EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000009952 (Gene tree)
Gene ID: 105861619
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 41552 bases
Position: chr16:36159522-36201073
Accession: 105861619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000028680	ResIII	PF04851.15	7.7e-07	1	1
ENSMICP00000009081	ResIII	PF04851.15	8.1e-07	1	1
ENSMICP00000029397	ResIII	PF04851.15	9.9e-07	1	1
ENSMICP00000009081	DEAD	PF00270.29	8e-50	1	1
ENSMICP00000028680	DEAD	PF00270.29	8.6e-50	1	1
ENSMICP00000029397	DEAD	PF00270.29	1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000035588	DDX42-204	483	-	ENSMICP00000028759	160 (aa)	-	UPI00085B2D4B
ENSMICT00000033762	DDX42-203	2697	-	ENSMICP00000028680	898 (aa)	-	UPI00085B093C
ENSMICT00000027792	DDX42-201	4276	XM_012747265	ENSMICP00000029397	1000 (aa)	XP_012602719	UPI00098BA1AF
ENSMICT00000009968	DDX42-202	2787	-	ENSMICP00000009081	928 (aa)	-	UPI00085B2CDD

Gene Model

Click here to download ENSMICG00000009952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000009952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000009952	DDX42	59	37.925	ENSMICG00000009267	DDX5	90	39.458
ENSMICG00000009952	DDX42	55	31.412	ENSMICG00000012110	DDX59	75	32.383
ENSMICG00000009952	DDX42	53	43.651	ENSMICG00000028626	DDX46	53	44.978
ENSMICG00000009952	DDX42	50	38.495	ENSMICG00000007919	DDX41	73	38.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000009952	DDX42	100	96.055	ENSG00000198231	DDX42	100	99.038	Homo_sapiens
ENSMICG00000009952	DDX42	91	76.235	ENSAPOG00000017675	ddx42	99	72.387	Acanthochromis_polyacanthus
ENSMICG00000009952	DDX42	100	96.474	ENSAMEG00000003200	DDX42	100	97.115	Ailuropoda_melanoleuca
ENSMICG00000009952	DDX42	84	71.266	ENSACIG00000007376	ddx42	99	72.509	Amphilophus_citrinellus
ENSMICG00000009952	DDX42	91	76.443	ENSAOCG00000003520	ddx42	99	72.287	Amphiprion_ocellaris
ENSMICG00000009952	DDX42	100	71.902	ENSAPEG00000000984	ddx42	99	72.487	Amphiprion_percula
ENSMICG00000009952	DDX42	99	71.174	ENSATEG00000022920	ddx42	99	72.508	Anabas_testudineus
ENSMICG00000009952	DDX42	100	83.827	ENSAPLG00000010544	DDX42	100	84.599	Anas_platyrhynchos
ENSMICG00000009952	DDX42	100	83.991	ENSACAG00000003994	DDX42	99	84.328	Anolis_carolinensis
ENSMICG00000009952	DDX42	100	96.878	ENSANAG00000035693	DDX42	100	96.895	Aotus_nancymaae
ENSMICG00000009952	DDX42	91	76.061	ENSACLG00000025113	ddx42	99	72.795	Astatotilapia_calliptera
ENSMICG00000009952	DDX42	81	80.978	ENSAMXG00000011435	ddx42	100	70.514	Astyanax_mexicanus
ENSMICG00000009952	DDX42	100	94.872	ENSBTAG00000021058	DDX42	100	95.299	Bos_taurus
ENSMICG00000009952	DDX42	64	52.673	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSMICG00000009952	DDX42	100	96.878	ENSCJAG00000019649	DDX42	99	98.953	Callithrix_jacchus
ENSMICG00000009952	DDX42	100	96.150	ENSCAFG00000012818	DDX42	100	96.791	Canis_familiaris
ENSMICG00000009952	DDX42	100	96.257	ENSCAFG00020026631	DDX42	100	96.898	Canis_lupus_dingo
ENSMICG00000009952	DDX42	100	95.314	ENSCHIG00000014431	DDX42	100	95.953	Capra_hircus
ENSMICG00000009952	DDX42	100	95.615	ENSTSYG00000001380	DDX42	100	96.257	Carlito_syrichta
ENSMICG00000009952	DDX42	73	75.740	ENSCAPG00000013621	DDX42	94	75.740	Cavia_aperea
ENSMICG00000009952	DDX42	100	96.133	ENSCPOG00000005633	DDX42	100	96.133	Cavia_porcellus
ENSMICG00000009952	DDX42	100	91.496	ENSCCAG00000020612	DDX42	100	96.420	Cebus_capucinus
ENSMICG00000009952	DDX42	100	96.771	ENSCATG00000030490	DDX42	100	96.802	Cercocebus_atys
ENSMICG00000009952	DDX42	100	96.992	ENSCLAG00000003497	DDX42	100	96.992	Chinchilla_lanigera
ENSMICG00000009952	DDX42	100	92.683	ENSCSAG00000003914	DDX42	100	93.319	Chlorocebus_sabaeus
ENSMICG00000009952	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSMICG00000009952	DDX42	100	83.716	ENSCPBG00000026682	DDX42	100	84.238	Chrysemys_picta_bellii
ENSMICG00000009952	DDX42	50	66.592	ENSCING00000001837	-	94	68.224	Ciona_intestinalis
ENSMICG00000009952	DDX42	100	96.878	ENSCANG00000034663	DDX42	99	98.127	Colobus_angolensis_palliatus
ENSMICG00000009952	DDX42	100	95.269	ENSCGRG00001009775	Ddx42	100	95.484	Cricetulus_griseus_chok1gshd
ENSMICG00000009952	DDX42	100	95.269	ENSCGRG00000011718	Ddx42	100	95.484	Cricetulus_griseus_crigri
ENSMICG00000009952	DDX42	91	73.908	ENSCSEG00000021574	ddx42	99	70.450	Cynoglossus_semilaevis
ENSMICG00000009952	DDX42	100	70.481	ENSCVAG00000011404	ddx42	99	71.277	Cyprinodon_variegatus
ENSMICG00000009952	DDX42	100	70.276	ENSDARG00000037928	ddx42	99	70.903	Danio_rerio
ENSMICG00000009952	DDX42	100	89.328	ENSDNOG00000007961	DDX42	100	89.968	Dasypus_novemcinctus
ENSMICG00000009952	DDX42	100	88.627	ENSDORG00000004199	Ddx42	100	88.305	Dipodomys_ordii
ENSMICG00000009952	DDX42	66	60.582	FBgn0036104	CG6418	87	56.133	Drosophila_melanogaster
ENSMICG00000009952	DDX42	80	73.210	ENSEBUG00000001155	ddx42	91	73.077	Eptatretus_burgeri
ENSMICG00000009952	DDX42	100	96.898	ENSEASG00005013089	DDX42	100	97.540	Equus_asinus_asinus
ENSMICG00000009952	DDX42	100	96.898	ENSECAG00000022684	DDX42	100	97.540	Equus_caballus
ENSMICG00000009952	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSMICG00000009952	DDX42	100	69.611	ENSELUG00000020593	ddx42	100	70.582	Esox_lucius
ENSMICG00000009952	DDX42	100	97.112	ENSFCAG00000003499	DDX42	100	97.754	Felis_catus
ENSMICG00000009952	DDX42	94	85.955	ENSFALG00000004675	DDX42	78	85.955	Ficedula_albicollis
ENSMICG00000009952	DDX42	100	96.781	ENSFDAG00000020516	DDX42	100	96.781	Fukomys_damarensis
ENSMICG00000009952	DDX42	100	68.882	ENSFHEG00000023290	ddx42	99	71.246	Fundulus_heteroclitus
ENSMICG00000009952	DDX42	76	77.997	ENSGMOG00000004595	ddx42	88	77.997	Gadus_morhua
ENSMICG00000009952	DDX42	100	82.316	ENSGALG00000000581	DDX42	100	82.627	Gallus_gallus
ENSMICG00000009952	DDX42	91	74.468	ENSGAFG00000011846	ddx42	96	72.808	Gambusia_affinis
ENSMICG00000009952	DDX42	99	67.519	ENSGACG00000009782	ddx42	100	68.191	Gasterosteus_aculeatus
ENSMICG00000009952	DDX42	100	83.368	ENSGAGG00000024411	DDX42	99	83.891	Gopherus_agassizii
ENSMICG00000009952	DDX42	100	96.663	ENSGGOG00000006779	DDX42	100	96.695	Gorilla_gorilla
ENSMICG00000009952	DDX42	91	76.297	ENSHBUG00000008705	ddx42	99	73.007	Haplochromis_burtoni
ENSMICG00000009952	DDX42	100	92.258	ENSHGLG00000010024	DDX42	100	92.258	Heterocephalus_glaber_female
ENSMICG00000009952	DDX42	94	73.938	ENSHGLG00100007138	-	95	73.938	Heterocephalus_glaber_male
ENSMICG00000009952	DDX42	100	95.936	ENSHGLG00100004479	-	100	96.578	Heterocephalus_glaber_male
ENSMICG00000009952	DDX42	84	78.149	ENSHCOG00000003357	ddx42	97	75.458	Hippocampus_comes
ENSMICG00000009952	DDX42	80	79.630	ENSIPUG00000013327	ddx42	100	70.807	Ictalurus_punctatus
ENSMICG00000009952	DDX42	100	97.425	ENSSTOG00000008922	DDX42	100	97.439	Ictidomys_tridecemlineatus
ENSMICG00000009952	DDX42	100	95.914	ENSJJAG00000011727	Ddx42	100	95.914	Jaculus_jaculus
ENSMICG00000009952	DDX42	99	69.905	ENSKMAG00000009914	ddx42	99	71.911	Kryptolebias_marmoratus
ENSMICG00000009952	DDX42	81	76.562	ENSLBEG00000004687	ddx42	100	66.458	Labrus_bergylta
ENSMICG00000009952	DDX42	99	75.970	ENSLACG00000013476	DDX42	97	78.172	Latimeria_chalumnae
ENSMICG00000009952	DDX42	100	74.516	ENSLOCG00000011764	ddx42	100	74.758	Lepisosteus_oculatus
ENSMICG00000009952	DDX42	100	96.150	ENSLAFG00000003249	DDX42	100	96.791	Loxodonta_africana
ENSMICG00000009952	DDX42	100	96.771	ENSMFAG00000031356	DDX42	100	96.802	Macaca_fascicularis
ENSMICG00000009952	DDX42	100	96.785	ENSMMUG00000016762	DDX42	100	96.785	Macaca_mulatta
ENSMICG00000009952	DDX42	100	96.771	ENSMNEG00000038250	DDX42	100	96.802	Macaca_nemestrina
ENSMICG00000009952	DDX42	100	96.269	ENSMLEG00000043080	DDX42	100	96.908	Mandrillus_leucophaeus
ENSMICG00000009952	DDX42	91	76.950	ENSMAMG00000021888	ddx42	98	72.804	Mastacembelus_armatus
ENSMICG00000009952	DDX42	91	76.061	ENSMZEG00005023103	ddx42	99	72.795	Maylandia_zebra
ENSMICG00000009952	DDX42	100	82.730	ENSMGAG00000001822	DDX42	100	82.937	Meleagris_gallopavo
ENSMICG00000009952	DDX42	76	96.875	ENSMAUG00000020774	-	94	96.875	Mesocricetus_auratus
ENSMICG00000009952	DDX42	100	94.409	ENSMOCG00000015504	Ddx42	100	94.409	Microtus_ochrogaster
ENSMICG00000009952	DDX42	90	72.176	ENSMMOG00000016963	ddx42	87	71.134	Mola_mola
ENSMICG00000009952	DDX42	50	97.645	ENSMODG00000009917	-	98	97.645	Monodelphis_domestica
ENSMICG00000009952	DDX42	99	71.322	ENSMALG00000007800	ddx42	99	72.234	Monopterus_albus
ENSMICG00000009952	DDX42	100	96.237	MGP_CAROLIEiJ_G0017314	Ddx42	100	96.237	Mus_caroli
ENSMICG00000009952	DDX42	100	96.237	ENSMUSG00000020705	Ddx42	100	96.237	Mus_musculus
ENSMICG00000009952	DDX42	76	99.255	MGP_PahariEiJ_G0018444	-	100	99.255	Mus_pahari
ENSMICG00000009952	DDX42	100	96.237	MGP_SPRETEiJ_G0018158	Ddx42	100	96.237	Mus_spretus
ENSMICG00000009952	DDX42	100	96.281	ENSMPUG00000014921	DDX42	100	96.918	Mustela_putorius_furo
ENSMICG00000009952	DDX42	100	94.942	ENSMLUG00000011645	DDX42	100	95.574	Myotis_lucifugus
ENSMICG00000009952	DDX42	100	95.914	ENSNGAG00000021897	Ddx42	100	95.914	Nannospalax_galili
ENSMICG00000009952	DDX42	91	74.646	ENSNBRG00000004466	ddx42	99	71.520	Neolamprologus_brichardi
ENSMICG00000009952	DDX42	100	96.771	ENSNLEG00000004248	DDX42	99	97.986	Nomascus_leucogenys
ENSMICG00000009952	DDX42	74	82.788	ENSMEUG00000013227	-	85	82.788	Notamacropus_eugenii
ENSMICG00000009952	DDX42	100	94.670	ENSOPRG00000014960	DDX42	100	95.203	Ochotona_princeps
ENSMICG00000009952	DDX42	100	93.233	ENSODEG00000007810	DDX42	100	93.233	Octodon_degus
ENSMICG00000009952	DDX42	91	75.943	ENSONIG00000000734	ddx42	99	72.901	Oreochromis_niloticus
ENSMICG00000009952	DDX42	58	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSMICG00000009952	DDX42	95	95.735	ENSOCUG00000004304	DDX42	88	96.296	Oryctolagus_cuniculus
ENSMICG00000009952	DDX42	100	70.927	ENSORLG00000002395	ddx42	100	70.406	Oryzias_latipes
ENSMICG00000009952	DDX42	100	71.064	ENSORLG00020011621	ddx42	100	72.021	Oryzias_latipes_hni
ENSMICG00000009952	DDX42	100	70.594	ENSORLG00015004487	ddx42	100	71.809	Oryzias_latipes_hsok
ENSMICG00000009952	DDX42	100	70.021	ENSOMEG00000020093	ddx42	100	71.113	Oryzias_melastigma
ENSMICG00000009952	DDX42	100	97.012	ENSOGAG00000006872	DDX42	100	97.652	Otolemur_garnettii
ENSMICG00000009952	DDX42	100	94.093	ENSOARG00000013540	DDX42	100	95.148	Ovis_aries
ENSMICG00000009952	DDX42	100	96.878	ENSPPAG00000007496	DDX42	100	96.908	Pan_paniscus
ENSMICG00000009952	DDX42	100	96.898	ENSPPRG00000002740	DDX42	100	97.540	Panthera_pardus
ENSMICG00000009952	DDX42	100	96.791	ENSPTIG00000009932	DDX42	100	97.433	Panthera_tigris_altaica
ENSMICG00000009952	DDX42	100	96.878	ENSPTRG00000009523	DDX42	100	96.908	Pan_troglodytes
ENSMICG00000009952	DDX42	100	96.771	ENSPANG00000020990	DDX42	100	96.802	Papio_anubis
ENSMICG00000009952	DDX42	100	70.021	ENSPKIG00000002901	ddx42	100	70.343	Paramormyrops_kingsleyae
ENSMICG00000009952	DDX42	86	91.553	ENSPSIG00000010289	DDX42	98	91.256	Pelodiscus_sinensis
ENSMICG00000009952	DDX42	100	66.702	ENSPMGG00000009323	ddx42	100	68.684	Periophthalmus_magnuspinnatus
ENSMICG00000009952	DDX42	100	95.489	ENSPEMG00000006755	Ddx42	100	95.704	Peromyscus_maniculatus_bairdii
ENSMICG00000009952	DDX42	80	72.441	ENSPMAG00000005580	ddx42	100	72.966	Petromyzon_marinus
ENSMICG00000009952	DDX42	100	91.208	ENSPCIG00000009093	DDX42	100	91.429	Phascolarctos_cinereus
ENSMICG00000009952	DDX42	100	68.486	ENSPFOG00000014104	ddx42	100	70.921	Poecilia_formosa
ENSMICG00000009952	DDX42	100	68.486	ENSPLAG00000010522	ddx42	100	70.921	Poecilia_latipinna
ENSMICG00000009952	DDX42	100	68.802	ENSPMEG00000010744	ddx42	100	71.249	Poecilia_mexicana
ENSMICG00000009952	DDX42	100	68.627	ENSPREG00000009926	ddx42	100	70.864	Poecilia_reticulata
ENSMICG00000009952	DDX42	100	93.949	ENSPPYG00000008531	DDX42	100	94.586	Pongo_abelii
ENSMICG00000009952	DDX42	92	89.895	ENSPCAG00000002474	DDX42	100	90.592	Procavia_capensis
ENSMICG00000009952	DDX42	100	88.972	ENSPCOG00000001559	DDX42	100	89.615	Propithecus_coquereli
ENSMICG00000009952	DDX42	100	92.201	ENSPVAG00000000160	DDX42	100	92.842	Pteropus_vampyrus
ENSMICG00000009952	DDX42	75	73.759	ENSPNYG00000013954	ddx42	97	70.138	Pundamilia_nyererei
ENSMICG00000009952	DDX42	78	80.628	ENSPNAG00000017352	ddx42	99	69.896	Pygocentrus_nattereri
ENSMICG00000009952	DDX42	100	95.806	ENSRNOG00000009474	Ddx42	100	96.022	Rattus_norvegicus
ENSMICG00000009952	DDX42	100	96.663	ENSRBIG00000004781	DDX42	99	97.983	Rhinopithecus_bieti
ENSMICG00000009952	DDX42	100	96.771	ENSRROG00000029794	DDX42	100	96.802	Rhinopithecus_roxellana
ENSMICG00000009952	DDX42	100	96.878	ENSSBOG00000029624	DDX42	100	96.895	Saimiri_boliviensis_boliviensis
ENSMICG00000009952	DDX42	74	61.276	ENSSHAG00000007919	-	99	60.714	Sarcophilus_harrisii
ENSMICG00000009952	DDX42	100	91.419	ENSSHAG00000012896	-	100	91.640	Sarcophilus_harrisii
ENSMICG00000009952	DDX42	83	80.829	ENSSFOG00015014064	ddx42	82	81.039	Scleropages_formosus
ENSMICG00000009952	DDX42	99	71.413	ENSSMAG00000009077	ddx42	99	72.208	Scophthalmus_maximus
ENSMICG00000009952	DDX42	99	71.564	ENSSDUG00000022221	ddx42	99	72.135	Seriola_dumerili
ENSMICG00000009952	DDX42	99	71.398	ENSSLDG00000018483	ddx42	100	71.067	Seriola_lalandi_dorsalis
ENSMICG00000009952	DDX42	100	95.508	ENSSARG00000009847	DDX42	100	96.150	Sorex_araneus
ENSMICG00000009952	DDX42	100	84.194	ENSSPUG00000018806	DDX42	100	84.194	Sphenodon_punctatus
ENSMICG00000009952	DDX42	91	76.471	ENSSPAG00000013055	ddx42	99	72.359	Stegastes_partitus
ENSMICG00000009952	DDX42	85	94.417	ENSSSCG00000017289	DDX42	97	95.658	Sus_scrofa
ENSMICG00000009952	DDX42	100	83.298	ENSTGUG00000001931	DDX42	100	83.403	Taeniopygia_guttata
ENSMICG00000009952	DDX42	99	70.117	ENSTRUG00000010711	ddx42	99	81.111	Takifugu_rubripes
ENSMICG00000009952	DDX42	82	93.553	ENSTBEG00000010159	DDX42	99	93.553	Tupaia_belangeri
ENSMICG00000009952	DDX42	100	96.368	ENSTTRG00000006962	DDX42	100	97.009	Tursiops_truncatus
ENSMICG00000009952	DDX42	100	96.474	ENSUAMG00000007321	DDX42	100	97.115	Ursus_americanus
ENSMICG00000009952	DDX42	100	95.620	ENSUMAG00000017438	DDX42	100	96.261	Ursus_maritimus
ENSMICG00000009952	DDX42	93	99.324	ENSVPAG00000009633	DDX42	90	99.324	Vicugna_pacos
ENSMICG00000009952	DDX42	100	96.471	ENSVVUG00000006095	DDX42	100	97.112	Vulpes_vulpes
ENSMICG00000009952	DDX42	100	75.996	ENSXETG00000003245	ddx42	100	75.996	Xenopus_tropicalis
ENSMICG00000009952	DDX42	84	70.648	ENSXCOG00000017560	ddx42	97	71.000	Xiphophorus_couchianus
ENSMICG00000009952	DDX42	100	70.199	ENSXMAG00000008138	ddx42	100	71.520	Xiphophorus_maculatus