EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000009880 (Gene tree)
Gene ID: 105876922
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 7803 bases
Position: chr22:25434234-25442036
Accession: 105876922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024048	RRM_1	PF00076.22	7.4e-18	1	1
ENSMICP00000028245	RRM_1	PF00076.22	8.1e-18	1	1
ENSMICP00000009000	RRM_1	PF00076.22	8.4e-18	1	1
ENSMICP00000049997	RRM_1	PF00076.22	8.8e-18	1	1
ENSMICP00000016929	RRM_1	PF00076.22	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000027327	RBM42-205	1152	-	ENSMICP00000032450	383 (aa)	-	UPI00085AF446
ENSMICT00000050594	RBM42-204	1272	-	ENSMICP00000024048	423 (aa)	-	UPI00085B3398
ENSMICT00000009882	RBM42-202	1389	-	ENSMICP00000009000	462 (aa)	-	UPI000C2ED524
ENSMICT00000033999	RBM42-203	1368	XM_012775034	ENSMICP00000028245	455 (aa)	XP_012630488	UPI00085B01FF
ENSMICT00000062838	RBM42-201	1698	XM_012775033	ENSMICP00000049997	477 (aa)	XP_012630487	UPI000177420F
ENSMICT00000042553	RBM42-206	546	-	ENSMICP00000016929	181 (aa)	-	UPI00085B10B9

Gene Model

Click here to download ENSMICG00000009880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000009880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000009880	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSMICG00000009880	RBM42	100	100.000	ENSAMEG00000000524	RBM42	100	98.330	Ailuropoda_melanoleuca
ENSMICG00000009880	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSMICG00000009880	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.901	Bos_taurus
ENSMICG00000009880	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSMICG00000009880	RBM42	100	100.000	ENSCAFG00020018628	RBM42	100	96.739	Canis_lupus_dingo
ENSMICG00000009880	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.904	Capra_hircus
ENSMICG00000009880	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSMICG00000009880	RBM42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSMICG00000009880	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	98.532	Cavia_porcellus
ENSMICG00000009880	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSMICG00000009880	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSMICG00000009880	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.904	Chinchilla_lanigera
ENSMICG00000009880	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	96.943	Chlorocebus_sabaeus
ENSMICG00000009880	RBM42	100	88.679	ENSCANG00000030272	RBM42	100	88.679	Colobus_angolensis_palliatus
ENSMICG00000009880	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.484	Cricetulus_griseus_chok1gshd
ENSMICG00000009880	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	97.708	Dasypus_novemcinctus
ENSMICG00000009880	RBM42	100	97.484	ENSDORG00000013001	Rbm42	99	97.484	Dipodomys_ordii
ENSMICG00000009880	RBM42	93	94.203	ENSETEG00000007878	RBM42	74	94.203	Echinops_telfairi
ENSMICG00000009880	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	97.363	Equus_asinus_asinus
ENSMICG00000009880	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	97.363	Equus_caballus
ENSMICG00000009880	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSMICG00000009880	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.868	Fukomys_damarensis
ENSMICG00000009880	RBM42	73	97.183	ENSGAGG00000014805	RBM42	64	92.086	Gopherus_agassizii
ENSMICG00000009880	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSMICG00000009880	RBM42	100	96.017	ENSHGLG00000008418	RBM42	99	96.017	Heterocephalus_glaber_female
ENSMICG00000009880	RBM42	100	96.017	ENSHGLG00100018667	RBM42	99	96.017	Heterocephalus_glaber_male
ENSMICG00000009880	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	97.694	Ictidomys_tridecemlineatus
ENSMICG00000009880	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.855	Jaculus_jaculus
ENSMICG00000009880	RBM42	100	96.017	ENSLAFG00000014993	RBM42	99	96.017	Loxodonta_africana
ENSMICG00000009880	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSMICG00000009880	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSMICG00000009880	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSMICG00000009880	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSMICG00000009880	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	97.484	Microtus_ochrogaster
ENSMICG00000009880	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	82.062	Monodelphis_domestica
ENSMICG00000009880	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.904	Mus_caroli
ENSMICG00000009880	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.904	Mus_musculus
ENSMICG00000009880	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.904	Mus_pahari
ENSMICG00000009880	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.904	Mus_spretus
ENSMICG00000009880	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	97.582	Mustela_putorius_furo
ENSMICG00000009880	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.484	Myotis_lucifugus
ENSMICG00000009880	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	97.275	Nannospalax_galili
ENSMICG00000009880	RBM42	71	99.669	ENSNLEG00000011272	-	94	91.899	Nomascus_leucogenys
ENSMICG00000009880	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	81.893	Notamacropus_eugenii
ENSMICG00000009880	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	92.662	Ochotona_princeps
ENSMICG00000009880	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	98.113	Octodon_degus
ENSMICG00000009880	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	96.507	Oryctolagus_cuniculus
ENSMICG00000009880	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.904	Otolemur_garnettii
ENSMICG00000009880	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	93.067	Ovis_aries
ENSMICG00000009880	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSMICG00000009880	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSMICG00000009880	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSMICG00000009880	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSMICG00000009880	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSMICG00000009880	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	98.323	Peromyscus_maniculatus_bairdii
ENSMICG00000009880	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	82.268	Phascolarctos_cinereus
ENSMICG00000009880	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	97.732	Pongo_abelii
ENSMICG00000009880	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	85.325	Procavia_capensis
ENSMICG00000009880	RBM42	97	76.279	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSMICG00000009880	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSMICG00000009880	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.532	Pteropus_vampyrus
ENSMICG00000009880	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	98.113	Rattus_norvegicus
ENSMICG00000009880	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSMICG00000009880	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSMICG00000009880	RBM42	90	98.947	ENSSBOG00000030666	RBM42	100	99.261	Saimiri_boliviensis_boliviensis
ENSMICG00000009880	RBM42	100	87.708	ENSSARG00000010724	RBM42	100	87.708	Sorex_araneus
ENSMICG00000009880	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.872	Sus_scrofa
ENSMICG00000009880	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	98.532	Ursus_americanus
ENSMICG00000009880	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	98.532	Ursus_maritimus
ENSMICG00000009880	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.484	Vulpes_vulpes