EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000008643 (Gene tree)
Gene ID: 105862381
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 28235 bases
Position: chr2:97011247-97039481
Accession: 105862381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000007873	RTC	PF01137.21	1.3e-63	1	1
ENSMICP00000007873	RTC_insert	PF05189.13	6.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000008644	RTCA-201	1625	XM_012748643	ENSMICP00000007873	309 (aa)	XP_012604097	UPI00064339E7

Gene Model

Click here to download ENSMICG00000008643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000008643	RTCA	100	96.117	ENSG00000137996	RTCA	84	96.117	Homo_sapiens
ENSMICG00000008643	RTCA	100	72.168	ENSAPOG00000001345	rtca	84	72.168	Acanthochromis_polyacanthus
ENSMICG00000008643	RTCA	87	95.539	ENSAMEG00000008855	RTCA	100	95.539	Ailuropoda_melanoleuca
ENSMICG00000008643	RTCA	100	72.492	ENSACIG00000019643	rtca	84	72.492	Amphilophus_citrinellus
ENSMICG00000008643	RTCA	100	71.521	ENSAOCG00000014979	rtca	84	71.521	Amphiprion_ocellaris
ENSMICG00000008643	RTCA	100	71.521	ENSAPEG00000006945	rtca	84	71.521	Amphiprion_percula
ENSMICG00000008643	RTCA	100	71.845	ENSATEG00000006315	rtca	85	71.845	Anabas_testudineus
ENSMICG00000008643	RTCA	100	81.877	ENSAPLG00000015430	RTCA	87	81.877	Anas_platyrhynchos
ENSMICG00000008643	RTCA	100	95.469	ENSANAG00000025446	RTCA	84	95.469	Aotus_nancymaae
ENSMICG00000008643	RTCA	100	71.197	ENSACLG00000020770	rtca	84	71.197	Astatotilapia_calliptera
ENSMICG00000008643	RTCA	100	73.786	ENSAMXG00000043271	rtca	84	73.786	Astyanax_mexicanus
ENSMICG00000008643	RTCA	100	96.117	ENSBTAG00000006321	RTCA	84	96.117	Bos_taurus
ENSMICG00000008643	RTCA	100	95.469	ENSCJAG00000003398	RTCA	84	95.469	Callithrix_jacchus
ENSMICG00000008643	RTCA	100	96.117	ENSCAFG00000020010	RTCA	57	96.117	Canis_familiaris
ENSMICG00000008643	RTCA	100	95.793	ENSCHIG00000018937	RTCA	84	95.793	Capra_hircus
ENSMICG00000008643	RTCA	100	94.175	ENSTSYG00000011305	RTCA	84	94.175	Carlito_syrichta
ENSMICG00000008643	RTCA	100	95.793	ENSCCAG00000021844	RTCA	84	95.793	Cebus_capucinus
ENSMICG00000008643	RTCA	100	96.117	ENSCATG00000019364	RTCA	100	96.117	Cercocebus_atys
ENSMICG00000008643	RTCA	100	96.117	ENSCLAG00000006125	RTCA	97	96.117	Chinchilla_lanigera
ENSMICG00000008643	RTCA	100	96.440	ENSCSAG00000001509	RTCA	84	96.440	Chlorocebus_sabaeus
ENSMICG00000008643	RTCA	100	94.822	ENSCHOG00000005211	RTCA	84	94.822	Choloepus_hoffmanni
ENSMICG00000008643	RTCA	100	83.819	ENSCPBG00000026658	RTCA	84	83.819	Chrysemys_picta_bellii
ENSMICG00000008643	RTCA	100	54.693	ENSCING00000007875	-	84	54.693	Ciona_intestinalis
ENSMICG00000008643	RTCA	100	53.398	ENSCSAVG00000007269	-	84	53.398	Ciona_savignyi
ENSMICG00000008643	RTCA	100	96.117	ENSCANG00000040106	RTCA	84	96.117	Colobus_angolensis_palliatus
ENSMICG00000008643	RTCA	87	92.565	ENSCGRG00001013163	Rtca	85	92.565	Cricetulus_griseus_chok1gshd
ENSMICG00000008643	RTCA	100	70.227	ENSCSEG00000000530	rtca	82	70.227	Cynoglossus_semilaevis
ENSMICG00000008643	RTCA	74	76.316	ENSCVAG00000021809	rtca	66	76.316	Cyprinodon_variegatus
ENSMICG00000008643	RTCA	100	74.434	ENSDARG00000002215	rtca	84	74.434	Danio_rerio
ENSMICG00000008643	RTCA	100	95.469	ENSDNOG00000000456	RTCA	84	95.469	Dasypus_novemcinctus
ENSMICG00000008643	RTCA	100	93.204	ENSDORG00000005448	Rtca	84	93.204	Dipodomys_ordii
ENSMICG00000008643	RTCA	99	34.967	FBgn0025630	Rtca	83	34.967	Drosophila_melanogaster
ENSMICG00000008643	RTCA	94	53.584	ENSEBUG00000008556	rtca	78	53.584	Eptatretus_burgeri
ENSMICG00000008643	RTCA	100	95.793	ENSEASG00005015926	RTCA	84	95.793	Equus_asinus_asinus
ENSMICG00000008643	RTCA	100	95.793	ENSECAG00000019831	RTCA	84	95.793	Equus_caballus
ENSMICG00000008643	RTCA	89	85.507	ENSEEUG00000001165	RTCA	80	85.507	Erinaceus_europaeus
ENSMICG00000008643	RTCA	100	71.521	ENSELUG00000003741	rtca	85	71.521	Esox_lucius
ENSMICG00000008643	RTCA	100	96.117	ENSFCAG00000024460	RTCA	84	96.117	Felis_catus
ENSMICG00000008643	RTCA	92	81.625	ENSFALG00000002443	RTCA	76	81.625	Ficedula_albicollis
ENSMICG00000008643	RTCA	100	96.117	ENSFDAG00000012070	-	84	96.117	Fukomys_damarensis
ENSMICG00000008643	RTCA	98	73.443	ENSFDAG00000016084	-	83	73.443	Fukomys_damarensis
ENSMICG00000008643	RTCA	70	70.698	ENSFHEG00000002868	rtca	96	68.584	Fundulus_heteroclitus
ENSMICG00000008643	RTCA	100	70.227	ENSGMOG00000013264	rtca	84	70.227	Gadus_morhua
ENSMICG00000008643	RTCA	100	82.201	ENSGALG00000005277	RTCA	84	82.201	Gallus_gallus
ENSMICG00000008643	RTCA	100	72.492	ENSGAFG00000011853	rtca	84	72.492	Gambusia_affinis
ENSMICG00000008643	RTCA	100	69.579	ENSGACG00000013497	rtca	84	69.579	Gasterosteus_aculeatus
ENSMICG00000008643	RTCA	76	83.898	ENSGAGG00000023306	RTCA	81	83.898	Gopherus_agassizii
ENSMICG00000008643	RTCA	100	95.469	ENSGGOG00000044018	-	84	95.469	Gorilla_gorilla
ENSMICG00000008643	RTCA	100	96.117	ENSGGOG00000009546	-	100	96.117	Gorilla_gorilla
ENSMICG00000008643	RTCA	100	70.874	ENSHBUG00000002114	rtca	84	70.874	Haplochromis_burtoni
ENSMICG00000008643	RTCA	100	94.822	ENSHGLG00000002617	RTCA	84	94.822	Heterocephalus_glaber_female
ENSMICG00000008643	RTCA	100	94.822	ENSHGLG00100006056	RTCA	84	94.822	Heterocephalus_glaber_male
ENSMICG00000008643	RTCA	100	63.430	ENSHCOG00000020628	rtca	75	63.430	Hippocampus_comes
ENSMICG00000008643	RTCA	100	73.786	ENSIPUG00000024803	rtca	84	73.786	Ictalurus_punctatus
ENSMICG00000008643	RTCA	100	85.761	ENSSTOG00000033099	-	83	85.761	Ictidomys_tridecemlineatus
ENSMICG00000008643	RTCA	100	96.117	ENSSTOG00000013528	-	91	96.117	Ictidomys_tridecemlineatus
ENSMICG00000008643	RTCA	100	62.460	ENSJJAG00000016178	Rtca	81	62.460	Jaculus_jaculus
ENSMICG00000008643	RTCA	100	72.816	ENSKMAG00000006651	rtca	84	72.816	Kryptolebias_marmoratus
ENSMICG00000008643	RTCA	100	69.256	ENSLBEG00000002448	-	96	69.256	Labrus_bergylta
ENSMICG00000008643	RTCA	100	69.256	ENSLBEG00000028971	rtca	85	69.256	Labrus_bergylta
ENSMICG00000008643	RTCA	100	77.994	ENSLACG00000013666	RTCA	84	77.994	Latimeria_chalumnae
ENSMICG00000008643	RTCA	100	72.492	ENSLOCG00000000093	rtca	84	72.492	Lepisosteus_oculatus
ENSMICG00000008643	RTCA	100	94.498	ENSLAFG00000001473	RTCA	84	94.498	Loxodonta_africana
ENSMICG00000008643	RTCA	100	96.440	ENSMFAG00000034132	RTCA	84	96.440	Macaca_fascicularis
ENSMICG00000008643	RTCA	100	95.793	ENSMMUG00000019105	RTCA	84	95.793	Macaca_mulatta
ENSMICG00000008643	RTCA	100	96.440	ENSMNEG00000037163	RTCA	100	96.440	Macaca_nemestrina
ENSMICG00000008643	RTCA	87	84.074	ENSMLEG00000042151	RTCA	79	84.074	Mandrillus_leucophaeus
ENSMICG00000008643	RTCA	100	73.786	ENSMAMG00000016536	rtca	84	73.786	Mastacembelus_armatus
ENSMICG00000008643	RTCA	100	71.197	ENSMZEG00005017945	rtca	84	71.197	Maylandia_zebra
ENSMICG00000008643	RTCA	100	80.906	ENSMGAG00000006892	RTCA	97	80.906	Meleagris_gallopavo
ENSMICG00000008643	RTCA	100	92.233	ENSMAUG00000008488	Rtca	84	92.233	Mesocricetus_auratus
ENSMICG00000008643	RTCA	100	92.880	ENSMOCG00000016660	Rtca	84	92.880	Microtus_ochrogaster
ENSMICG00000008643	RTCA	100	72.492	ENSMMOG00000007750	rtca	100	72.492	Mola_mola
ENSMICG00000008643	RTCA	100	90.615	ENSMODG00000003557	RTCA	84	90.615	Monodelphis_domestica
ENSMICG00000008643	RTCA	100	73.463	ENSMALG00000020844	rtca	84	73.463	Monopterus_albus
ENSMICG00000008643	RTCA	100	91.909	MGP_CAROLIEiJ_G0025565	Rtca	100	90.845	Mus_caroli
ENSMICG00000008643	RTCA	100	91.262	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSMICG00000008643	RTCA	100	91.586	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSMICG00000008643	RTCA	100	91.586	MGP_SPRETEiJ_G0026515	Rtca	100	90.141	Mus_spretus
ENSMICG00000008643	RTCA	100	96.764	ENSMPUG00000012119	RTCA	84	96.764	Mustela_putorius_furo
ENSMICG00000008643	RTCA	100	89.644	ENSMLUG00000009922	RTCA	84	89.644	Myotis_lucifugus
ENSMICG00000008643	RTCA	100	92.557	ENSNGAG00000011540	Rtca	90	92.557	Nannospalax_galili
ENSMICG00000008643	RTCA	100	71.197	ENSNBRG00000003062	rtca	84	71.197	Neolamprologus_brichardi
ENSMICG00000008643	RTCA	100	96.117	ENSNLEG00000031426	RTCA	84	96.117	Nomascus_leucogenys
ENSMICG00000008643	RTCA	50	95.122	ENSMEUG00000010030	-	59	78.788	Notamacropus_eugenii
ENSMICG00000008643	RTCA	87	89.219	ENSOPRG00000012092	RTCA	71	89.219	Ochotona_princeps
ENSMICG00000008643	RTCA	100	95.469	ENSODEG00000006990	RTCA	85	95.469	Octodon_degus
ENSMICG00000008643	RTCA	100	71.197	ENSONIG00000007753	rtca	84	71.197	Oreochromis_niloticus
ENSMICG00000008643	RTCA	100	87.702	ENSOANG00000012055	RTCA	95	87.702	Ornithorhynchus_anatinus
ENSMICG00000008643	RTCA	100	96.764	ENSOCUG00000014247	RTCA	84	96.764	Oryctolagus_cuniculus
ENSMICG00000008643	RTCA	100	71.197	ENSORLG00000013605	rtca	84	71.197	Oryzias_latipes
ENSMICG00000008643	RTCA	100	71.197	ENSORLG00020001904	rtca	84	71.197	Oryzias_latipes_hni
ENSMICG00000008643	RTCA	100	71.197	ENSORLG00015021064	rtca	84	71.197	Oryzias_latipes_hsok
ENSMICG00000008643	RTCA	100	72.492	ENSOMEG00000000756	rtca	84	72.492	Oryzias_melastigma
ENSMICG00000008643	RTCA	99	88.312	ENSOGAG00000005627	RTCA	84	88.312	Otolemur_garnettii
ENSMICG00000008643	RTCA	100	95.146	ENSOARG00000018122	RTCA	97	95.146	Ovis_aries
ENSMICG00000008643	RTCA	100	95.793	ENSPPAG00000035119	RTCA	100	95.793	Pan_paniscus
ENSMICG00000008643	RTCA	100	95.793	ENSPPRG00000000350	RTCA	84	95.793	Panthera_pardus
ENSMICG00000008643	RTCA	100	95.793	ENSPTIG00000012816	RTCA	84	95.793	Panthera_tigris_altaica
ENSMICG00000008643	RTCA	100	95.793	ENSPTRG00000001004	RTCA	100	95.793	Pan_troglodytes
ENSMICG00000008643	RTCA	100	96.440	ENSPANG00000000346	RTCA	84	96.440	Papio_anubis
ENSMICG00000008643	RTCA	100	75.081	ENSPKIG00000001653	rtca	84	75.081	Paramormyrops_kingsleyae
ENSMICG00000008643	RTCA	100	84.466	ENSPSIG00000011408	RTCA	84	84.466	Pelodiscus_sinensis
ENSMICG00000008643	RTCA	100	91.909	ENSPEMG00000018582	Rtca	84	91.909	Peromyscus_maniculatus_bairdii
ENSMICG00000008643	RTCA	99	57.282	ENSPMAG00000009110	rtca	84	57.282	Petromyzon_marinus
ENSMICG00000008643	RTCA	100	90.291	ENSPCIG00000007684	RTCA	84	90.291	Phascolarctos_cinereus
ENSMICG00000008643	RTCA	100	73.463	ENSPFOG00000004824	rtca	84	73.463	Poecilia_formosa
ENSMICG00000008643	RTCA	100	73.463	ENSPLAG00000011753	rtca	84	73.463	Poecilia_latipinna
ENSMICG00000008643	RTCA	100	73.463	ENSPMEG00000020469	rtca	84	73.463	Poecilia_mexicana
ENSMICG00000008643	RTCA	100	74.110	ENSPREG00000001365	rtca	84	74.110	Poecilia_reticulata
ENSMICG00000008643	RTCA	100	96.117	ENSPPYG00000001115	RTCA	84	96.117	Pongo_abelii
ENSMICG00000008643	RTCA	100	91.262	ENSPCAG00000005076	RTCA	84	91.262	Procavia_capensis
ENSMICG00000008643	RTCA	100	99.029	ENSPCOG00000005603	RTCA	84	99.029	Propithecus_coquereli
ENSMICG00000008643	RTCA	100	94.498	ENSPVAG00000009478	RTCA	81	94.498	Pteropus_vampyrus
ENSMICG00000008643	RTCA	100	71.197	ENSPNYG00000004722	rtca	84	71.197	Pundamilia_nyererei
ENSMICG00000008643	RTCA	100	74.434	ENSPNAG00000022270	rtca	84	74.434	Pygocentrus_nattereri
ENSMICG00000008643	RTCA	100	91.909	ENSRNOG00000014575	Rtca	84	91.909	Rattus_norvegicus
ENSMICG00000008643	RTCA	100	95.469	ENSRBIG00000041180	RTCA	100	95.469	Rhinopithecus_bieti
ENSMICG00000008643	RTCA	100	95.469	ENSRROG00000024929	RTCA	84	95.469	Rhinopithecus_roxellana
ENSMICG00000008643	RTCA	100	95.146	ENSSBOG00000028626	RTCA	84	95.146	Saimiri_boliviensis_boliviensis
ENSMICG00000008643	RTCA	100	91.262	ENSSHAG00000001758	RTCA	84	91.262	Sarcophilus_harrisii
ENSMICG00000008643	RTCA	100	69.903	ENSSMAG00000014680	rtca	83	69.903	Scophthalmus_maximus
ENSMICG00000008643	RTCA	100	71.845	ENSSDUG00000015585	rtca	83	71.845	Seriola_dumerili
ENSMICG00000008643	RTCA	100	71.521	ENSSLDG00000018985	rtca	83	71.521	Seriola_lalandi_dorsalis
ENSMICG00000008643	RTCA	100	87.055	ENSSARG00000013993	RTCA	97	87.055	Sorex_araneus
ENSMICG00000008643	RTCA	51	80.255	ENSSPUG00000016255	-	100	80.255	Sphenodon_punctatus
ENSMICG00000008643	RTCA	100	71.197	ENSSPAG00000011938	rtca	84	71.197	Stegastes_partitus
ENSMICG00000008643	RTCA	100	95.793	ENSSSCG00000006865	RTCA	84	95.793	Sus_scrofa
ENSMICG00000008643	RTCA	100	83.172	ENSTGUG00000005154	RTCA	84	83.172	Taeniopygia_guttata
ENSMICG00000008643	RTCA	100	71.845	ENSTRUG00000008799	rtca	84	71.845	Takifugu_rubripes
ENSMICG00000008643	RTCA	100	72.168	ENSTNIG00000004725	rtca	84	72.168	Tetraodon_nigroviridis
ENSMICG00000008643	RTCA	51	100.000	ENSTBEG00000000943	RTCA	63	68.908	Tupaia_belangeri
ENSMICG00000008643	RTCA	100	94.822	ENSTTRG00000015327	RTCA	82	94.822	Tursiops_truncatus
ENSMICG00000008643	RTCA	93	93.007	ENSUAMG00000017265	RTCA	80	93.007	Ursus_americanus
ENSMICG00000008643	RTCA	100	95.469	ENSUMAG00000007881	RTCA	84	95.469	Ursus_maritimus
ENSMICG00000008643	RTCA	100	86.084	ENSVPAG00000001039	RTCA	82	86.084	Vicugna_pacos
ENSMICG00000008643	RTCA	100	95.793	ENSVVUG00000022041	RTCA	57	95.793	Vulpes_vulpes
ENSMICG00000008643	RTCA	99	63.666	ENSXETG00000031661	RTCA	84	63.666	Xenopus_tropicalis
ENSMICG00000008643	RTCA	100	61.812	ENSXCOG00000008002	rtca	83	61.812	Xiphophorus_couchianus
ENSMICG00000008643	RTCA	100	72.816	ENSXMAG00000005482	rtca	84	72.816	Xiphophorus_maculatus