EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000008741 (Gene tree)
Gene ID: 105877452
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 27173 bases
Position: chr16:55153407-55180579
Accession: 105877452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000028182	ResIII	PF04851.15	1.4e-07	1	1
ENSMICP00000040307	ResIII	PF04851.15	1.4e-07	1	1
ENSMICP00000038342	ResIII	PF04851.15	1.4e-07	1	1
ENSMICP00000008017	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000008807	CHD3-201	7356	XM_020281011	ENSMICP00000008017	2058 (aa)	XP_020136600	UPI000989D62D
ENSMICT00000047074	CHD3-204	5871	-	ENSMICP00000040307	1956 (aa)	-	UPI000C2EC020
ENSMICT00000033207	CHD3-202	6045	-	ENSMICP00000038342	2014 (aa)	-	UPI000C2EA75B
ENSMICT00000030498	CHD3-203	5943	-	ENSMICP00000028182	1980 (aa)	-	UPI000C2ECE1C

Gene Model

Click here to download ENSMICG00000008741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000008741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000008741	CHD3	92	66.702	ENSMICG00000017862	CHD5	97	68.360
ENSMICG00000008741	CHD3	87	71.067	ENSMICG00000006588	-	96	70.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000008741	CHD3	100	98.981	ENSG00000170004	CHD3	100	98.981	Homo_sapiens
ENSMICG00000008741	CHD3	78	79.275	ENSAPOG00000005614	chd3	94	80.157	Acanthochromis_polyacanthus
ENSMICG00000008741	CHD3	70	97.216	ENSAMEG00000003025	-	100	97.287	Ailuropoda_melanoleuca
ENSMICG00000008741	CHD3	79	87.791	ENSACIG00000019671	chd3	99	87.791	Amphilophus_citrinellus
ENSMICG00000008741	CHD3	88	80.069	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSMICG00000008741	CHD3	88	80.069	ENSAPEG00000006341	chd3	96	73.984	Amphiprion_percula
ENSMICG00000008741	CHD3	88	80.969	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSMICG00000008741	CHD3	97	82.332	ENSACAG00000004276	CHD3	95	84.573	Anolis_carolinensis
ENSMICG00000008741	CHD3	100	95.384	ENSANAG00000034323	CHD3	99	98.775	Aotus_nancymaae
ENSMICG00000008741	CHD3	90	80.386	ENSACLG00000009222	chd3	99	73.560	Astatotilapia_calliptera
ENSMICG00000008741	CHD3	100	97.767	ENSBTAG00000014377	CHD3	100	97.767	Bos_taurus
ENSMICG00000008741	CHD3	100	98.834	ENSCJAG00000014766	CHD3	100	98.834	Callithrix_jacchus
ENSMICG00000008741	CHD3	100	94.514	ENSCAFG00000016859	CHD3	98	98.120	Canis_familiaris
ENSMICG00000008741	CHD3	94	95.112	ENSCAFG00020007422	CHD3	100	98.036	Canis_lupus_dingo
ENSMICG00000008741	CHD3	99	95.392	ENSCHIG00000016737	CHD3	99	98.222	Capra_hircus
ENSMICG00000008741	CHD3	100	95.464	ENSTSYG00000035658	CHD3	98	98.933	Carlito_syrichta
ENSMICG00000008741	CHD3	96	95.376	ENSCAPG00000014864	CHD3	98	95.376	Cavia_aperea
ENSMICG00000008741	CHD3	96	97.917	ENSCPOG00000022653	CHD3	98	97.917	Cavia_porcellus
ENSMICG00000008741	CHD3	100	98.689	ENSCCAG00000034792	CHD3	100	98.689	Cebus_capucinus
ENSMICG00000008741	CHD3	100	98.835	ENSCATG00000041717	CHD3	100	98.835	Cercocebus_atys
ENSMICG00000008741	CHD3	99	95.538	ENSCLAG00000010523	CHD3	100	98.271	Chinchilla_lanigera
ENSMICG00000008741	CHD3	99	95.844	ENSCSAG00000011122	CHD3	99	98.629	Chlorocebus_sabaeus
ENSMICG00000008741	CHD3	87	83.576	ENSCPBG00000011966	CHD3	99	87.110	Chrysemys_picta_bellii
ENSMICG00000008741	CHD3	100	95.414	ENSCANG00000037641	CHD3	98	98.781	Colobus_angolensis_palliatus
ENSMICG00000008741	CHD3	99	94.425	ENSCGRG00001011306	Chd3	100	97.205	Cricetulus_griseus_chok1gshd
ENSMICG00000008741	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSMICG00000008741	CHD3	89	79.538	ENSCSEG00000004489	chd3	99	76.288	Cynoglossus_semilaevis
ENSMICG00000008741	CHD3	86	82.258	ENSCVAG00000007293	chd3	95	82.258	Cyprinodon_variegatus
ENSMICG00000008741	CHD3	87	82.215	ENSDARG00000021405	chd3	99	75.550	Danio_rerio
ENSMICG00000008741	CHD3	99	80.919	ENSDNOG00000047846	CHD3	98	83.561	Dasypus_novemcinctus
ENSMICG00000008741	CHD3	99	94.777	ENSDORG00000010713	Chd3	100	97.560	Dipodomys_ordii
ENSMICG00000008741	CHD3	97	90.688	ENSETEG00000017733	CHD3	100	92.008	Echinops_telfairi
ENSMICG00000008741	CHD3	54	79.245	ENSEBUG00000008310	chd3	99	70.596	Eptatretus_burgeri
ENSMICG00000008741	CHD3	92	95.321	ENSEASG00005019360	CHD3	100	98.309	Equus_asinus_asinus
ENSMICG00000008741	CHD3	92	95.375	ENSECAG00000010051	CHD3	100	98.363	Equus_caballus
ENSMICG00000008741	CHD3	91	98.305	ENSEEUG00000015205	CHD3	93	98.305	Erinaceus_europaeus
ENSMICG00000008741	CHD3	76	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSMICG00000008741	CHD3	100	97.767	ENSFCAG00000009629	CHD3	100	97.767	Felis_catus
ENSMICG00000008741	CHD3	99	92.947	ENSFDAG00000008220	CHD3	99	95.833	Fukomys_damarensis
ENSMICG00000008741	CHD3	87	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSMICG00000008741	CHD3	57	74.915	ENSGAFG00000004055	chd3	99	76.581	Gambusia_affinis
ENSMICG00000008741	CHD3	97	69.536	ENSGACG00000019275	chd3	100	70.947	Gasterosteus_aculeatus
ENSMICG00000008741	CHD3	73	86.039	ENSGAGG00000013164	CHD3	98	86.917	Gopherus_agassizii
ENSMICG00000008741	CHD3	100	95.513	ENSGGOG00000013496	CHD3	98	98.933	Gorilla_gorilla
ENSMICG00000008741	CHD3	99	98.098	ENSHGLG00000012017	CHD3	100	98.098	Heterocephalus_glaber_female
ENSMICG00000008741	CHD3	88	90.883	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSMICG00000008741	CHD3	93	70.806	ENSHCOG00000010170	chd3	96	73.499	Hippocampus_comes
ENSMICG00000008741	CHD3	81	80.565	ENSIPUG00000003271	chd3	96	79.848	Ictalurus_punctatus
ENSMICG00000008741	CHD3	99	96.047	ENSSTOG00000025907	CHD3	99	98.831	Ictidomys_tridecemlineatus
ENSMICG00000008741	CHD3	100	93.756	ENSJJAG00000017633	Chd3	100	97.306	Jaculus_jaculus
ENSMICG00000008741	CHD3	85	90.047	ENSKMAG00000019292	chd3	97	74.801	Kryptolebias_marmoratus
ENSMICG00000008741	CHD3	93	67.924	ENSLBEG00000028485	chd3	93	76.344	Labrus_bergylta
ENSMICG00000008741	CHD3	93	74.368	ENSLACG00000008031	CHD3	98	73.894	Latimeria_chalumnae
ENSMICG00000008741	CHD3	97	75.150	ENSLOCG00000013965	chd3	97	77.640	Lepisosteus_oculatus
ENSMICG00000008741	CHD3	92	94.224	ENSLAFG00000000572	CHD3	100	94.224	Loxodonta_africana
ENSMICG00000008741	CHD3	100	95.563	ENSMFAG00000020113	CHD3	98	98.883	Macaca_fascicularis
ENSMICG00000008741	CHD3	100	93.220	ENSMMUG00000022221	CHD3	99	95.657	Macaca_mulatta
ENSMICG00000008741	CHD3	100	95.513	ENSMNEG00000001728	CHD3	99	98.252	Macaca_nemestrina
ENSMICG00000008741	CHD3	100	95.563	ENSMLEG00000032249	CHD3	98	98.933	Mandrillus_leucophaeus
ENSMICG00000008741	CHD3	85	73.147	ENSMAMG00000000564	chd3	93	87.209	Mastacembelus_armatus
ENSMICG00000008741	CHD3	100	93.199	ENSMAUG00000013873	Chd3	100	93.199	Mesocricetus_auratus
ENSMICG00000008741	CHD3	98	94.566	ENSMOCG00000004848	Chd3	100	97.301	Microtus_ochrogaster
ENSMICG00000008741	CHD3	94	71.835	ENSMMOG00000012699	chd3	99	73.579	Mola_mola
ENSMICG00000008741	CHD3	92	90.027	ENSMODG00000007509	CHD3	100	92.639	Monodelphis_domestica
ENSMICG00000008741	CHD3	99	96.741	MGP_CAROLIEiJ_G0016564	Chd3	100	96.741	Mus_caroli
ENSMICG00000008741	CHD3	100	96.846	ENSMUSG00000018474	Chd3	100	96.846	Mus_musculus
ENSMICG00000008741	CHD3	99	96.934	MGP_PahariEiJ_G0017695	Chd3	100	96.934	Mus_pahari
ENSMICG00000008741	CHD3	100	96.798	MGP_SPRETEiJ_G0017400	Chd3	100	96.798	Mus_spretus
ENSMICG00000008741	CHD3	86	94.878	ENSMPUG00000008861	CHD3	100	97.841	Mustela_putorius_furo
ENSMICG00000008741	CHD3	100	94.059	ENSMLUG00000014643	-	98	97.360	Myotis_lucifugus
ENSMICG00000008741	CHD3	96	97.612	ENSNGAG00000000773	Chd3	98	97.612	Nannospalax_galili
ENSMICG00000008741	CHD3	85	72.733	ENSNBRG00000000636	chd3	97	75.998	Neolamprologus_brichardi
ENSMICG00000008741	CHD3	99	91.675	ENSNLEG00000009770	CHD3	100	95.745	Nomascus_leucogenys
ENSMICG00000008741	CHD3	84	91.233	ENSMEUG00000005852	CHD3	87	91.484	Notamacropus_eugenii
ENSMICG00000008741	CHD3	94	93.770	ENSOPRG00000011069	CHD3	100	96.690	Ochotona_princeps
ENSMICG00000008741	CHD3	96	98.018	ENSODEG00000017785	CHD3	99	98.018	Octodon_degus
ENSMICG00000008741	CHD3	73	78.092	ENSONIG00000009292	chd3	100	75.115	Oreochromis_niloticus
ENSMICG00000008741	CHD3	98	90.761	ENSOCUG00000029299	CHD3	100	93.340	Oryctolagus_cuniculus
ENSMICG00000008741	CHD3	79	70.748	ENSORLG00000007107	chd3	93	71.110	Oryzias_latipes
ENSMICG00000008741	CHD3	55	73.104	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSMICG00000008741	CHD3	79	81.500	ENSOMEG00000013691	chd3	99	77.148	Oryzias_melastigma
ENSMICG00000008741	CHD3	99	96.148	ENSOGAG00000003216	CHD3	99	98.780	Otolemur_garnettii
ENSMICG00000008741	CHD3	96	95.789	ENSOARG00000017855	CHD3	99	95.789	Ovis_aries
ENSMICG00000008741	CHD3	100	93.366	ENSPPAG00000032886	CHD3	98	96.697	Pan_paniscus
ENSMICG00000008741	CHD3	98	97.726	ENSPPRG00000000626	CHD3	100	97.726	Panthera_pardus
ENSMICG00000008741	CHD3	100	99.077	ENSPTRG00000008714	CHD3	100	99.077	Pan_troglodytes
ENSMICG00000008741	CHD3	100	97.330	ENSPANG00000023938	CHD3	100	97.330	Papio_anubis
ENSMICG00000008741	CHD3	94	79.257	ENSPKIG00000006305	chd3	99	80.364	Paramormyrops_kingsleyae
ENSMICG00000008741	CHD3	53	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSMICG00000008741	CHD3	99	94.374	ENSPEMG00000014262	Chd3	99	97.056	Peromyscus_maniculatus_bairdii
ENSMICG00000008741	CHD3	99	89.909	ENSPCIG00000005442	CHD3	98	95.142	Phascolarctos_cinereus
ENSMICG00000008741	CHD3	88	79.452	ENSPFOG00000012464	chd3	92	73.933	Poecilia_formosa
ENSMICG00000008741	CHD3	86	83.065	ENSPLAG00000002887	chd3	96	83.065	Poecilia_latipinna
ENSMICG00000008741	CHD3	51	81.490	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSMICG00000008741	CHD3	89	83.764	ENSPREG00000011044	chd3	99	78.687	Poecilia_reticulata
ENSMICG00000008741	CHD3	100	91.109	ENSPPYG00000007940	CHD3	98	95.959	Pongo_abelii
ENSMICG00000008741	CHD3	95	97.504	ENSPCAG00000004350	CHD3	96	97.575	Procavia_capensis
ENSMICG00000008741	CHD3	99	99.611	ENSPCOG00000020952	CHD3	100	99.611	Propithecus_coquereli
ENSMICG00000008741	CHD3	85	96.960	ENSPVAG00000016344	CHD3	87	97.108	Pteropus_vampyrus
ENSMICG00000008741	CHD3	93	75.485	ENSPNAG00000020393	chd3	98	80.629	Pygocentrus_nattereri
ENSMICG00000008741	CHD3	92	93.808	ENSRNOG00000009722	Chd3	100	96.786	Rattus_norvegicus
ENSMICG00000008741	CHD3	100	92.368	ENSRBIG00000033562	CHD3	99	95.043	Rhinopithecus_bieti
ENSMICG00000008741	CHD3	100	93.918	ENSRROG00000029554	CHD3	100	96.737	Rhinopithecus_roxellana
ENSMICG00000008741	CHD3	100	95.464	ENSSBOG00000020719	CHD3	99	98.362	Saimiri_boliviensis_boliviensis
ENSMICG00000008741	CHD3	98	90.464	ENSSHAG00000014412	CHD3	100	92.959	Sarcophilus_harrisii
ENSMICG00000008741	CHD3	90	74.164	ENSSFOG00015023123	chd3	98	75.549	Scleropages_formosus
ENSMICG00000008741	CHD3	77	91.304	ENSSMAG00000006451	chd3	99	75.630	Scophthalmus_maximus
ENSMICG00000008741	CHD3	53	72.570	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSMICG00000008741	CHD3	88	79.725	ENSSPAG00000013694	chd3	97	87.209	Stegastes_partitus
ENSMICG00000008741	CHD3	99	95.349	ENSSSCG00000021363	CHD3	100	98.146	Sus_scrofa
ENSMICG00000008741	CHD3	72	76.760	ENSTRUG00000014990	chd3	93	74.018	Takifugu_rubripes
ENSMICG00000008741	CHD3	96	70.066	ENSTNIG00000012998	chd3	99	72.014	Tetraodon_nigroviridis
ENSMICG00000008741	CHD3	62	97.608	ENSTBEG00000011454	-	71	97.608	Tupaia_belangeri
ENSMICG00000008741	CHD3	95	99.074	ENSTTRG00000010295	CHD3	97	99.074	Tursiops_truncatus
ENSMICG00000008741	CHD3	92	94.137	ENSUAMG00000005475	CHD3	99	97.006	Ursus_americanus
ENSMICG00000008741	CHD3	54	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSMICG00000008741	CHD3	92	98.091	ENSVVUG00000028011	CHD3	99	97.922	Vulpes_vulpes
ENSMICG00000008741	CHD3	97	70.946	ENSXETG00000012991	chd3	97	69.132	Xenopus_tropicalis
ENSMICG00000008741	CHD3	50	78.002	ENSXCOG00000000809	chd3	96	83.202	Xiphophorus_couchianus
ENSMICG00000008741	CHD3	77	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus