EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000008537 (Gene tree)
Gene ID: 105880220
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 5485 bases
Position: chr18:9822591-9828075
Accession: 105880220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000049672	RRM_1	PF00076.22	2.3e-32	1	2
ENSMICP00000049672	RRM_1	PF00076.22	2.3e-32	2	2
ENSMICP00000023766	RRM_1	PF00076.22	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000052235	SRSF6-202	408	-	ENSMICP00000023766	135 (aa)	-	UPI000002B37D
ENSMICT00000070838	SRSF6-201	3575	XM_012781054	ENSMICP00000049672	345 (aa)	XP_012636508	UPI000642F295

Gene Model

Click here to download ENSMICG00000008537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000008537	SRSF6	62	32.143	ENSMICG00000047975	-	58	32.143
ENSMICG00000008537	SRSF6	81	36.207	ENSMICG00000004674	-	88	36.207
ENSMICG00000008537	SRSF6	62	32.143	ENSMICG00000031929	RBM14	58	32.143
ENSMICG00000008537	SRSF6	52	71.429	ENSMICG00000046738	-	77	68.354
ENSMICG00000008537	SRSF6	50	71.642	ENSMICG00000037432	-	87	61.290
ENSMICG00000008537	SRSF6	57	40.191	ENSMICG00000013639	-	77	50.000
ENSMICG00000008537	SRSF6	51	47.297	ENSMICG00000008674	SRSF9	71	40.571
ENSMICG00000008537	SRSF6	62	33.333	ENSMICG00000003817	-	59	33.333
ENSMICG00000008537	SRSF6	59	30.435	ENSMICG00000028982	-	77	30.435
ENSMICG00000008537	SRSF6	56	46.835	ENSMICG00000029154	-	64	46.835
ENSMICG00000008537	SRSF6	62	32.143	ENSMICG00000003820	RBM4B	58	32.143
ENSMICG00000008537	SRSF6	53	32.877	ENSMICG00000005558	RALYL	64	34.921
ENSMICG00000008537	SRSF6	50	30.263	ENSMICG00000047440	-	57	30.000
ENSMICG00000008537	SRSF6	56	44.304	ENSMICG00000037691	-	57	43.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000008537	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSMICG00000008537	SRSF6	58	93.590	ENSAPOG00000016635	-	84	82.353	Acanthochromis_polyacanthus
ENSMICG00000008537	SRSF6	94	86.420	ENSAMEG00000003710	SRSF6	94	86.154	Ailuropoda_melanoleuca
ENSMICG00000008537	SRSF6	63	87.059	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSMICG00000008537	SRSF6	86	71.380	ENSACIG00000023658	-	56	87.222	Amphilophus_citrinellus
ENSMICG00000008537	SRSF6	65	82.955	ENSAOCG00000004309	-	57	82.609	Amphiprion_ocellaris
ENSMICG00000008537	SRSF6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSMICG00000008537	SRSF6	63	84.706	ENSAPEG00000020746	-	66	79.255	Amphiprion_percula
ENSMICG00000008537	SRSF6	98	61.871	ENSAPEG00000013086	-	53	87.634	Amphiprion_percula
ENSMICG00000008537	SRSF6	66	83.146	ENSATEG00000007255	-	71	79.459	Anabas_testudineus
ENSMICG00000008537	SRSF6	94	80.308	ENSACAG00000002061	SRSF6	93	82.769	Anolis_carolinensis
ENSMICG00000008537	SRSF6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSMICG00000008537	SRSF6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSMICG00000008537	SRSF6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSMICG00000008537	SRSF6	55	93.243	ENSAMXG00000003101	-	51	85.263	Astyanax_mexicanus
ENSMICG00000008537	SRSF6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSMICG00000008537	SRSF6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSMICG00000008537	SRSF6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSMICG00000008537	SRSF6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSMICG00000008537	SRSF6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSMICG00000008537	SRSF6	100	97.110	ENSCHIG00000009148	-	100	97.110	Capra_hircus
ENSMICG00000008537	SRSF6	100	82.948	ENSTSYG00000026476	SRSF6	100	82.948	Carlito_syrichta
ENSMICG00000008537	SRSF6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSMICG00000008537	SRSF6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSMICG00000008537	SRSF6	94	65.951	ENSCCAG00000018540	-	62	87.234	Cebus_capucinus
ENSMICG00000008537	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSMICG00000008537	SRSF6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSMICG00000008537	SRSF6	100	97.399	ENSCSAG00000014022	SRSF6	100	97.399	Chlorocebus_sabaeus
ENSMICG00000008537	SRSF6	78	100.000	ENSCHOG00000000561	SRSF6	77	100.000	Choloepus_hoffmanni
ENSMICG00000008537	SRSF6	58	97.436	ENSCPBG00000018200	SRSF6	94	84.709	Chrysemys_picta_bellii
ENSMICG00000008537	SRSF6	100	82.948	ENSCANG00000042529	-	100	82.948	Colobus_angolensis_palliatus
ENSMICG00000008537	SRSF6	100	97.110	ENSCANG00000037774	-	100	97.110	Colobus_angolensis_palliatus
ENSMICG00000008537	SRSF6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSMICG00000008537	SRSF6	56	93.814	ENSCGRG00000006618	Srsf6	92	93.878	Cricetulus_griseus_crigri
ENSMICG00000008537	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSMICG00000008537	SRSF6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSMICG00000008537	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSMICG00000008537	SRSF6	94	95.370	ENSDNOG00000008410	SRSF6	94	95.370	Dasypus_novemcinctus
ENSMICG00000008537	SRSF6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSMICG00000008537	SRSF6	92	92.812	ENSETEG00000006221	SRSF6	94	90.154	Echinops_telfairi
ENSMICG00000008537	SRSF6	100	96.821	ENSEASG00005023429	SRSF6	100	96.821	Equus_asinus_asinus
ENSMICG00000008537	SRSF6	100	96.821	ENSECAG00000023932	SRSF6	100	96.821	Equus_caballus
ENSMICG00000008537	SRSF6	56	93.333	ENSEEUG00000002324	SRSF6	90	92.929	Erinaceus_europaeus
ENSMICG00000008537	SRSF6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSMICG00000008537	SRSF6	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSMICG00000008537	SRSF6	100	97.971	ENSFCAG00000032814	SRSF6	100	97.971	Felis_catus
ENSMICG00000008537	SRSF6	94	80.556	ENSFDAG00000012191	SRSF6	94	77.538	Fukomys_damarensis
ENSMICG00000008537	SRSF6	87	70.297	ENSFHEG00000023065	srsf6a	55	86.957	Fundulus_heteroclitus
ENSMICG00000008537	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.125	Gadus_morhua
ENSMICG00000008537	SRSF6	61	76.829	ENSGMOG00000006105	srsf6a	62	69.832	Gadus_morhua
ENSMICG00000008537	SRSF6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSMICG00000008537	SRSF6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSMICG00000008537	SRSF6	98	61.194	ENSGACG00000006084	srsf6a	53	83.333	Gasterosteus_aculeatus
ENSMICG00000008537	SRSF6	58	97.436	ENSGAGG00000003238	SRSF6	94	84.709	Gopherus_agassizii
ENSMICG00000008537	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSMICG00000008537	SRSF6	100	58.261	ENSHBUG00000006386	-	58	83.152	Haplochromis_burtoni
ENSMICG00000008537	SRSF6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSMICG00000008537	SRSF6	90	75.884	ENSHGLG00000007701	-	58	78.610	Heterocephalus_glaber_female
ENSMICG00000008537	SRSF6	94	80.864	ENSHGLG00100005043	SRSF6	94	77.846	Heterocephalus_glaber_male
ENSMICG00000008537	SRSF6	58	89.744	ENSHCOG00000002740	srsf6a	57	82.609	Hippocampus_comes
ENSMICG00000008537	SRSF6	58	92.308	ENSIPUG00000004776	-	76	67.623	Ictalurus_punctatus
ENSMICG00000008537	SRSF6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSMICG00000008537	SRSF6	96	59.940	ENSKMAG00000011934	srsf6a	59	85.326	Kryptolebias_marmoratus
ENSMICG00000008537	SRSF6	58	92.308	ENSLBEG00000007356	srsf6a	52	84.946	Labrus_bergylta
ENSMICG00000008537	SRSF6	89	81.350	ENSLACG00000005466	SRSF6	54	91.304	Latimeria_chalumnae
ENSMICG00000008537	SRSF6	69	95.816	ENSLAFG00000006682	SRSF6	89	95.652	Loxodonta_africana
ENSMICG00000008537	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSMICG00000008537	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSMICG00000008537	SRSF6	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSMICG00000008537	SRSF6	100	95.954	ENSMNEG00000038270	-	100	95.954	Macaca_nemestrina
ENSMICG00000008537	SRSF6	63	95.853	ENSMLEG00000031524	SRSF6	100	95.853	Mandrillus_leucophaeus
ENSMICG00000008537	SRSF6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSMICG00000008537	SRSF6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.097	Mastacembelus_armatus
ENSMICG00000008537	SRSF6	96	60.606	ENSMZEG00005008032	-	57	83.152	Maylandia_zebra
ENSMICG00000008537	SRSF6	98	58.333	ENSMZEG00005020658	-	60	82.320	Maylandia_zebra
ENSMICG00000008537	SRSF6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSMICG00000008537	SRSF6	56	93.814	ENSMOCG00000018738	Srsf6	92	93.878	Microtus_ochrogaster
ENSMICG00000008537	SRSF6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSMICG00000008537	SRSF6	58	97.436	ENSMODG00000003107	SRSF6	55	96.277	Monodelphis_domestica
ENSMICG00000008537	SRSF6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSMICG00000008537	SRSF6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSMICG00000008537	SRSF6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSMICG00000008537	SRSF6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSMICG00000008537	SRSF6	83	98.258	ENSMPUG00000017692	SRSF6	99	98.258	Mustela_putorius_furo
ENSMICG00000008537	SRSF6	93	80.745	ENSMLUG00000016618	SRSF6	94	80.615	Myotis_lucifugus
ENSMICG00000008537	SRSF6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSMICG00000008537	SRSF6	56	89.474	ENSNBRG00000014709	-	58	83.152	Neolamprologus_brichardi
ENSMICG00000008537	SRSF6	58	93.590	ENSNBRG00000001846	-	52	87.097	Neolamprologus_brichardi
ENSMICG00000008537	SRSF6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSMICG00000008537	SRSF6	58	97.436	ENSMEUG00000014615	SRSF6	62	96.277	Notamacropus_eugenii
ENSMICG00000008537	SRSF6	75	96.923	ENSOPRG00000002017	-	100	96.923	Ochotona_princeps
ENSMICG00000008537	SRSF6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSMICG00000008537	SRSF6	61	86.585	ENSONIG00000020247	-	53	83.696	Oreochromis_niloticus
ENSMICG00000008537	SRSF6	98	40.541	ENSOCUG00000009785	-	64	76.804	Oryctolagus_cuniculus
ENSMICG00000008537	SRSF6	74	57.874	ENSOCUG00000023999	-	70	63.128	Oryctolagus_cuniculus
ENSMICG00000008537	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSMICG00000008537	SRSF6	100	97.681	ENSOGAG00000014468	SRSF6	100	97.681	Otolemur_garnettii
ENSMICG00000008537	SRSF6	93	93.789	ENSOARG00000003117	SRSF6	94	93.538	Ovis_aries
ENSMICG00000008537	SRSF6	100	97.688	ENSPPAG00000034327	-	100	97.688	Pan_paniscus
ENSMICG00000008537	SRSF6	90	83.923	ENSPPAG00000043131	-	100	85.852	Pan_paniscus
ENSMICG00000008537	SRSF6	100	97.971	ENSPPRG00000008917	SRSF6	100	97.971	Panthera_pardus
ENSMICG00000008537	SRSF6	63	97.685	ENSPTIG00000019153	SRSF6	100	97.685	Panthera_tigris_altaica
ENSMICG00000008537	SRSF6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSMICG00000008537	SRSF6	90	83.923	ENSPTRG00000046274	-	100	85.852	Pan_troglodytes
ENSMICG00000008537	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSMICG00000008537	SRSF6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSMICG00000008537	SRSF6	100	63.248	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSMICG00000008537	SRSF6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSMICG00000008537	SRSF6	88	71.845	ENSPMGG00000014963	srsf6a	55	88.587	Periophthalmus_magnuspinnatus
ENSMICG00000008537	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSMICG00000008537	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSMICG00000008537	SRSF6	58	92.308	ENSPFOG00000006437	srsf6a	50	82.632	Poecilia_formosa
ENSMICG00000008537	SRSF6	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSMICG00000008537	SRSF6	58	92.308	ENSPMEG00000006042	SRSF6	54	86.486	Poecilia_mexicana
ENSMICG00000008537	SRSF6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSMICG00000008537	SRSF6	100	97.977	ENSPPYG00000011019	SRSF6	100	97.977	Pongo_abelii
ENSMICG00000008537	SRSF6	92	94.340	ENSPCAG00000010954	SRSF6	96	92.593	Procavia_capensis
ENSMICG00000008537	SRSF6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSMICG00000008537	SRSF6	94	95.062	ENSPVAG00000015232	SRSF6	94	94.462	Pteropus_vampyrus
ENSMICG00000008537	SRSF6	58	93.590	ENSPNYG00000011272	-	51	87.097	Pundamilia_nyererei
ENSMICG00000008537	SRSF6	56	89.474	ENSPNYG00000004944	-	58	83.152	Pundamilia_nyererei
ENSMICG00000008537	SRSF6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSMICG00000008537	SRSF6	94	95.046	ENSRNOG00000006380	Srsf6	95	95.077	Rattus_norvegicus
ENSMICG00000008537	SRSF6	100	96.296	ENSRBIG00000041414	SRSF6	100	96.296	Rhinopithecus_bieti
ENSMICG00000008537	SRSF6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSMICG00000008537	SRSF6	93	70.093	ENSSBOG00000034078	-	54	76.796	Saimiri_boliviensis_boliviensis
ENSMICG00000008537	SRSF6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSMICG00000008537	SRSF6	58	97.436	ENSSHAG00000012805	SRSF6	55	96.277	Sarcophilus_harrisii
ENSMICG00000008537	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	60	88.587	Scleropages_formosus
ENSMICG00000008537	SRSF6	88	63.988	ENSSFOG00015019681	-	53	81.443	Scleropages_formosus
ENSMICG00000008537	SRSF6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSMICG00000008537	SRSF6	56	88.158	ENSSMAG00000017447	-	55	79.348	Scophthalmus_maximus
ENSMICG00000008537	SRSF6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSMICG00000008537	SRSF6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.097	Seriola_dumerili
ENSMICG00000008537	SRSF6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSMICG00000008537	SRSF6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.097	Seriola_lalandi_dorsalis
ENSMICG00000008537	SRSF6	75	96.525	ENSSARG00000001602	SRSF6	100	96.525	Sorex_araneus
ENSMICG00000008537	SRSF6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSMICG00000008537	SRSF6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSMICG00000008537	SRSF6	98	61.871	ENSSPAG00000002362	srsf6a	67	85.185	Stegastes_partitus
ENSMICG00000008537	SRSF6	100	96.821	ENSSSCG00000007362	SRSF6	100	96.821	Sus_scrofa
ENSMICG00000008537	SRSF6	92	84.259	ENSTGUG00000003455	SRSF6	94	79.878	Taeniopygia_guttata
ENSMICG00000008537	SRSF6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSMICG00000008537	SRSF6	87	70.530	ENSTNIG00000001692	srsf6a	57	85.484	Tetraodon_nigroviridis
ENSMICG00000008537	SRSF6	84	93.493	ENSTBEG00000013448	SRSF6	93	93.151	Tupaia_belangeri
ENSMICG00000008537	SRSF6	75	96.154	ENSTTRG00000015410	SRSF6	100	96.154	Tursiops_truncatus
ENSMICG00000008537	SRSF6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSMICG00000008537	SRSF6	63	97.685	ENSUMAG00000001154	SRSF6	100	97.685	Ursus_maritimus
ENSMICG00000008537	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSMICG00000008537	SRSF6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSMICG00000008537	SRSF6	58	92.308	ENSXMAG00000021849	srsf6a	55	85.870	Xiphophorus_maculatus