EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000009130 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 479 bases
Position: chr23:18120898-18121376
Accession: 109729991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000008310	zf-U1	PF06220.12	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000009125	-	435	XM_020283732	ENSMICP00000008310	144 (aa)	XP_020139321	UPI00085AEF3E

Gene Model

Click here to download ENSMICG00000009130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000009130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000009130	-	100	84.177	ENSMICG00000007339	-	100	86.076
ENSMICG00000009130	-	100	79.470	ENSMICG00000036552	-	87	86.486
ENSMICG00000009130	-	100	88.050	ENSMICG00000032183	-	100	87.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000009130	-	100	88.679	ENSG00000124562	SNRPC	100	88.050	Homo_sapiens
ENSMICG00000009130	-	100	86.792	ENSAMEG00000000963	SNRPC	87	87.261	Ailuropoda_melanoleuca
ENSMICG00000009130	-	100	84.277	ENSACAG00000015721	SNRPC	87	84.713	Anolis_carolinensis
ENSMICG00000009130	-	100	88.050	ENSANAG00000007843	-	100	87.421	Aotus_nancymaae
ENSMICG00000009130	-	100	79.333	ENSANAG00000021026	-	100	81.333	Aotus_nancymaae
ENSMICG00000009130	-	100	84.277	ENSANAG00000019157	-	100	83.648	Aotus_nancymaae
ENSMICG00000009130	-	100	90.000	ENSANAG00000019726	-	92	90.667	Aotus_nancymaae
ENSMICG00000009130	-	100	88.679	ENSANAG00000019696	-	100	88.050	Aotus_nancymaae
ENSMICG00000009130	-	99	81.646	ENSANAG00000020588	-	92	78.481	Aotus_nancymaae
ENSMICG00000009130	-	100	88.679	ENSBTAG00000024549	SNRPC	100	88.050	Bos_taurus
ENSMICG00000009130	-	100	87.421	ENSCJAG00000043055	-	100	86.792	Callithrix_jacchus
ENSMICG00000009130	-	100	86.164	ENSCJAG00000041822	-	100	85.535	Callithrix_jacchus
ENSMICG00000009130	-	100	88.679	ENSCJAG00000015321	-	100	88.050	Callithrix_jacchus
ENSMICG00000009130	-	100	71.069	ENSCAFG00000025525	-	100	74.214	Canis_familiaris
ENSMICG00000009130	-	53	100.000	ENSCAFG00000001231	-	61	100.000	Canis_familiaris
ENSMICG00000009130	-	100	81.132	ENSCAFG00000031775	-	100	84.277	Canis_familiaris
ENSMICG00000009130	-	100	81.875	ENSCAFG00000028988	-	100	80.625	Canis_familiaris
ENSMICG00000009130	-	100	88.679	ENSCAFG00020005945	-	100	88.050	Canis_lupus_dingo
ENSMICG00000009130	-	100	81.132	ENSCAFG00020017383	-	100	84.277	Canis_lupus_dingo
ENSMICG00000009130	-	100	85.535	ENSCAFG00020005758	-	99	85.350	Canis_lupus_dingo
ENSMICG00000009130	-	100	75.658	ENSCHIG00000005039	-	100	73.684	Capra_hircus
ENSMICG00000009130	-	100	88.050	ENSCHIG00000012087	-	100	87.421	Capra_hircus
ENSMICG00000009130	-	100	88.679	ENSTSYG00000011216	-	100	88.050	Carlito_syrichta
ENSMICG00000009130	-	100	68.707	ENSTSYG00000025721	-	100	66.667	Carlito_syrichta
ENSMICG00000009130	-	88	87.324	ENSCAPG00000005161	SNRPC	100	86.620	Cavia_aperea
ENSMICG00000009130	-	100	88.679	ENSCPOG00000008563	SNRPC	100	88.050	Cavia_porcellus
ENSMICG00000009130	-	100	83.648	ENSCCAG00000036059	-	89	83.019	Cebus_capucinus
ENSMICG00000009130	-	98	68.590	ENSCCAG00000022209	-	95	67.949	Cebus_capucinus
ENSMICG00000009130	-	100	77.083	ENSCCAG00000028293	-	100	70.833	Cebus_capucinus
ENSMICG00000009130	-	99	71.622	ENSCCAG00000026624	-	66	69.014	Cebus_capucinus
ENSMICG00000009130	-	98	80.769	ENSCCAG00000022751	-	95	80.128	Cebus_capucinus
ENSMICG00000009130	-	100	88.679	ENSCATG00000035787	SNRPC	100	88.050	Cercocebus_atys
ENSMICG00000009130	-	100	88.679	ENSCLAG00000016920	SNRPC	100	88.050	Chinchilla_lanigera
ENSMICG00000009130	-	100	69.811	ENSCHOG00000011439	SNRPC	88	71.975	Choloepus_hoffmanni
ENSMICG00000009130	-	100	86.164	ENSCPBG00000027142	SNRPC	100	85.535	Chrysemys_picta_bellii
ENSMICG00000009130	-	100	88.679	ENSCANG00000028035	SNRPC	100	88.050	Colobus_angolensis_palliatus
ENSMICG00000009130	-	100	88.050	ENSCGRG00001009011	-	100	87.421	Cricetulus_griseus_chok1gshd
ENSMICG00000009130	-	100	76.101	ENSCGRG00001021483	-	100	76.552	Cricetulus_griseus_chok1gshd
ENSMICG00000009130	-	100	86.164	ENSCGRG00000005005	Snrpc	99	86.624	Cricetulus_griseus_crigri
ENSMICG00000009130	-	58	100.000	ENSDNOG00000042403	-	72	100.000	Dasypus_novemcinctus
ENSMICG00000009130	-	100	87.421	ENSDNOG00000034699	-	99	86.792	Dasypus_novemcinctus
ENSMICG00000009130	-	100	81.699	ENSDORG00000005955	Snrpc	66	82.119	Dipodomys_ordii
ENSMICG00000009130	-	94	84.672	ENSDORG00000029823	-	56	96.104	Dipodomys_ordii
ENSMICG00000009130	-	58	95.181	ENSETEG00000008756	-	75	94.805	Echinops_telfairi
ENSMICG00000009130	-	100	88.679	ENSEASG00005021007	SNRPC	100	88.050	Equus_asinus_asinus
ENSMICG00000009130	-	100	88.679	ENSECAG00000026848	SNRPC	100	88.050	Equus_caballus
ENSMICG00000009130	-	99	68.354	ENSEEUG00000014633	SNRPC	90	69.620	Erinaceus_europaeus
ENSMICG00000009130	-	100	71.779	ENSELUG00000020489	snrpc	100	63.354	Esox_lucius
ENSMICG00000009130	-	100	65.409	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSMICG00000009130	-	100	88.679	ENSFCAG00000044077	-	100	88.050	Felis_catus
ENSMICG00000009130	-	100	87.421	ENSFALG00000003756	SNRPC	100	86.792	Ficedula_albicollis
ENSMICG00000009130	-	100	88.679	ENSFDAG00000018111	SNRPC	100	88.050	Fukomys_damarensis
ENSMICG00000009130	-	100	85.625	ENSGALG00000002773	SNRPC	100	85.000	Gallus_gallus
ENSMICG00000009130	-	100	86.164	ENSGAGG00000003063	SNRPC	100	85.535	Gopherus_agassizii
ENSMICG00000009130	-	100	88.679	ENSGGOG00000012499	SNRPC	100	88.050	Gorilla_gorilla
ENSMICG00000009130	-	100	88.679	ENSHGLG00000013981	SNRPC	100	88.050	Heterocephalus_glaber_female
ENSMICG00000009130	-	79	81.579	ENSHGLG00000005871	-	100	75.694	Heterocephalus_glaber_female
ENSMICG00000009130	-	100	76.974	ENSHGLG00000017741	-	100	75.658	Heterocephalus_glaber_female
ENSMICG00000009130	-	100	76.974	ENSHGLG00100010786	-	100	75.658	Heterocephalus_glaber_male
ENSMICG00000009130	-	100	88.679	ENSHGLG00100009478	SNRPC	100	88.050	Heterocephalus_glaber_male
ENSMICG00000009130	-	100	84.277	ENSHGLG00100017764	-	100	83.648	Heterocephalus_glaber_male
ENSMICG00000009130	-	100	76.101	ENSIPUG00000024851	snrpc	100	76.101	Ictalurus_punctatus
ENSMICG00000009130	-	100	88.679	ENSSTOG00000013786	SNRPC	100	88.050	Ictidomys_tridecemlineatus
ENSMICG00000009130	-	100	88.050	ENSJJAG00000021741	Snrpc	100	87.421	Jaculus_jaculus
ENSMICG00000009130	-	100	88.679	ENSLAFG00000013534	SNRPC	100	88.050	Loxodonta_africana
ENSMICG00000009130	-	100	89.308	ENSMFAG00000030525	-	100	89.308	Macaca_fascicularis
ENSMICG00000009130	-	100	88.679	ENSMFAG00000031764	-	100	88.050	Macaca_fascicularis
ENSMICG00000009130	-	100	90.000	ENSMMUG00000039415	-	100	90.667	Macaca_mulatta
ENSMICG00000009130	-	100	87.421	ENSMMUG00000000869	-	100	86.364	Macaca_mulatta
ENSMICG00000009130	-	100	88.679	ENSMNEG00000032731	SNRPC	100	88.050	Macaca_nemestrina
ENSMICG00000009130	-	100	88.679	ENSMLEG00000033916	-	100	88.050	Mandrillus_leucophaeus
ENSMICG00000009130	-	97	73.611	ENSMLEG00000039724	-	81	70.139	Mandrillus_leucophaeus
ENSMICG00000009130	-	100	83.019	ENSMGAG00000006054	SNRPC	100	84.906	Meleagris_gallopavo
ENSMICG00000009130	-	100	88.050	ENSMOCG00000017609	Snrpc	100	87.421	Microtus_ochrogaster
ENSMICG00000009130	-	100	87.421	ENSMODG00000013904	-	100	86.792	Monodelphis_domestica
ENSMICG00000009130	-	100	81.250	ENSMODG00000025263	-	100	81.944	Monodelphis_domestica
ENSMICG00000009130	-	100	71.429	ENSMALG00000001197	snrpc	100	71.429	Monopterus_albus
ENSMICG00000009130	-	100	88.050	MGP_CAROLIEiJ_G0021308	Snrpc	100	87.421	Mus_caroli
ENSMICG00000009130	-	100	88.050	ENSMUSG00000024217	Snrpc	100	87.421	Mus_musculus
ENSMICG00000009130	-	53	98.701	MGP_SPRETEiJ_G0022221	-	64	98.701	Mus_spretus
ENSMICG00000009130	-	100	86.792	ENSMPUG00000003210	SNRPC	99	87.261	Mustela_putorius_furo
ENSMICG00000009130	-	100	86.792	ENSMLUG00000002488	SNRPC	99	87.261	Myotis_lucifugus
ENSMICG00000009130	-	100	88.050	ENSNGAG00000019686	Snrpc	100	87.421	Nannospalax_galili
ENSMICG00000009130	-	100	88.679	ENSNLEG00000034810	SNRPC	100	88.050	Nomascus_leucogenys
ENSMICG00000009130	-	88	86.620	ENSMEUG00000009300	SNRPC	100	85.915	Notamacropus_eugenii
ENSMICG00000009130	-	100	87.421	ENSODEG00000019633	-	100	86.792	Octodon_degus
ENSMICG00000009130	-	100	88.679	ENSODEG00000018985	-	100	88.050	Octodon_degus
ENSMICG00000009130	-	100	88.679	ENSODEG00000017080	-	100	88.050	Octodon_degus
ENSMICG00000009130	-	66	92.632	ENSODEG00000006008	-	55	97.403	Octodon_degus
ENSMICG00000009130	-	100	88.679	ENSODEG00000020370	-	100	88.050	Octodon_degus
ENSMICG00000009130	-	100	88.050	ENSODEG00000020201	-	100	87.421	Octodon_degus
ENSMICG00000009130	-	88	84.247	ENSOANG00000003405	SNRPC	99	83.562	Ornithorhynchus_anatinus
ENSMICG00000009130	-	100	88.679	ENSOCUG00000026668	-	100	88.050	Oryctolagus_cuniculus
ENSMICG00000009130	-	53	98.701	ENSOCUG00000023292	-	100	85.535	Oryctolagus_cuniculus
ENSMICG00000009130	-	100	87.421	ENSOCUG00000026430	-	99	86.792	Oryctolagus_cuniculus
ENSMICG00000009130	-	97	73.203	ENSOGAG00000028405	-	99	75.163	Otolemur_garnettii
ENSMICG00000009130	-	100	86.792	ENSOGAG00000026269	-	100	86.792	Otolemur_garnettii
ENSMICG00000009130	-	97	88.387	ENSOGAG00000008755	-	88	87.261	Otolemur_garnettii
ENSMICG00000009130	-	100	88.679	ENSOARG00000010823	SNRPC	100	88.050	Ovis_aries
ENSMICG00000009130	-	100	88.679	ENSPPAG00000043871	SNRPC	100	88.050	Pan_paniscus
ENSMICG00000009130	-	100	88.679	ENSPPRG00000008647	-	100	88.050	Panthera_pardus
ENSMICG00000009130	-	97	66.429	ENSPTIG00000013329	-	50	83.117	Panthera_tigris_altaica
ENSMICG00000009130	-	100	88.679	ENSPTIG00000021867	-	100	88.050	Panthera_tigris_altaica
ENSMICG00000009130	-	100	88.679	ENSPTRG00000018070	SNRPC	100	88.050	Pan_troglodytes
ENSMICG00000009130	-	100	88.679	ENSPANG00000022802	-	100	88.050	Papio_anubis
ENSMICG00000009130	-	65	86.022	ENSPKIG00000003136	snrpc	50	92.308	Paramormyrops_kingsleyae
ENSMICG00000009130	-	99	84.713	ENSPSIG00000004876	SNRPC	77	84.076	Pelodiscus_sinensis
ENSMICG00000009130	-	98	67.606	ENSPMGG00000022162	snrpc	99	59.732	Periophthalmus_magnuspinnatus
ENSMICG00000009130	-	100	88.742	ENSPEMG00000002763	-	100	86.755	Peromyscus_maniculatus_bairdii
ENSMICG00000009130	-	100	88.050	ENSPEMG00000010773	Snrpc	100	87.421	Peromyscus_maniculatus_bairdii
ENSMICG00000009130	-	58	100.000	ENSPPYG00000029902	-	84	100.000	Pongo_abelii
ENSMICG00000009130	-	100	86.792	ENSPCAG00000016885	SNRPC	90	87.261	Procavia_capensis
ENSMICG00000009130	-	100	88.679	ENSPCOG00000004904	SNRPC	100	88.050	Propithecus_coquereli
ENSMICG00000009130	-	100	86.164	ENSPVAG00000015597	SNRPC	87	86.624	Pteropus_vampyrus
ENSMICG00000009130	-	100	88.050	ENSRNOG00000000493	Snrpc	100	87.421	Rattus_norvegicus
ENSMICG00000009130	-	100	88.679	ENSRBIG00000014819	-	100	88.050	Rhinopithecus_bieti
ENSMICG00000009130	-	100	84.277	ENSRBIG00000022998	-	100	87.421	Rhinopithecus_bieti
ENSMICG00000009130	-	100	88.679	ENSRBIG00000037567	-	100	88.050	Rhinopithecus_bieti
ENSMICG00000009130	-	100	88.679	ENSRROG00000041300	SNRPC	100	88.050	Rhinopithecus_roxellana
ENSMICG00000009130	-	100	88.679	ENSSBOG00000031528	-	100	88.050	Saimiri_boliviensis_boliviensis
ENSMICG00000009130	-	98	91.489	ENSSBOG00000032882	-	93	91.489	Saimiri_boliviensis_boliviensis
ENSMICG00000009130	-	94	72.535	ENSSBOG00000032361	-	51	79.221	Saimiri_boliviensis_boliviensis
ENSMICG00000009130	-	99	87.261	ENSSHAG00000000945	-	87	86.624	Sarcophilus_harrisii
ENSMICG00000009130	-	100	81.250	ENSSHAG00000002972	-	100	81.944	Sarcophilus_harrisii
ENSMICG00000009130	-	100	76.101	ENSSARG00000008970	SNRPC	89	76.101	Sorex_araneus
ENSMICG00000009130	-	100	86.792	ENSSPUG00000002502	SNRPC	100	86.164	Sphenodon_punctatus
ENSMICG00000009130	-	100	88.679	ENSSSCG00000001531	SNRPC	100	88.050	Sus_scrofa
ENSMICG00000009130	-	100	86.164	ENSTGUG00000001773	SNRPC	99	86.076	Taeniopygia_guttata
ENSMICG00000009130	-	98	80.142	ENSTBEG00000015356	-	55	92.208	Tupaia_belangeri
ENSMICG00000009130	-	100	86.792	ENSTTRG00000007827	SNRPC	86	87.261	Tursiops_truncatus
ENSMICG00000009130	-	53	100.000	ENSUAMG00000014125	SNRPC	52	100.000	Ursus_americanus
ENSMICG00000009130	-	88	74.648	ENSVPAG00000003106	SNRPC	79	74.648	Vicugna_pacos
ENSMICG00000009130	-	100	87.421	ENSVVUG00000021947	-	100	86.792	Vulpes_vulpes
ENSMICG00000009130	-	98	87.179	ENSVVUG00000010467	-	87	87.179	Vulpes_vulpes