EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000010038 (Gene tree)
Gene ID: 105870925
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 22021 bases
Position: chr21:16636283-16658303
Accession: 105870925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000009146	PRP21_like_P	PF12230.8	1.1e-51	1	1
ENSMICP00000009146	Surp	PF01805.20	8.7e-46	1	2
ENSMICP00000009146	Surp	PF01805.20	8.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000010040	SF3A1-201	2929	XM_012763900	ENSMICP00000009146	792 (aa)	XP_012619354	UPI0001773475

Gene Model

Click here to download ENSMICG00000010038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000010038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000010038	SF3A1	100	99.117	ENSG00000099995	SF3A1	100	99.117	Homo_sapiens
ENSMICG00000010038	SF3A1	100	82.516	ENSAPOG00000020465	sf3a1	99	84.910	Acanthochromis_polyacanthus
ENSMICG00000010038	SF3A1	100	98.491	ENSAMEG00000007737	SF3A1	100	98.491	Ailuropoda_melanoleuca
ENSMICG00000010038	SF3A1	100	83.522	ENSACIG00000020672	sf3a1	99	85.038	Amphilophus_citrinellus
ENSMICG00000010038	SF3A1	100	82.250	ENSAOCG00000003060	sf3a1	99	84.910	Amphiprion_ocellaris
ENSMICG00000010038	SF3A1	100	82.375	ENSAPEG00000010735	sf3a1	99	85.038	Amphiprion_percula
ENSMICG00000010038	SF3A1	96	85.026	ENSATEG00000021201	sf3a1	98	85.347	Anabas_testudineus
ENSMICG00000010038	SF3A1	95	94.055	ENSAPLG00000009057	SF3A1	99	93.032	Anas_platyrhynchos
ENSMICG00000010038	SF3A1	100	85.468	ENSACAG00000009415	SF3A1	100	86.700	Anolis_carolinensis
ENSMICG00000010038	SF3A1	100	99.243	ENSANAG00000032045	SF3A1	100	99.243	Aotus_nancymaae
ENSMICG00000010038	SF3A1	100	84.355	ENSACLG00000012622	sf3a1	99	85.531	Astatotilapia_calliptera
ENSMICG00000010038	SF3A1	99	82.554	ENSAMXG00000005382	sf3a1	99	84.170	Astyanax_mexicanus
ENSMICG00000010038	SF3A1	100	98.991	ENSBTAG00000003390	SF3A1	100	98.991	Bos_taurus
ENSMICG00000010038	SF3A1	84	43.649	WBGene00004188	prp-21	94	43.863	Caenorhabditis_elegans
ENSMICG00000010038	SF3A1	100	99.117	ENSCJAG00000010370	SF3A1	100	99.117	Callithrix_jacchus
ENSMICG00000010038	SF3A1	100	98.991	ENSCAFG00000012559	SF3A1	100	98.991	Canis_familiaris
ENSMICG00000010038	SF3A1	100	98.991	ENSCAFG00020000838	SF3A1	100	98.991	Canis_lupus_dingo
ENSMICG00000010038	SF3A1	100	98.865	ENSCHIG00000018642	SF3A1	100	98.865	Capra_hircus
ENSMICG00000010038	SF3A1	100	99.117	ENSTSYG00000004739	SF3A1	100	99.117	Carlito_syrichta
ENSMICG00000010038	SF3A1	94	80.908	ENSCAPG00000015414	SF3A1	98	80.908	Cavia_aperea
ENSMICG00000010038	SF3A1	100	98.613	ENSCPOG00000014589	SF3A1	100	98.613	Cavia_porcellus
ENSMICG00000010038	SF3A1	100	99.243	ENSCCAG00000032006	SF3A1	100	99.243	Cebus_capucinus
ENSMICG00000010038	SF3A1	100	99.496	ENSCATG00000029241	SF3A1	100	99.496	Cercocebus_atys
ENSMICG00000010038	SF3A1	100	98.235	ENSCLAG00000006508	SF3A1	100	98.235	Chinchilla_lanigera
ENSMICG00000010038	SF3A1	100	99.369	ENSCSAG00000009470	SF3A1	100	99.369	Chlorocebus_sabaeus
ENSMICG00000010038	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSMICG00000010038	SF3A1	100	90.680	ENSCPBG00000007595	SF3A1	100	90.806	Chrysemys_picta_bellii
ENSMICG00000010038	SF3A1	94	52.381	ENSCING00000008526	-	66	57.495	Ciona_intestinalis
ENSMICG00000010038	SF3A1	96	51.680	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSMICG00000010038	SF3A1	100	99.369	ENSCANG00000033564	SF3A1	100	99.369	Colobus_angolensis_palliatus
ENSMICG00000010038	SF3A1	100	98.361	ENSCGRG00001008933	Sf3a1	100	98.361	Cricetulus_griseus_chok1gshd
ENSMICG00000010038	SF3A1	100	98.361	ENSCGRG00000006127	Sf3a1	100	98.361	Cricetulus_griseus_crigri
ENSMICG00000010038	SF3A1	100	81.533	ENSCSEG00000010792	sf3a1	99	81.923	Cynoglossus_semilaevis
ENSMICG00000010038	SF3A1	100	83.145	ENSCVAG00000004560	sf3a1	98	84.375	Cyprinodon_variegatus
ENSMICG00000010038	SF3A1	100	81.658	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSMICG00000010038	SF3A1	100	98.616	ENSDNOG00000010629	SF3A1	100	98.616	Dasypus_novemcinctus
ENSMICG00000010038	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSMICG00000010038	SF3A1	83	60.494	FBgn0266917	Sf3a1	85	59.386	Drosophila_melanogaster
ENSMICG00000010038	SF3A1	84	96.856	ENSETEG00000017194	SF3A1	100	94.729	Echinops_telfairi
ENSMICG00000010038	SF3A1	98	65.981	ENSEBUG00000001285	sf3a1	96	66.955	Eptatretus_burgeri
ENSMICG00000010038	SF3A1	100	99.117	ENSEASG00005010254	SF3A1	100	99.117	Equus_asinus_asinus
ENSMICG00000010038	SF3A1	100	99.117	ENSECAG00000023962	SF3A1	100	99.117	Equus_caballus
ENSMICG00000010038	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSMICG00000010038	SF3A1	100	81.932	ENSELUG00000022578	sf3a1	98	82.285	Esox_lucius
ENSMICG00000010038	SF3A1	100	98.739	ENSFCAG00000011932	SF3A1	100	98.739	Felis_catus
ENSMICG00000010038	SF3A1	95	92.989	ENSFALG00000006944	SF3A1	100	91.688	Ficedula_albicollis
ENSMICG00000010038	SF3A1	100	98.739	ENSFDAG00000009560	SF3A1	100	98.739	Fukomys_damarensis
ENSMICG00000010038	SF3A1	100	84.025	ENSFHEG00000010866	sf3a1	98	85.286	Fundulus_heteroclitus
ENSMICG00000010038	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSMICG00000010038	SF3A1	95	94.312	ENSGALG00000007937	SF3A1	100	92.443	Gallus_gallus
ENSMICG00000010038	SF3A1	100	83.270	ENSGAFG00000009111	sf3a1	97	84.967	Gambusia_affinis
ENSMICG00000010038	SF3A1	100	81.486	ENSGACG00000011893	sf3a1	97	83.377	Gasterosteus_aculeatus
ENSMICG00000010038	SF3A1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSMICG00000010038	SF3A1	100	99.117	ENSGGOG00000012631	SF3A1	100	99.117	Gorilla_gorilla
ENSMICG00000010038	SF3A1	100	84.355	ENSHBUG00000015795	sf3a1	99	85.531	Haplochromis_burtoni
ENSMICG00000010038	SF3A1	100	98.739	ENSHGLG00000007907	SF3A1	100	98.739	Heterocephalus_glaber_female
ENSMICG00000010038	SF3A1	100	98.739	ENSHGLG00100013799	SF3A1	100	98.739	Heterocephalus_glaber_male
ENSMICG00000010038	SF3A1	100	80.377	ENSHCOG00000015423	sf3a1	99	80.903	Hippocampus_comes
ENSMICG00000010038	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSMICG00000010038	SF3A1	100	98.865	ENSSTOG00000013892	SF3A1	100	98.865	Ictidomys_tridecemlineatus
ENSMICG00000010038	SF3A1	100	98.615	ENSJJAG00000022566	Sf3a1	100	98.615	Jaculus_jaculus
ENSMICG00000010038	SF3A1	100	82.516	ENSKMAG00000002400	sf3a1	98	84.505	Kryptolebias_marmoratus
ENSMICG00000010038	SF3A1	100	81.030	ENSLBEG00000022974	sf3a1	99	83.376	Labrus_bergylta
ENSMICG00000010038	SF3A1	100	86.935	ENSLACG00000003565	SF3A1	97	88.136	Latimeria_chalumnae
ENSMICG00000010038	SF3A1	100	84.837	ENSLOCG00000008251	sf3a1	97	86.623	Lepisosteus_oculatus
ENSMICG00000010038	SF3A1	100	99.117	ENSLAFG00000000448	SF3A1	100	99.117	Loxodonta_africana
ENSMICG00000010038	SF3A1	98	62.293	ENSLAFG00000026032	-	98	62.038	Loxodonta_africana
ENSMICG00000010038	SF3A1	100	99.243	ENSMFAG00000031979	SF3A1	100	99.243	Macaca_fascicularis
ENSMICG00000010038	SF3A1	100	99.243	ENSMMUG00000005547	SF3A1	100	99.243	Macaca_mulatta
ENSMICG00000010038	SF3A1	100	99.117	ENSMNEG00000037229	SF3A1	100	99.117	Macaca_nemestrina
ENSMICG00000010038	SF3A1	100	99.369	ENSMLEG00000041908	SF3A1	100	99.369	Mandrillus_leucophaeus
ENSMICG00000010038	SF3A1	97	85.511	ENSMAMG00000006460	sf3a1	97	85.899	Mastacembelus_armatus
ENSMICG00000010038	SF3A1	100	84.355	ENSMZEG00005009633	sf3a1	99	85.531	Maylandia_zebra
ENSMICG00000010038	SF3A1	95	94.312	ENSMGAG00000001330	SF3A1	99	93.411	Meleagris_gallopavo
ENSMICG00000010038	SF3A1	92	94.672	ENSMAUG00000020317	Sf3a1	94	94.672	Mesocricetus_auratus
ENSMICG00000010038	SF3A1	100	98.361	ENSMOCG00000008438	Sf3a1	100	98.361	Microtus_ochrogaster
ENSMICG00000010038	SF3A1	100	81.509	ENSMMOG00000015588	sf3a1	98	82.111	Mola_mola
ENSMICG00000010038	SF3A1	100	97.604	ENSMODG00000009270	SF3A1	100	97.604	Monodelphis_domestica
ENSMICG00000010038	SF3A1	100	84.257	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSMICG00000010038	SF3A1	100	97.982	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.982	Mus_caroli
ENSMICG00000010038	SF3A1	100	97.982	ENSMUSG00000002129	Sf3a1	100	97.982	Mus_musculus
ENSMICG00000010038	SF3A1	100	97.856	MGP_PahariEiJ_G0016862	Sf3a1	100	97.856	Mus_pahari
ENSMICG00000010038	SF3A1	100	97.982	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.982	Mus_spretus
ENSMICG00000010038	SF3A1	100	98.991	ENSMPUG00000013144	SF3A1	100	98.991	Mustela_putorius_furo
ENSMICG00000010038	SF3A1	100	98.865	ENSMLUG00000002139	SF3A1	100	98.865	Myotis_lucifugus
ENSMICG00000010038	SF3A1	100	98.613	ENSNGAG00000016977	Sf3a1	100	98.613	Nannospalax_galili
ENSMICG00000010038	SF3A1	100	83.770	ENSNBRG00000016642	sf3a1	96	86.957	Neolamprologus_brichardi
ENSMICG00000010038	SF3A1	100	99.369	ENSNLEG00000003686	SF3A1	100	99.369	Nomascus_leucogenys
ENSMICG00000010038	SF3A1	96	87.895	ENSMEUG00000008741	SF3A1	100	87.895	Notamacropus_eugenii
ENSMICG00000010038	SF3A1	100	98.361	ENSOPRG00000016636	SF3A1	100	98.361	Ochotona_princeps
ENSMICG00000010038	SF3A1	100	98.865	ENSODEG00000002571	SF3A1	100	98.865	Octodon_degus
ENSMICG00000010038	SF3A1	100	83.750	ENSONIG00000010848	sf3a1	99	84.910	Oreochromis_niloticus
ENSMICG00000010038	SF3A1	100	98.739	ENSOCUG00000007633	SF3A1	100	98.739	Oryctolagus_cuniculus
ENSMICG00000010038	SF3A1	96	81.759	ENSORLG00000013050	sf3a1	99	83.445	Oryzias_latipes
ENSMICG00000010038	SF3A1	99	79.620	ENSORLG00020003236	sf3a1	94	83.578	Oryzias_latipes_hni
ENSMICG00000010038	SF3A1	100	82.138	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSMICG00000010038	SF3A1	100	82.516	ENSOMEG00000013362	sf3a1	99	83.613	Oryzias_melastigma
ENSMICG00000010038	SF3A1	100	99.243	ENSOGAG00000012931	SF3A1	100	99.243	Otolemur_garnettii
ENSMICG00000010038	SF3A1	100	97.100	ENSOARG00000006849	SF3A1	100	97.100	Ovis_aries
ENSMICG00000010038	SF3A1	100	98.108	ENSPPAG00000041790	SF3A1	100	98.108	Pan_paniscus
ENSMICG00000010038	SF3A1	100	98.739	ENSPPRG00000004391	SF3A1	100	98.739	Panthera_pardus
ENSMICG00000010038	SF3A1	97	98.705	ENSPTIG00000000844	SF3A1	100	98.705	Panthera_tigris_altaica
ENSMICG00000010038	SF3A1	100	99.117	ENSPTRG00000014240	SF3A1	100	99.117	Pan_troglodytes
ENSMICG00000010038	SF3A1	100	99.369	ENSPANG00000020772	SF3A1	100	99.369	Papio_anubis
ENSMICG00000010038	SF3A1	83	93.407	ENSPSIG00000012803	SF3A1	96	93.785	Pelodiscus_sinensis
ENSMICG00000010038	SF3A1	96	84.162	ENSPMGG00000023096	sf3a1	100	83.901	Periophthalmus_magnuspinnatus
ENSMICG00000010038	SF3A1	100	98.487	ENSPEMG00000009494	Sf3a1	100	98.487	Peromyscus_maniculatus_bairdii
ENSMICG00000010038	SF3A1	69	78.182	ENSPMAG00000007139	-	90	77.903	Petromyzon_marinus
ENSMICG00000010038	SF3A1	100	97.478	ENSPCIG00000022692	SF3A1	100	97.478	Phascolarctos_cinereus
ENSMICG00000010038	SF3A1	100	75.377	ENSPFOG00000016768	sf3a1	93	79.048	Poecilia_formosa
ENSMICG00000010038	SF3A1	100	83.668	ENSPLAG00000017268	sf3a1	97	85.229	Poecilia_latipinna
ENSMICG00000010038	SF3A1	84	86.145	ENSPMEG00000019811	sf3a1	98	85.392	Poecilia_mexicana
ENSMICG00000010038	SF3A1	100	83.794	ENSPREG00000010347	sf3a1	97	85.621	Poecilia_reticulata
ENSMICG00000010038	SF3A1	100	99.369	ENSPPYG00000011707	SF3A1	100	99.369	Pongo_abelii
ENSMICG00000010038	SF3A1	57	100.000	ENSPCAG00000003266	SF3A1	57	100.000	Procavia_capensis
ENSMICG00000010038	SF3A1	100	99.747	ENSPCOG00000026630	SF3A1	100	99.747	Propithecus_coquereli
ENSMICG00000010038	SF3A1	100	94.451	ENSPVAG00000017719	SF3A1	94	97.852	Pteropus_vampyrus
ENSMICG00000010038	SF3A1	100	84.355	ENSPNYG00000018706	sf3a1	99	85.531	Pundamilia_nyererei
ENSMICG00000010038	SF3A1	97	84.596	ENSPNAG00000003721	sf3a1	99	84.467	Pygocentrus_nattereri
ENSMICG00000010038	SF3A1	100	97.982	ENSRNOG00000005218	Sf3a1	100	97.982	Rattus_norvegicus
ENSMICG00000010038	SF3A1	100	99.243	ENSRBIG00000032167	SF3A1	100	99.243	Rhinopithecus_bieti
ENSMICG00000010038	SF3A1	100	99.243	ENSRROG00000044908	SF3A1	100	99.243	Rhinopithecus_roxellana
ENSMICG00000010038	SF3A1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSMICG00000010038	SF3A1	99	93.291	ENSSHAG00000003666	SF3A1	98	94.955	Sarcophilus_harrisii
ENSMICG00000010038	SF3A1	100	83.375	ENSSFOG00015004579	sf3a1	99	85.128	Scleropages_formosus
ENSMICG00000010038	SF3A1	100	81.006	ENSSMAG00000004275	sf3a1	97	83.137	Scophthalmus_maximus
ENSMICG00000010038	SF3A1	100	84.025	ENSSDUG00000022219	sf3a1	99	84.783	Seriola_dumerili
ENSMICG00000010038	SF3A1	100	84.025	ENSSLDG00000012642	sf3a1	99	84.783	Seriola_lalandi_dorsalis
ENSMICG00000010038	SF3A1	97	95.596	ENSSARG00000005960	SF3A1	100	95.596	Sorex_araneus
ENSMICG00000010038	SF3A1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.542	Sphenodon_punctatus
ENSMICG00000010038	SF3A1	100	83.774	ENSSPAG00000011856	sf3a1	99	84.910	Stegastes_partitus
ENSMICG00000010038	SF3A1	100	98.865	ENSSSCG00000010002	SF3A1	100	98.865	Sus_scrofa
ENSMICG00000010038	SF3A1	95	93.931	ENSTGUG00000010547	SF3A1	99	93.385	Taeniopygia_guttata
ENSMICG00000010038	SF3A1	100	81.612	ENSTRUG00000006118	sf3a1	97	82.461	Takifugu_rubripes
ENSMICG00000010038	SF3A1	64	81.784	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSMICG00000010038	SF3A1	100	91.551	ENSTBEG00000012771	SF3A1	100	91.551	Tupaia_belangeri
ENSMICG00000010038	SF3A1	100	98.866	ENSTTRG00000001535	SF3A1	100	98.866	Tursiops_truncatus
ENSMICG00000010038	SF3A1	99	97.967	ENSUAMG00000006750	SF3A1	99	97.967	Ursus_americanus
ENSMICG00000010038	SF3A1	99	98.214	ENSUMAG00000016665	SF3A1	99	98.214	Ursus_maritimus
ENSMICG00000010038	SF3A1	100	98.991	ENSVVUG00000003075	SF3A1	100	98.991	Vulpes_vulpes
ENSMICG00000010038	SF3A1	100	85.947	ENSXETG00000016144	sf3a1	100	85.571	Xenopus_tropicalis
ENSMICG00000010038	SF3A1	100	83.019	ENSXCOG00000015653	sf3a1	97	84.706	Xiphophorus_couchianus
ENSMICG00000010038	SF3A1	100	83.145	ENSXMAG00000002753	sf3a1	97	84.837	Xiphophorus_maculatus