EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000008126 (Gene tree)
Gene ID: 105857114
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 79131 bases
Position: chr18:4952260-5031390
Accession: 105857114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000050266	XRN_N	PF03159.18	5.9e-103	1	1
ENSMICP00000007416	XRN_N	PF03159.18	6.2e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000008140	XRN2-201	5258	XM_012739218	ENSMICP00000007416	950 (aa)	XP_012594672	UPI00064394E8
ENSMICT00000066157	XRN2-202	2808	-	ENSMICP00000050266	935 (aa)	-	UPI000C2EC32B

Gene Model

Click here to download ENSMICG00000008126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000008126	XRN2	63	43.617	ENSMICG00000048948	XRN1	98	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000008126	XRN2	100	97.368	ENSG00000088930	XRN2	100	97.368	Homo_sapiens
ENSMICG00000008126	XRN2	97	71.383	ENSAPOG00000009818	xrn2	100	70.133	Acanthochromis_polyacanthus
ENSMICG00000008126	XRN2	100	97.263	ENSAMEG00000012581	XRN2	100	97.263	Ailuropoda_melanoleuca
ENSMICG00000008126	XRN2	90	70.615	ENSACIG00000015047	xrn2	95	74.856	Amphilophus_citrinellus
ENSMICG00000008126	XRN2	97	71.872	ENSAOCG00000023632	xrn2	100	70.528	Amphiprion_ocellaris
ENSMICG00000008126	XRN2	97	71.596	ENSAPEG00000014871	xrn2	100	70.336	Amphiprion_percula
ENSMICG00000008126	XRN2	95	71.181	ENSATEG00000001273	xrn2	97	70.507	Anabas_testudineus
ENSMICG00000008126	XRN2	97	82.454	ENSAPLG00000013869	XRN2	99	82.885	Anas_platyrhynchos
ENSMICG00000008126	XRN2	100	80.228	ENSACAG00000005565	XRN2	100	80.228	Anolis_carolinensis
ENSMICG00000008126	XRN2	100	96.737	ENSANAG00000020126	XRN2	100	96.737	Aotus_nancymaae
ENSMICG00000008126	XRN2	90	73.757	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSMICG00000008126	XRN2	100	70.905	ENSAMXG00000018301	xrn2	100	70.905	Astyanax_mexicanus
ENSMICG00000008126	XRN2	100	95.478	ENSBTAG00000011304	XRN2	100	95.478	Bos_taurus
ENSMICG00000008126	XRN2	87	55.698	WBGene00006964	xrn-2	89	54.977	Caenorhabditis_elegans
ENSMICG00000008126	XRN2	100	96.842	ENSCJAG00000005611	XRN2	100	96.842	Callithrix_jacchus
ENSMICG00000008126	XRN2	100	97.368	ENSCAFG00000005185	XRN2	100	97.368	Canis_familiaris
ENSMICG00000008126	XRN2	100	97.368	ENSCAFG00020027479	XRN2	100	97.368	Canis_lupus_dingo
ENSMICG00000008126	XRN2	100	95.478	ENSCHIG00000006921	XRN2	100	95.478	Capra_hircus
ENSMICG00000008126	XRN2	100	96.737	ENSTSYG00000008315	XRN2	100	96.737	Carlito_syrichta
ENSMICG00000008126	XRN2	97	82.391	ENSCAPG00000010773	XRN2	99	82.283	Cavia_aperea
ENSMICG00000008126	XRN2	100	97.053	ENSCPOG00000009407	XRN2	100	97.053	Cavia_porcellus
ENSMICG00000008126	XRN2	100	97.684	ENSCATG00000040350	XRN2	100	97.684	Cercocebus_atys
ENSMICG00000008126	XRN2	100	97.368	ENSCLAG00000013419	XRN2	100	97.368	Chinchilla_lanigera
ENSMICG00000008126	XRN2	100	97.684	ENSCSAG00000011094	XRN2	100	97.684	Chlorocebus_sabaeus
ENSMICG00000008126	XRN2	69	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSMICG00000008126	XRN2	100	84.167	ENSCPBG00000023533	XRN2	100	84.792	Chrysemys_picta_bellii
ENSMICG00000008126	XRN2	86	59.905	ENSCING00000022336	-	100	60.263	Ciona_intestinalis
ENSMICG00000008126	XRN2	87	58.473	ENSCSAVG00000011217	-	100	61.217	Ciona_savignyi
ENSMICG00000008126	XRN2	100	97.684	ENSCANG00000040240	XRN2	100	97.684	Colobus_angolensis_palliatus
ENSMICG00000008126	XRN2	98	96.233	ENSCGRG00001010676	Xrn2	99	96.233	Cricetulus_griseus_chok1gshd
ENSMICG00000008126	XRN2	97	95.469	ENSCGRG00000006378	Xrn2	99	95.469	Cricetulus_griseus_crigri
ENSMICG00000008126	XRN2	54	72.157	ENSCSEG00000005628	xrn2	100	72.157	Cynoglossus_semilaevis
ENSMICG00000008126	XRN2	89	71.379	ENSCVAG00000018999	xrn2	98	77.333	Cyprinodon_variegatus
ENSMICG00000008126	XRN2	100	69.815	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSMICG00000008126	XRN2	100	96.737	ENSDNOG00000001895	XRN2	100	96.737	Dasypus_novemcinctus
ENSMICG00000008126	XRN2	100	94.632	ENSDORG00000005434	Xrn2	100	94.632	Dipodomys_ordii
ENSMICG00000008126	XRN2	87	56.606	FBgn0031868	Rat1	87	56.242	Drosophila_melanogaster
ENSMICG00000008126	XRN2	100	83.789	ENSETEG00000001740	XRN2	100	83.789	Echinops_telfairi
ENSMICG00000008126	XRN2	84	70.894	ENSEBUG00000016136	xrn2	100	70.894	Eptatretus_burgeri
ENSMICG00000008126	XRN2	100	97.053	ENSEASG00005002484	XRN2	100	97.053	Equus_asinus_asinus
ENSMICG00000008126	XRN2	99	97.149	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSMICG00000008126	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSMICG00000008126	XRN2	100	70.287	ENSELUG00000000552	xrn2	100	70.522	Esox_lucius
ENSMICG00000008126	XRN2	100	97.158	ENSFCAG00000007970	XRN2	100	97.158	Felis_catus
ENSMICG00000008126	XRN2	100	81.971	ENSFALG00000004508	XRN2	100	82.390	Ficedula_albicollis
ENSMICG00000008126	XRN2	100	97.053	ENSFDAG00000016311	XRN2	100	97.053	Fukomys_damarensis
ENSMICG00000008126	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSMICG00000008126	XRN2	86	72.904	ENSGMOG00000013436	xrn2	100	72.904	Gadus_morhua
ENSMICG00000008126	XRN2	100	82.094	ENSGALG00000008372	XRN2	100	82.094	Gallus_gallus
ENSMICG00000008126	XRN2	89	73.488	ENSGAFG00000014284	xrn2	98	73.488	Gambusia_affinis
ENSMICG00000008126	XRN2	87	74.639	ENSGACG00000011870	xrn2	100	74.639	Gasterosteus_aculeatus
ENSMICG00000008126	XRN2	100	83.958	ENSGAGG00000004884	XRN2	100	84.583	Gopherus_agassizii
ENSMICG00000008126	XRN2	100	97.579	ENSGGOG00000013738	XRN2	100	97.579	Gorilla_gorilla
ENSMICG00000008126	XRN2	54	74.856	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSMICG00000008126	XRN2	100	96.105	ENSHGLG00000014831	XRN2	100	96.105	Heterocephalus_glaber_female
ENSMICG00000008126	XRN2	100	96.105	ENSHGLG00100013130	XRN2	100	96.105	Heterocephalus_glaber_male
ENSMICG00000008126	XRN2	99	68.182	ENSHCOG00000011994	xrn2	99	69.091	Hippocampus_comes
ENSMICG00000008126	XRN2	100	69.796	ENSIPUG00000006639	xrn2	100	69.796	Ictalurus_punctatus
ENSMICG00000008126	XRN2	100	97.474	ENSSTOG00000000589	XRN2	100	97.474	Ictidomys_tridecemlineatus
ENSMICG00000008126	XRN2	100	95.895	ENSJJAG00000022128	Xrn2	100	95.895	Jaculus_jaculus
ENSMICG00000008126	XRN2	54	80.078	ENSLBEG00000010041	xrn2	100	80.078	Labrus_bergylta
ENSMICG00000008126	XRN2	94	76.752	ENSLACG00000008307	XRN2	97	80.373	Latimeria_chalumnae
ENSMICG00000008126	XRN2	99	72.385	ENSLOCG00000016874	xrn2	100	72.385	Lepisosteus_oculatus
ENSMICG00000008126	XRN2	100	95.158	ENSLAFG00000014624	XRN2	100	95.158	Loxodonta_africana
ENSMICG00000008126	XRN2	100	97.684	ENSMFAG00000038122	XRN2	100	97.684	Macaca_fascicularis
ENSMICG00000008126	XRN2	100	97.684	ENSMMUG00000011405	XRN2	100	97.684	Macaca_mulatta
ENSMICG00000008126	XRN2	100	97.579	ENSMNEG00000040626	XRN2	100	97.579	Macaca_nemestrina
ENSMICG00000008126	XRN2	100	97.579	ENSMLEG00000041897	XRN2	100	97.579	Mandrillus_leucophaeus
ENSMICG00000008126	XRN2	95	72.361	ENSMAMG00000008633	xrn2	98	71.083	Mastacembelus_armatus
ENSMICG00000008126	XRN2	90	75.723	ENSMZEG00005022362	xrn2	97	75.723	Maylandia_zebra
ENSMICG00000008126	XRN2	99	80.521	ENSMGAG00000003196	XRN2	99	80.521	Meleagris_gallopavo
ENSMICG00000008126	XRN2	100	96.211	ENSMAUG00000021842	Xrn2	100	96.211	Mesocricetus_auratus
ENSMICG00000008126	XRN2	100	95.474	ENSMOCG00000012588	Xrn2	100	95.474	Microtus_ochrogaster
ENSMICG00000008126	XRN2	89	73.280	ENSMMOG00000017576	xrn2	96	75.781	Mola_mola
ENSMICG00000008126	XRN2	100	90.316	ENSMODG00000006163	XRN2	100	90.316	Monodelphis_domestica
ENSMICG00000008126	XRN2	91	72.022	ENSMALG00000011355	xrn2	95	76.482	Monopterus_albus
ENSMICG00000008126	XRN2	100	94.848	MGP_CAROLIEiJ_G0024400	Xrn2	100	94.848	Mus_caroli
ENSMICG00000008126	XRN2	100	95.058	ENSMUSG00000027433	Xrn2	100	95.058	Mus_musculus
ENSMICG00000008126	XRN2	100	94.848	MGP_PahariEiJ_G0025843	Xrn2	100	94.848	Mus_pahari
ENSMICG00000008126	XRN2	100	95.058	MGP_SPRETEiJ_G0025318	Xrn2	100	95.058	Mus_spretus
ENSMICG00000008126	XRN2	100	95.553	ENSMPUG00000001198	XRN2	93	95.553	Mustela_putorius_furo
ENSMICG00000008126	XRN2	100	96.632	ENSMLUG00000001536	XRN2	100	96.632	Myotis_lucifugus
ENSMICG00000008126	XRN2	100	96.316	ENSNGAG00000018138	Xrn2	100	96.316	Nannospalax_galili
ENSMICG00000008126	XRN2	90	75.926	ENSNBRG00000008062	xrn2	97	75.926	Neolamprologus_brichardi
ENSMICG00000008126	XRN2	100	97.579	ENSNLEG00000009991	XRN2	100	97.579	Nomascus_leucogenys
ENSMICG00000008126	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSMICG00000008126	XRN2	76	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSMICG00000008126	XRN2	98	87.810	ENSODEG00000000860	-	99	88.242	Octodon_degus
ENSMICG00000008126	XRN2	100	96.842	ENSODEG00000010745	-	100	96.842	Octodon_degus
ENSMICG00000008126	XRN2	100	71.649	ENSONIG00000018720	xrn2	100	71.856	Oreochromis_niloticus
ENSMICG00000008126	XRN2	100	90.336	ENSOANG00000015673	XRN2	100	90.336	Ornithorhynchus_anatinus
ENSMICG00000008126	XRN2	100	97.684	ENSOCUG00000013468	XRN2	100	97.684	Oryctolagus_cuniculus
ENSMICG00000008126	XRN2	98	70.270	ENSORLG00000017213	xrn2	97	74.798	Oryzias_latipes
ENSMICG00000008126	XRN2	98	70.270	ENSORLG00020001824	xrn2	100	69.929	Oryzias_latipes_hni
ENSMICG00000008126	XRN2	98	69.854	ENSORLG00015019747	xrn2	100	69.521	Oryzias_latipes_hsok
ENSMICG00000008126	XRN2	90	74.335	ENSOMEG00000019820	xrn2	100	69.442	Oryzias_melastigma
ENSMICG00000008126	XRN2	100	96.845	ENSOGAG00000001068	XRN2	100	96.845	Otolemur_garnettii
ENSMICG00000008126	XRN2	97	95.356	ENSOARG00000004443	XRN2	100	95.356	Ovis_aries
ENSMICG00000008126	XRN2	100	97.579	ENSPPAG00000033549	XRN2	100	97.579	Pan_paniscus
ENSMICG00000008126	XRN2	100	97.158	ENSPPRG00000008732	XRN2	100	97.158	Panthera_pardus
ENSMICG00000008126	XRN2	97	97.081	ENSPTIG00000015683	XRN2	97	97.081	Panthera_tigris_altaica
ENSMICG00000008126	XRN2	100	97.579	ENSPTRG00000013308	XRN2	100	97.579	Pan_troglodytes
ENSMICG00000008126	XRN2	100	97.684	ENSPANG00000018088	XRN2	100	97.684	Papio_anubis
ENSMICG00000008126	XRN2	100	70.492	ENSPKIG00000016889	xrn2	100	70.492	Paramormyrops_kingsleyae
ENSMICG00000008126	XRN2	81	86.979	ENSPSIG00000014666	XRN2	100	86.979	Pelodiscus_sinensis
ENSMICG00000008126	XRN2	100	95.579	ENSPEMG00000000111	Xrn2	100	95.579	Peromyscus_maniculatus_bairdii
ENSMICG00000008126	XRN2	100	69.470	ENSPFOG00000004182	xrn2	99	69.876	Poecilia_formosa
ENSMICG00000008126	XRN2	92	72.278	ENSPLAG00000007351	xrn2	98	72.278	Poecilia_latipinna
ENSMICG00000008126	XRN2	94	68.118	ENSPMEG00000011798	xrn2	99	68.770	Poecilia_mexicana
ENSMICG00000008126	XRN2	89	74.302	ENSPREG00000012452	xrn2	99	72.615	Poecilia_reticulata
ENSMICG00000008126	XRN2	100	97.263	ENSPPYG00000010755	XRN2	100	97.263	Pongo_abelii
ENSMICG00000008126	XRN2	100	90.231	ENSPCAG00000011191	XRN2	100	90.231	Procavia_capensis
ENSMICG00000008126	XRN2	100	91.789	ENSPCOG00000016468	XRN2	100	91.789	Propithecus_coquereli
ENSMICG00000008126	XRN2	93	94.833	ENSPVAG00000004596	XRN2	93	94.833	Pteropus_vampyrus
ENSMICG00000008126	XRN2	90	73.757	ENSPNYG00000001765	xrn2	97	73.757	Pundamilia_nyererei
ENSMICG00000008126	XRN2	100	70.684	ENSPNAG00000010956	xrn2	99	70.684	Pygocentrus_nattereri
ENSMICG00000008126	XRN2	100	95.899	ENSRNOG00000011785	Xrn2	100	95.899	Rattus_norvegicus
ENSMICG00000008126	XRN2	86	97.922	ENSRBIG00000036193	XRN2	100	97.922	Rhinopithecus_bieti
ENSMICG00000008126	XRN2	100	97.684	ENSRROG00000044400	XRN2	90	97.684	Rhinopithecus_roxellana
ENSMICG00000008126	XRN2	80	44.882	YOR048C	RAT1	65	53.606	Saccharomyces_cerevisiae
ENSMICG00000008126	XRN2	100	97.053	ENSSBOG00000021014	XRN2	100	97.053	Saimiri_boliviensis_boliviensis
ENSMICG00000008126	XRN2	100	71.694	ENSSFOG00015001091	xrn2	100	71.694	Scleropages_formosus
ENSMICG00000008126	XRN2	92	73.025	ENSSMAG00000007834	xrn2	100	68.592	Scophthalmus_maximus
ENSMICG00000008126	XRN2	91	71.833	ENSSDUG00000012802	xrn2	99	72.172	Seriola_dumerili
ENSMICG00000008126	XRN2	93	74.150	ENSSLDG00000021273	xrn2	99	74.150	Seriola_lalandi_dorsalis
ENSMICG00000008126	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSMICG00000008126	XRN2	98	79.380	ENSSPUG00000005485	XRN2	96	79.487	Sphenodon_punctatus
ENSMICG00000008126	XRN2	100	69.980	ENSSPAG00000016027	xrn2	99	69.980	Stegastes_partitus
ENSMICG00000008126	XRN2	100	95.158	ENSSSCG00000007109	XRN2	100	95.158	Sus_scrofa
ENSMICG00000008126	XRN2	100	81.002	ENSTGUG00000007535	XRN2	100	81.420	Taeniopygia_guttata
ENSMICG00000008126	XRN2	100	67.810	ENSTRUG00000015489	xrn2	100	68.182	Takifugu_rubripes
ENSMICG00000008126	XRN2	100	70.820	ENSTNIG00000010712	xrn2	100	70.820	Tetraodon_nigroviridis
ENSMICG00000008126	XRN2	100	96.316	ENSTBEG00000004119	XRN2	100	96.316	Tupaia_belangeri
ENSMICG00000008126	XRN2	93	97.117	ENSTTRG00000009087	XRN2	93	97.117	Tursiops_truncatus
ENSMICG00000008126	XRN2	100	97.368	ENSUAMG00000024634	XRN2	100	97.368	Ursus_americanus
ENSMICG00000008126	XRN2	97	97.081	ENSUMAG00000004012	XRN2	95	97.081	Ursus_maritimus
ENSMICG00000008126	XRN2	89	89.586	ENSVPAG00000010694	XRN2	91	89.586	Vicugna_pacos
ENSMICG00000008126	XRN2	100	97.263	ENSVVUG00000012178	XRN2	100	97.263	Vulpes_vulpes
ENSMICG00000008126	XRN2	100	74.089	ENSXETG00000023501	xrn2	100	74.714	Xenopus_tropicalis
ENSMICG00000008126	XRN2	100	68.345	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus