EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000008739 (Gene tree)
Gene ID: 105869639
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 95806 bases
Position: chr24:13755758-13851563
Accession: 105869639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000021474	RRM_5	PF13893.6	9.8e-07	1	1
ENSMICP00000007968	RRM_5	PF13893.6	1.1e-06	1	1
ENSMICP00000021474	RRM_1	PF00076.22	4.3e-13	1	1
ENSMICP00000007968	RRM_1	PF00076.22	4.4e-13	1	1
ENSMICP00000021474	SAP	PF02037.27	1e-10	1	1
ENSMICP00000007968	SAP	PF02037.27	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000050742	-	2532	-	ENSMICP00000021474	843 (aa)	-	UPI000C2EBCD2
ENSMICT00000008749	-	2739	XM_012761601	ENSMICP00000007968	912 (aa)	XP_012617055	UPI000C2ED7F8

Gene Model

Click here to download ENSMICG00000008739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000008739	-	85	85.825	ENSMICG00000046795	-	98	94.681
ENSMICG00000008739	-	100	68.776	ENSMICG00000008711	SAFB2	96	69.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000008739	-	100	91.519	ENSG00000160633	SAFB	100	92.344	Homo_sapiens
ENSMICG00000008739	-	91	44.713	ENSAPOG00000022508	safb	65	44.041	Acanthochromis_polyacanthus
ENSMICG00000008739	-	100	89.034	ENSAMEG00000012254	SAFB	100	88.165	Ailuropoda_melanoleuca
ENSMICG00000008739	-	94	41.090	ENSACIG00000006247	safb	72	43.366	Amphilophus_citrinellus
ENSMICG00000008739	-	92	45.103	ENSAOCG00000006308	safb	71	43.631	Amphiprion_ocellaris
ENSMICG00000008739	-	91	44.317	ENSAPEG00000023342	safb	66	43.322	Amphiprion_percula
ENSMICG00000008739	-	97	42.535	ENSATEG00000004998	safb	66	43.619	Anabas_testudineus
ENSMICG00000008739	-	89	63.007	ENSAPLG00000006355	-	99	63.962	Anas_platyrhynchos
ENSMICG00000008739	-	93	64.516	ENSAPLG00000005780	-	100	64.014	Anas_platyrhynchos
ENSMICG00000008739	-	100	92.108	ENSANAG00000028821	SAFB	100	92.933	Aotus_nancymaae
ENSMICG00000008739	-	89	44.025	ENSACLG00000001926	safb	64	43.214	Astatotilapia_calliptera
ENSMICG00000008739	-	91	44.637	ENSAMXG00000018154	safb	66	43.799	Astyanax_mexicanus
ENSMICG00000008739	-	100	86.942	ENSBTAG00000007875	SAFB	100	85.963	Bos_taurus
ENSMICG00000008739	-	84	92.925	ENSCJAG00000017081	SAFB	100	94.413	Callithrix_jacchus
ENSMICG00000008739	-	100	89.010	ENSCAFG00000018803	SAFB	87	89.771	Canis_familiaris
ENSMICG00000008739	-	100	89.010	ENSCAFG00020018943	SAFB	100	89.771	Canis_lupus_dingo
ENSMICG00000008739	-	100	85.963	ENSCHIG00000007262	SAFB	98	88.679	Capra_hircus
ENSMICG00000008739	-	63	80.377	ENSTSYG00000001851	-	54	93.431	Carlito_syrichta
ENSMICG00000008739	-	100	82.803	ENSCPOG00000026322	SAFB	100	83.864	Cavia_porcellus
ENSMICG00000008739	-	100	92.226	ENSCCAG00000020193	SAFB	100	93.051	Cebus_capucinus
ENSMICG00000008739	-	100	91.755	ENSCATG00000029994	SAFB	100	92.580	Cercocebus_atys
ENSMICG00000008739	-	100	86.126	ENSCLAG00000007734	SAFB	100	86.660	Chinchilla_lanigera
ENSMICG00000008739	-	100	91.394	ENSCSAG00000009949	SAFB	100	92.157	Chlorocebus_sabaeus
ENSMICG00000008739	-	86	90.476	ENSCHOG00000003208	SAFB	93	90.476	Choloepus_hoffmanni
ENSMICG00000008739	-	91	60.294	ENSCPBG00000010936	-	99	61.312	Chrysemys_picta_bellii
ENSMICG00000008739	-	91	63.669	ENSCPBG00000010928	-	99	63.669	Chrysemys_picta_bellii
ENSMICG00000008739	-	100	76.393	ENSCANG00000004774	-	100	96.500	Colobus_angolensis_palliatus
ENSMICG00000008739	-	100	85.948	ENSCANG00000019754	-	100	85.512	Colobus_angolensis_palliatus
ENSMICG00000008739	-	100	79.787	ENSCGRG00001002254	Safb	100	80.532	Cricetulus_griseus_chok1gshd
ENSMICG00000008739	-	89	78.906	ENSCGRG00000011529	Safb	96	79.818	Cricetulus_griseus_crigri
ENSMICG00000008739	-	93	43.230	ENSCSEG00000019870	safb	69	41.336	Cynoglossus_semilaevis
ENSMICG00000008739	-	93	41.169	ENSCVAG00000002226	safb	65	41.636	Cyprinodon_variegatus
ENSMICG00000008739	-	90	43.203	ENSDARG00000020467	safb	65	57.364	Danio_rerio
ENSMICG00000008739	-	100	88.043	ENSDNOG00000015746	SAFB	95	88.432	Dasypus_novemcinctus
ENSMICG00000008739	-	100	81.064	ENSDORG00000016200	Safb	100	82.265	Dipodomys_ordii
ENSMICG00000008739	-	80	84.286	ENSETEG00000018679	SAFB	77	85.156	Echinops_telfairi
ENSMICG00000008739	-	100	85.606	ENSEASG00005023019	SAFB	100	86.364	Equus_asinus_asinus
ENSMICG00000008739	-	100	86.725	ENSECAG00000018659	SAFB	89	87.704	Equus_caballus
ENSMICG00000008739	-	93	53.913	ENSELUG00000022327	safb	65	53.913	Esox_lucius
ENSMICG00000008739	-	100	89.119	ENSFCAG00000011835	SAFB	100	89.880	Felis_catus
ENSMICG00000008739	-	91	59.524	ENSFALG00000013881	-	99	61.061	Ficedula_albicollis
ENSMICG00000008739	-	100	64.086	ENSFALG00000013882	-	92	62.863	Ficedula_albicollis
ENSMICG00000008739	-	100	80.435	ENSFDAG00000020306	SAFB	100	85.290	Fukomys_damarensis
ENSMICG00000008739	-	75	58.120	ENSFHEG00000004219	safb	66	42.086	Fundulus_heteroclitus
ENSMICG00000008739	-	97	41.096	ENSGMOG00000014280	safb	65	40.909	Gadus_morhua
ENSMICG00000008739	-	100	61.924	ENSGALG00000001948	-	100	61.594	Gallus_gallus
ENSMICG00000008739	-	100	63.930	ENSGALG00000013365	-	100	62.959	Gallus_gallus
ENSMICG00000008739	-	94	38.749	ENSGAFG00000016162	safb	67	40.734	Gambusia_affinis
ENSMICG00000008739	-	97	42.473	ENSGACG00000011385	safb	67	41.734	Gasterosteus_aculeatus
ENSMICG00000008739	-	78	58.692	ENSGAGG00000017702	-	99	58.346	Gopherus_agassizii
ENSMICG00000008739	-	95	61.580	ENSGAGG00000008424	-	100	62.121	Gopherus_agassizii
ENSMICG00000008739	-	100	91.519	ENSGGOG00000015109	SAFB	100	92.344	Gorilla_gorilla
ENSMICG00000008739	-	97	40.872	ENSHBUG00000009218	safb	70	43.872	Haplochromis_burtoni
ENSMICG00000008739	-	100	85.653	ENSHGLG00000015883	SAFB	100	86.403	Heterocephalus_glaber_female
ENSMICG00000008739	-	100	81.884	ENSHGLG00100004228	SAFB	77	86.022	Heterocephalus_glaber_male
ENSMICG00000008739	-	91	38.249	ENSHCOG00000001705	safb	66	38.687	Hippocampus_comes
ENSMICG00000008739	-	95	44.075	ENSIPUG00000024869	safb2	66	46.497	Ictalurus_punctatus
ENSMICG00000008739	-	93	85.862	ENSSTOG00000002783	SAFB	100	87.126	Ictidomys_tridecemlineatus
ENSMICG00000008739	-	100	81.210	ENSJJAG00000009021	Safb	100	82.272	Jaculus_jaculus
ENSMICG00000008739	-	89	44.321	ENSKMAG00000022308	safb	66	41.091	Kryptolebias_marmoratus
ENSMICG00000008739	-	97	42.049	ENSLBEG00000006015	safb	65	44.951	Labrus_bergylta
ENSMICG00000008739	-	64	52.435	ENSLACG00000018090	SAFB	96	53.998	Latimeria_chalumnae
ENSMICG00000008739	-	86	60.177	ENSLOCG00000003613	safb	65	60.177	Lepisosteus_oculatus
ENSMICG00000008739	-	99	87.132	ENSLAFG00000003840	SAFB	98	87.818	Loxodonta_africana
ENSMICG00000008739	-	100	91.755	ENSMFAG00000003885	SAFB	100	92.580	Macaca_fascicularis
ENSMICG00000008739	-	100	91.755	ENSMMUG00000017970	SAFB	100	92.580	Macaca_mulatta
ENSMICG00000008739	-	100	88.562	ENSMNEG00000035637	SAFB	100	89.325	Macaca_nemestrina
ENSMICG00000008739	-	100	88.165	ENSMLEG00000038637	SAFB	100	87.188	Mandrillus_leucophaeus
ENSMICG00000008739	-	97	41.676	ENSMAMG00000003357	safb	60	40.976	Mastacembelus_armatus
ENSMICG00000008739	-	93	42.227	ENSMZEG00005009120	safb	66	42.605	Maylandia_zebra
ENSMICG00000008739	-	96	63.795	ENSMGAG00000001101	-	100	62.165	Meleagris_gallopavo
ENSMICG00000008739	-	89	58.944	ENSMGAG00000001051	-	100	60.144	Meleagris_gallopavo
ENSMICG00000008739	-	57	84.221	ENSMAUG00000005013	Safb	100	87.910	Mesocricetus_auratus
ENSMICG00000008739	-	100	80.426	ENSMOCG00000014040	Safb	100	81.170	Microtus_ochrogaster
ENSMICG00000008739	-	100	74.495	ENSMODG00000001236	SAFB	100	73.858	Monodelphis_domestica
ENSMICG00000008739	-	93	41.796	ENSMALG00000020330	safb	70	41.734	Monopterus_albus
ENSMICG00000008739	-	100	79.702	MGP_CAROLIEiJ_G0021780	Safb	100	80.871	Mus_caroli
ENSMICG00000008739	-	100	80.234	ENSMUSG00000071054	Safb	100	80.978	Mus_musculus
ENSMICG00000008739	-	100	79.299	MGP_PahariEiJ_G0020769	Safb	100	80.786	Mus_pahari
ENSMICG00000008739	-	100	88.248	ENSMPUG00000006123	SAFB	94	89.010	Mustela_putorius_furo
ENSMICG00000008739	-	100	88.248	ENSMLUG00000001081	SAFB	100	88.466	Myotis_lucifugus
ENSMICG00000008739	-	100	77.225	ENSNGAG00000019882	Safb	100	78.072	Nannospalax_galili
ENSMICG00000008739	-	96	91.468	ENSNLEG00000013551	SAFB	100	92.469	Nomascus_leucogenys
ENSMICG00000008739	-	88	81.204	ENSOPRG00000011561	-	100	82.310	Ochotona_princeps
ENSMICG00000008739	-	100	85.806	ENSODEG00000014838	SAFB	100	86.553	Octodon_degus
ENSMICG00000008739	-	93	42.889	ENSONIG00000002318	safb	66	43.577	Oreochromis_niloticus
ENSMICG00000008739	-	90	79.592	ENSOCUG00000014628	SAFB	64	83.774	Oryctolagus_cuniculus
ENSMICG00000008739	-	89	43.204	ENSORLG00000016989	safb	64	42.301	Oryzias_latipes
ENSMICG00000008739	-	95	38.662	ENSORLG00020000404	safb	70	42.832	Oryzias_latipes_hni
ENSMICG00000008739	-	95	42.198	ENSORLG00015010733	safb	64	42.478	Oryzias_latipes_hsok
ENSMICG00000008739	-	93	39.934	ENSOMEG00000009066	safb	65	40.759	Oryzias_melastigma
ENSMICG00000008739	-	100	93.122	ENSOGAG00000027769	SAFB	100	92.904	Otolemur_garnettii
ENSMICG00000008739	-	100	84.262	ENSOARG00000007662	-	100	83.497	Ovis_aries
ENSMICG00000008739	-	78	82.419	ENSOARG00000007856	-	100	81.716	Ovis_aries
ENSMICG00000008739	-	100	91.402	ENSPPAG00000035129	SAFB	100	92.226	Pan_paniscus
ENSMICG00000008739	-	100	89.119	ENSPPRG00000017197	SAFB	100	89.880	Panthera_pardus
ENSMICG00000008739	-	100	91.402	ENSPTRG00000010335	SAFB	100	92.226	Pan_troglodytes
ENSMICG00000008739	-	100	91.637	ENSPANG00000007770	SAFB	100	92.462	Papio_anubis
ENSMICG00000008739	-	93	43.388	ENSPKIG00000009902	safb	67	44.724	Paramormyrops_kingsleyae
ENSMICG00000008739	-	99	61.012	ENSPSIG00000009367	-	67	58.740	Pelodiscus_sinensis
ENSMICG00000008739	-	100	61.117	ENSPSIG00000011679	-	100	62.754	Pelodiscus_sinensis
ENSMICG00000008739	-	100	80.171	ENSPEMG00000020428	Safb	100	81.343	Peromyscus_maniculatus_bairdii
ENSMICG00000008739	-	63	79.558	ENSPCIG00000009504	-	99	79.600	Phascolarctos_cinereus
ENSMICG00000008739	-	94	39.503	ENSPFOG00000007745	safb	73	41.447	Poecilia_formosa
ENSMICG00000008739	-	94	37.459	ENSPLAG00000001614	safb	67	39.737	Poecilia_latipinna
ENSMICG00000008739	-	94	39.278	ENSPMEG00000021023	safb	69	40.232	Poecilia_mexicana
ENSMICG00000008739	-	93	40.479	ENSPREG00000012496	safb	66	40.820	Poecilia_reticulata
ENSMICG00000008739	-	100	91.285	ENSPPYG00000009428	SAFB	100	92.048	Pongo_abelii
ENSMICG00000008739	-	100	84.056	ENSPCAG00000006475	SAFB	100	83.189	Procavia_capensis
ENSMICG00000008739	-	100	92.435	ENSPCOG00000014090	SAFB	100	89.693	Propithecus_coquereli
ENSMICG00000008739	-	100	84.532	ENSPVAG00000004913	SAFB	100	81.284	Pteropus_vampyrus
ENSMICG00000008739	-	94	42.920	ENSPNAG00000021838	safb	65	44.605	Pygocentrus_nattereri
ENSMICG00000008739	-	100	80.170	ENSRNOG00000050543	Safb	100	81.442	Rattus_norvegicus
ENSMICG00000008739	-	100	77.317	ENSRBIG00000042509	SAFB	88	92.473	Rhinopithecus_bieti
ENSMICG00000008739	-	100	91.873	ENSRROG00000029278	SAFB	100	92.697	Rhinopithecus_roxellana
ENSMICG00000008739	-	100	92.226	ENSSBOG00000026291	SAFB	100	93.051	Saimiri_boliviensis_boliviensis
ENSMICG00000008739	-	97	45.117	ENSSFOG00015008156	safb	67	47.310	Scleropages_formosus
ENSMICG00000008739	-	97	41.398	ENSSMAG00000009316	safb	66	42.811	Scophthalmus_maximus
ENSMICG00000008739	-	97	43.764	ENSSDUG00000009652	safb	86	43.366	Seriola_dumerili
ENSMICG00000008739	-	97	43.469	ENSSLDG00000001670	safb	65	42.492	Seriola_lalandi_dorsalis
ENSMICG00000008739	-	93	81.165	ENSSARG00000010475	SAFB	100	81.680	Sorex_araneus
ENSMICG00000008739	-	89	57.090	ENSSPUG00000009747	-	99	59.426	Sphenodon_punctatus
ENSMICG00000008739	-	93	41.800	ENSSPAG00000015682	safb	69	41.987	Stegastes_partitus
ENSMICG00000008739	-	100	88.065	ENSSSCG00000013522	SAFB	99	89.859	Sus_scrofa
ENSMICG00000008739	-	96	63.270	ENSTGUG00000000502	-	100	63.382	Taeniopygia_guttata
ENSMICG00000008739	-	93	61.433	ENSTGUG00000000489	-	100	63.326	Taeniopygia_guttata
ENSMICG00000008739	-	90	42.684	ENSTRUG00000003567	safb	67	42.347	Takifugu_rubripes
ENSMICG00000008739	-	87	57.471	ENSTNIG00000015470	safb	74	57.471	Tetraodon_nigroviridis
ENSMICG00000008739	-	74	75.758	ENSTBEG00000013124	-	66	83.333	Tupaia_belangeri
ENSMICG00000008739	-	94	96.825	ENSTTRG00000013588	SAFB	92	96.825	Tursiops_truncatus
ENSMICG00000008739	-	85	86.183	ENSUAMG00000024543	SAFB	100	87.141	Ursus_americanus
ENSMICG00000008739	-	89	88.380	ENSUMAG00000009734	SAFB	95	88.567	Ursus_maritimus
ENSMICG00000008739	-	76	90.805	ENSVPAG00000012043	SAFB	78	92.373	Vicugna_pacos
ENSMICG00000008739	-	100	89.119	ENSVVUG00000013720	SAFB	87	89.880	Vulpes_vulpes
ENSMICG00000008739	-	67	50.654	ENSXETG00000008755	safb	99	51.546	Xenopus_tropicalis
ENSMICG00000008739	-	97	39.774	ENSXMAG00000003458	safb	66	40.459	Xiphophorus_maculatus