EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMICG00000008386 (Gene tree)
Gene ID
105863542
Gene Symbol
TRNAU1AP
Alias
FLJ20503|SECP43|TRSPAP1
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Minus strand
Length
33141 bases
Position
chr2:41810269-41843409
Accession
105863542
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000022852RRM_1PF00076.222.9e-2712
ENSMICP00000022852RRM_1PF00076.222.9e-2722
ENSMICP00000007630RRM_1PF00076.221.3e-1711
ENSMICP00000020298RRM_1PF00076.222.8e-1211
ENSMICP00000024600RRM_1PF00076.222.5e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000053257TRNAU1AP-2015361XM_012750761ENSMICP00000022852287 (aa)XP_012606215UPI00018B6E30
ENSMICT00000008380TRNAU1AP-203744-ENSMICP00000007630247 (aa)-UPI00085B476D
ENSMICT00000032228TRNAU1AP-2021139-ENSMICP00000024600177 (aa)-UPI000328D42F
ENSMICT00000034766TRNAU1AP-204255-ENSMICP0000002029884 (aa)-UPI00085AF830
Gene Model
Click here to download ENSMICG00000008386's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008386's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMICG00000008386TRNAU1AP7830.198ENSMICG00000002434TIA15831.034
ENSMICG00000008386TRNAU1AP7635.938ENSMICG00000029683PABPC4L9730.818
ENSMICG00000008386TRNAU1AP6034.586ENSMICG00000037857TIAL16334.586
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000008386TRNAU1AP10099.652ENSG00000180098TRNAU1AP10099.652Homo_sapiens
ENSMICG00000008386TRNAU1AP9065.789ENSAPOG00000010359-8167.105Acanthochromis_polyacanthus
ENSMICG00000008386TRNAU1AP9065.789ENSAPOG00000007188-8167.105Acanthochromis_polyacanthus
ENSMICG00000008386TRNAU1AP9858.416ENSAPOG00000007148TRNAU1AP9858.416Acanthochromis_polyacanthus
ENSMICG00000008386TRNAU1AP10098.606ENSAMEG00000011367TRNAU1AP10098.606Ailuropoda_melanoleuca
ENSMICG00000008386TRNAU1AP9170.115ENSACIG00000004161trnau1apa9370.115Amphilophus_citrinellus
ENSMICG00000008386TRNAU1AP9858.416ENSAOCG00000008056trnau1apa9858.416Amphiprion_ocellaris
ENSMICG00000008386TRNAU1AP9858.416ENSAPEG00000008868trnau1apa9858.586Amphiprion_percula
ENSMICG00000008386TRNAU1AP9858.199ENSATEG00000012140trnau1apa9856.270Anabas_testudineus
ENSMICG00000008386TRNAU1AP9493.704ENSAPLG00000002606TRNAU1AP9993.704Anas_platyrhynchos
ENSMICG00000008386TRNAU1AP9950.000ENSACAG00000004205-7451.813Anolis_carolinensis
ENSMICG00000008386TRNAU1AP9385.897ENSACAG00000003995-9976.224Anolis_carolinensis
ENSMICG00000008386TRNAU1AP10099.652ENSANAG00000018976TRNAU1AP10099.652Aotus_nancymaae
ENSMICG00000008386TRNAU1AP9859.000ENSACLG00000018515trnau1apa9860.403Astatotilapia_calliptera
ENSMICG00000008386TRNAU1AP8372.857ENSAMXG00000013750trnau1apa9456.055Astyanax_mexicanus
ENSMICG00000008386TRNAU1AP9565.556ENSAMXG00000029240-9865.556Astyanax_mexicanus
ENSMICG00000008386TRNAU1AP10099.303ENSBTAG00000010393TRNAU1AP10099.303Bos_taurus
ENSMICG00000008386TRNAU1AP100100.000ENSCJAG00000009717TRNAU1AP100100.000Callithrix_jacchus
ENSMICG00000008386TRNAU1AP10099.303ENSCAFG00000011735TRNAU1AP10099.303Canis_familiaris
ENSMICG00000008386TRNAU1AP10099.303ENSCAFG00020023584TRNAU1AP10099.303Canis_lupus_dingo
ENSMICG00000008386TRNAU1AP10099.190ENSCHIG00000023215TRNAU1AP10099.190Capra_hircus
ENSMICG00000008386TRNAU1AP100100.000ENSTSYG00000003506TRNAU1AP100100.000Carlito_syrichta
ENSMICG00000008386TRNAU1AP10098.955ENSCPOG00000001925TRNAU1AP10098.955Cavia_porcellus
ENSMICG00000008386TRNAU1AP100100.000ENSCCAG00000037506TRNAU1AP100100.000Cebus_capucinus
ENSMICG00000008386TRNAU1AP100100.000ENSCATG00000044617TRNAU1AP100100.000Cercocebus_atys
ENSMICG00000008386TRNAU1AP10098.955ENSCLAG00000008223TRNAU1AP10098.955Chinchilla_lanigera
ENSMICG00000008386TRNAU1AP10099.303ENSCSAG00000001014TRNAU1AP10099.303Chlorocebus_sabaeus
ENSMICG00000008386TRNAU1AP10093.785ENSCPBG00000000121TRNAU1AP10094.526Chrysemys_picta_bellii
ENSMICG00000008386TRNAU1AP9944.681ENSCSAVG00000011781-9844.681Ciona_savignyi
ENSMICG00000008386TRNAU1AP10099.435ENSCANG00000041949TRNAU1AP10099.435Colobus_angolensis_palliatus
ENSMICG00000008386TRNAU1AP10098.955ENSCGRG00001004713Trnau1ap10098.955Cricetulus_griseus_chok1gshd
ENSMICG00000008386TRNAU1AP10098.955ENSCGRG00000014532Trnau1ap10098.955Cricetulus_griseus_crigri
ENSMICG00000008386TRNAU1AP8771.233ENSCSEG00000006663trnau1apa9458.607Cynoglossus_semilaevis
ENSMICG00000008386TRNAU1AP9757.823ENSCVAG00000018069trnau1apa9459.341Cyprinodon_variegatus
ENSMICG00000008386TRNAU1AP8668.056ENSDARG00000101323trnau1apa8851.957Danio_rerio
ENSMICG00000008386TRNAU1AP100100.000ENSDNOG00000033009TRNAU1AP100100.000Dasypus_novemcinctus
ENSMICG00000008386TRNAU1AP8182.353ENSDNOG00000047959-9778.075Dasypus_novemcinctus
ENSMICG00000008386TRNAU1AP9991.608ENSDORG00000006349Trnau1ap100100.000Dipodomys_ordii
ENSMICG00000008386TRNAU1AP9651.493FBgn0031607CG154405152.023Drosophila_melanogaster
ENSMICG00000008386TRNAU1AP10092.090ENSETEG00000012594TRNAU1AP10094.286Echinops_telfairi
ENSMICG00000008386TRNAU1AP8561.972ENSEBUG00000006349-6059.341Eptatretus_burgeri
ENSMICG00000008386TRNAU1AP8962.338ENSEBUG00000009958-7862.338Eptatretus_burgeri
ENSMICG00000008386TRNAU1AP10099.652ENSEASG00005010062TRNAU1AP10099.652Equus_asinus_asinus
ENSMICG00000008386TRNAU1AP10099.652ENSECAG00000012980TRNAU1AP10099.652Equus_caballus
ENSMICG00000008386TRNAU1AP9663.066ENSELUG00000017686trnau1apa9462.718Esox_lucius
ENSMICG00000008386TRNAU1AP9670.526ENSELUG00000022790-9453.814Esox_lucius
ENSMICG00000008386TRNAU1AP10099.652ENSFCAG00000013401TRNAU1AP10099.652Felis_catus
ENSMICG00000008386TRNAU1AP10092.655ENSFALG00000001371TRNAU1AP10094.161Ficedula_albicollis
ENSMICG00000008386TRNAU1AP10098.955ENSFDAG00000018599TRNAU1AP10098.955Fukomys_damarensis
ENSMICG00000008386TRNAU1AP8764.103ENSFHEG00000018232trnau1apa8656.757Fundulus_heteroclitus
ENSMICG00000008386TRNAU1AP8763.014ENSGMOG00000016508trnau1apa9354.930Gadus_morhua
ENSMICG00000008386TRNAU1AP9947.692ENSGALG00000012721C2H6orf529544.788Gallus_gallus
ENSMICG00000008386TRNAU1AP10093.031ENSGALG00000001310-10093.031Gallus_gallus
ENSMICG00000008386TRNAU1AP8765.753ENSGAFG00000004928trnau1apa9059.244Gambusia_affinis
ENSMICG00000008386TRNAU1AP9860.274ENSGACG00000001443trnau1apa9559.932Gasterosteus_aculeatus
ENSMICG00000008386TRNAU1AP10094.350ENSGAGG00000004940TRNAU1AP10094.891Gopherus_agassizii
ENSMICG00000008386TRNAU1AP100100.000ENSGGOG00000003511TRNAU1AP100100.000Gorilla_gorilla
ENSMICG00000008386TRNAU1AP8769.863ENSHBUG00000002510trnau1apa9859.406Haplochromis_burtoni
ENSMICG00000008386TRNAU1AP10098.955ENSHGLG00000010380TRNAU1AP10098.955Heterocephalus_glaber_female
ENSMICG00000008386TRNAU1AP10098.870ENSHGLG00100012699TRNAU1AP10096.516Heterocephalus_glaber_male
ENSMICG00000008386TRNAU1AP9958.086ENSHCOG00000014770trnau1apa9766.429Hippocampus_comes
ENSMICG00000008386TRNAU1AP10099.652ENSSTOG00000000079TRNAU1AP10099.652Ictidomys_tridecemlineatus
ENSMICG00000008386TRNAU1AP10098.606ENSJJAG00000010128Trnau1ap10098.606Jaculus_jaculus
ENSMICG00000008386TRNAU1AP9560.208ENSKMAG00000001230trnau1apa9358.478Kryptolebias_marmoratus
ENSMICG00000008386TRNAU1AP9560.751ENSLBEG00000011683trnau1apa9359.864Labrus_bergylta
ENSMICG00000008386TRNAU1AP10077.966ENSLACG00000005541TRNAU1AP9972.632Latimeria_chalumnae
ENSMICG00000008386TRNAU1AP9972.028ENSLOCG00000004041trnau1apa9970.979Lepisosteus_oculatus
ENSMICG00000008386TRNAU1AP10099.435ENSLAFG00000007628TRNAU1AP10099.303Loxodonta_africana
ENSMICG00000008386TRNAU1AP100100.000ENSMFAG00000043751TRNAU1AP100100.000Macaca_fascicularis
ENSMICG00000008386TRNAU1AP10099.595ENSMMUG00000006561TRNAU1AP10099.595Macaca_mulatta
ENSMICG00000008386TRNAU1AP100100.000ENSMNEG00000044201TRNAU1AP100100.000Macaca_nemestrina
ENSMICG00000008386TRNAU1AP100100.000ENSMLEG00000015649TRNAU1AP100100.000Mandrillus_leucophaeus
ENSMICG00000008386TRNAU1AP9858.958ENSMAMG00000001247trnau1apa9858.824Mastacembelus_armatus
ENSMICG00000008386TRNAU1AP9859.000ENSMZEG00005017722trnau1apa9860.403Maylandia_zebra
ENSMICG00000008386TRNAU1AP10090.960ENSMGAG00000002105TRNAU1AP10092.806Meleagris_gallopavo
ENSMICG00000008386TRNAU1AP10099.303ENSMOCG00000011189Trnau1ap10099.303Microtus_ochrogaster
ENSMICG00000008386TRNAU1AP8768.493ENSMMOG00000012107trnau1apa9258.088Mola_mola
ENSMICG00000008386TRNAU1AP10095.819ENSMODG00000010927TRNAU1AP10095.819Monodelphis_domestica
ENSMICG00000008386TRNAU1AP9661.092ENSMALG00000016778trnau1apa9458.362Monopterus_albus
ENSMICG00000008386TRNAU1AP10098.785MGP_CAROLIEiJ_G0026563Trnau1ap100100.000Mus_caroli
ENSMICG00000008386TRNAU1AP10098.785ENSMUSG00000028898Trnau1ap100100.000Mus_musculus
ENSMICG00000008386TRNAU1AP10099.190MGP_PahariEiJ_G0028896Trnau1ap100100.000Mus_pahari
ENSMICG00000008386TRNAU1AP10099.190MGP_SPRETEiJ_G0027544Trnau1ap100100.000Mus_spretus
ENSMICG00000008386TRNAU1AP10098.955ENSMPUG00000015511TRNAU1AP10098.955Mustela_putorius_furo
ENSMICG00000008386TRNAU1AP100100.000ENSMLUG00000012586TRNAU1AP100100.000Myotis_lucifugus
ENSMICG00000008386TRNAU1AP10097.976ENSNGAG00000015881Trnau1ap10097.976Nannospalax_galili
ENSMICG00000008386TRNAU1AP9562.500ENSNBRG00000001758trnau1apa9856.997Neolamprologus_brichardi
ENSMICG00000008386TRNAU1AP100100.000ENSNLEG00000009822TRNAU1AP100100.000Nomascus_leucogenys
ENSMICG00000008386TRNAU1AP10093.220ENSMEUG00000006117TRNAU1AP10094.604Notamacropus_eugenii
ENSMICG00000008386TRNAU1AP8299.091ENSOPRG00000007084-6999.091Ochotona_princeps
ENSMICG00000008386TRNAU1AP10099.303ENSODEG00000002970TRNAU1AP10099.303Octodon_degus
ENSMICG00000008386TRNAU1AP7971.212ENSONIG00000004715trnau1apa9559.917Oreochromis_niloticus
ENSMICG00000008386TRNAU1AP8694.444ENSOANG00000005325-9974.476Ornithorhynchus_anatinus
ENSMICG00000008386TRNAU1AP10077.431ENSOCUG00000002353-10077.431Oryctolagus_cuniculus
ENSMICG00000008386TRNAU1AP9473.418ENSOCUG00000006834-10075.391Oryctolagus_cuniculus
ENSMICG00000008386TRNAU1AP10098.305ENSOCUG00000011704-10097.561Oryctolagus_cuniculus
ENSMICG00000008386TRNAU1AP9858.865ENSORLG00000010428trnau1apa9557.042Oryzias_latipes
ENSMICG00000008386TRNAU1AP9858.020ENSORLG00020000926trnau1ap9556.849Oryzias_latipes_hni
ENSMICG00000008386TRNAU1AP9858.020ENSORLG00015009858trnau1ap9556.849Oryzias_latipes_hsok
ENSMICG00000008386TRNAU1AP9859.044ENSOMEG00000007873trnau1apa9556.164Oryzias_melastigma
ENSMICG00000008386TRNAU1AP10099.652ENSOGAG00000002274TRNAU1AP10099.652Otolemur_garnettii
ENSMICG00000008386TRNAU1AP10098.955ENSOARG00000002843TRNAU1AP10098.955Ovis_aries
ENSMICG00000008386TRNAU1AP100100.000ENSPPAG00000033927TRNAU1AP100100.000Pan_paniscus
ENSMICG00000008386TRNAU1AP10099.652ENSPPRG00000004416TRNAU1AP10099.652Panthera_pardus
ENSMICG00000008386TRNAU1AP10099.652ENSPTIG00000016677TRNAU1AP10099.652Panthera_tigris_altaica
ENSMICG00000008386TRNAU1AP10073.889ENSPTRG00000000434-9779.336Pan_troglodytes
ENSMICG00000008386TRNAU1AP100100.000ENSPANG00000016019TRNAU1AP100100.000Papio_anubis
ENSMICG00000008386TRNAU1AP9474.468ENSPKIG00000022205-9377.528Paramormyrops_kingsleyae
ENSMICG00000008386TRNAU1AP8772.603ENSPKIG00000015511trnau1apa9257.951Paramormyrops_kingsleyae
ENSMICG00000008386TRNAU1AP10093.785ENSPSIG00000006864TRNAU1AP10094.891Pelodiscus_sinensis
ENSMICG00000008386TRNAU1AP9461.397ENSPMGG00000023893trnau1apa9160.517Periophthalmus_magnuspinnatus
ENSMICG00000008386TRNAU1AP10098.606ENSPEMG00000007877Trnau1ap10098.606Peromyscus_maniculatus_bairdii
ENSMICG00000008386TRNAU1AP9462.025ENSPMAG00000000592trnau1apa9760.227Petromyzon_marinus
ENSMICG00000008386TRNAU1AP8560.563ENSPMAG00000005934trnau1apa9660.185Petromyzon_marinus
ENSMICG00000008386TRNAU1AP8765.753ENSPFOG00000008100trnau1apa9357.639Poecilia_formosa
ENSMICG00000008386TRNAU1AP9156.679ENSPLAG00000010236trnau1apa9357.401Poecilia_latipinna
ENSMICG00000008386TRNAU1AP9655.862ENSPMEG00000016387trnau1apa9256.552Poecilia_mexicana
ENSMICG00000008386TRNAU1AP9353.903ENSPREG00000019821trnau1apa8664.286Poecilia_reticulata
ENSMICG00000008386TRNAU1AP10090.688ENSPPYG00000001639-10090.688Pongo_abelii
ENSMICG00000008386TRNAU1AP9895.868ENSPCOG00000023470-10095.868Propithecus_coquereli
ENSMICG00000008386TRNAU1AP100100.000ENSPCOG00000027712-100100.000Propithecus_coquereli
ENSMICG00000008386TRNAU1AP10099.652ENSPVAG00000017214TRNAU1AP10099.652Pteropus_vampyrus
ENSMICG00000008386TRNAU1AP9864.634ENSPNYG00000010130trnau1apa8177.778Pundamilia_nyererei
ENSMICG00000008386TRNAU1AP8769.863ENSPNAG00000024905trnau1apa9154.317Pygocentrus_nattereri
ENSMICG00000008386TRNAU1AP89100.000ENSRNOG00000055344Trnau1ap9290.775Rattus_norvegicus
ENSMICG00000008386TRNAU1AP100100.000ENSRBIG00000029083TRNAU1AP100100.000Rhinopithecus_bieti
ENSMICG00000008386TRNAU1AP100100.000ENSRROG00000029128TRNAU1AP100100.000Rhinopithecus_roxellana
ENSMICG00000008386TRNAU1AP100100.000ENSSBOG00000021299TRNAU1AP100100.000Saimiri_boliviensis_boliviensis
ENSMICG00000008386TRNAU1AP10095.122ENSSHAG00000008108TRNAU1AP10095.122Sarcophilus_harrisii
ENSMICG00000008386TRNAU1AP9853.722ENSSMAG00000020851trnau1apa9857.049Scophthalmus_maximus
ENSMICG00000008386TRNAU1AP8769.863ENSSDUG00000011734trnau1apa9457.483Seriola_dumerili
ENSMICG00000008386TRNAU1AP8769.863ENSSLDG00000012101trnau1apa9260.851Seriola_lalandi_dorsalis
ENSMICG00000008386TRNAU1AP10098.305ENSSARG00000007536TRNAU1AP10098.201Sorex_araneus
ENSMICG00000008386TRNAU1AP9986.014ENSSPUG00000010400-10086.014Sphenodon_punctatus
ENSMICG00000008386TRNAU1AP9981.818ENSSPUG00000010415-10081.818Sphenodon_punctatus
ENSMICG00000008386TRNAU1AP9857.980ENSSPAG00000005029trnau1apa9857.980Stegastes_partitus
ENSMICG00000008386TRNAU1AP10099.652ENSSSCG00000030284TRNAU1AP10099.652Sus_scrofa
ENSMICG00000008386TRNAU1AP10093.220ENSTGUG00000000735-10094.604Taeniopygia_guttata
ENSMICG00000008386TRNAU1AP9951.685ENSTGUG00000005908-10053.061Taeniopygia_guttata
ENSMICG00000008386TRNAU1AP9859.136ENSTRUG00000003352trnau1apa9858.472Takifugu_rubripes
ENSMICG00000008386TRNAU1AP9857.096ENSTNIG00000006129trnau1apa9857.096Tetraodon_nigroviridis
ENSMICG00000008386TRNAU1AP10093.220ENSTBEG00000008049-10087.755Tupaia_belangeri
ENSMICG00000008386TRNAU1AP100100.000ENSTTRG00000001854TRNAU1AP100100.000Tursiops_truncatus
ENSMICG00000008386TRNAU1AP10098.870ENSUAMG00000008789TRNAU1AP10099.270Ursus_americanus
ENSMICG00000008386TRNAU1AP10098.955ENSUMAG00000011068TRNAU1AP10098.955Ursus_maritimus
ENSMICG00000008386TRNAU1AP10099.435ENSVPAG00000006778TRNAU1AP10088.699Vicugna_pacos
ENSMICG00000008386TRNAU1AP10098.870ENSVVUG00000012518TRNAU1AP9397.535Vulpes_vulpes
ENSMICG00000008386TRNAU1AP8765.753ENSXMAG00000017361trnau1apa9357.639Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us