	61.468	Tupaia_belangeri
ENSMICG00000008022	MBD4	95	78.205	ENSTTRG00000011265	MBD4	98	78.205	Tursiops_truncatus
ENSMICG00000008022	MBD4	86	78.800	ENSUAMG00000000814	MBD4	100	78.800	Ursus_americanus
ENSMICG00000008022	MBD4	99	77.661	ENSUMAG00000017542	MBD4	100	77.661	Ursus_maritimus
ENSMICG00000008022	MBD4	67	72.936	ENSVPAG00000004040	-	70	72.936	Vicugna_pacos
ENSMICG00000008022	MBD4	99	77.083	ENSVVUG00000014222	MBD4	99	77.083	Vulpes_vulpes