EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000010326 (Gene tree)
Gene ID: 105885593
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 15547 bases
Position: chr24:5608984-5624530
Accession: 105885593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000031505	RRM_1	PF00076.22	1.9e-28	1	2
ENSMICP00000031505	RRM_1	PF00076.22	1.9e-28	2	2
ENSMICP00000017993	RRM_1	PF00076.22	2.1e-28	1	2
ENSMICP00000017993	RRM_1	PF00076.22	2.1e-28	2	2
ENSMICP00000026077	RRM_1	PF00076.22	2.3e-28	1	2
ENSMICP00000026077	RRM_1	PF00076.22	2.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000029912	RAVER1-201	3208	XM_012790660	ENSMICP00000026077	736 (aa)	XP_012646114	UPI000642B843
ENSMICT00000043267	RAVER1-203	2106	-	ENSMICP00000031505	701 (aa)	-	UPI000C2EA4AD
ENSMICT00000044336	RAVER1-202	3492	-	ENSMICP00000017993	719 (aa)	-	UPI00085AFA20

Gene Model

Click here to download ENSMICG00000010326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000010326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000010326	RAVER1	72	44.948	ENSMICG00000029259	RAVER2	83	44.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000010326	RAVER1	99	92.053	ENSG00000161847	RAVER1	93	98.876	Homo_sapiens
ENSMICG00000010326	RAVER1	71	58.929	ENSAPOG00000017267	raver1	85	51.282	Acanthochromis_polyacanthus
ENSMICG00000010326	RAVER1	99	89.828	ENSAMEG00000011738	RAVER1	99	89.960	Ailuropoda_melanoleuca
ENSMICG00000010326	RAVER1	80	58.300	ENSAOCG00000005128	raver1	89	51.055	Amphiprion_ocellaris
ENSMICG00000010326	RAVER1	77	75.000	ENSAPEG00000010854	raver1	81	78.431	Amphiprion_percula
ENSMICG00000010326	RAVER1	99	52.301	ENSATEG00000021004	raver1	94	51.883	Anabas_testudineus
ENSMICG00000010326	RAVER1	83	62.500	ENSACAG00000008386	-	94	60.769	Anolis_carolinensis
ENSMICG00000010326	RAVER1	99	90.212	ENSANAG00000028226	RAVER1	99	90.873	Aotus_nancymaae
ENSMICG00000010326	RAVER1	96	51.739	ENSACLG00000018492	raver1	91	52.450	Astatotilapia_calliptera
ENSMICG00000010326	RAVER1	99	52.624	ENSAMXG00000005132	raver1	97	50.875	Astyanax_mexicanus
ENSMICG00000010326	RAVER1	99	94.571	ENSBTAG00000015721	RAVER1	99	95.444	Bos_taurus
ENSMICG00000010326	RAVER1	99	90.528	ENSCJAG00000005671	RAVER1	99	91.138	Callithrix_jacchus
ENSMICG00000010326	RAVER1	99	94.558	ENSCAFG00000017861	RAVER1	99	94.694	Canis_familiaris
ENSMICG00000010326	RAVER1	99	94.429	ENSCAFG00020024449	RAVER1	99	94.568	Canis_lupus_dingo
ENSMICG00000010326	RAVER1	99	87.973	ENSCHIG00000006718	RAVER1	99	88.243	Capra_hircus
ENSMICG00000010326	RAVER1	91	90.723	ENSTSYG00000027107	RAVER1	99	90.723	Carlito_syrichta
ENSMICG00000010326	RAVER1	90	86.486	ENSCAPG00000002269	RAVER1	99	85.886	Cavia_aperea
ENSMICG00000010326	RAVER1	99	87.989	ENSCPOG00000001008	RAVER1	99	88.092	Cavia_porcellus
ENSMICG00000010326	RAVER1	99	90.464	ENSCCAG00000031723	RAVER1	99	90.728	Cebus_capucinus
ENSMICG00000010326	RAVER1	99	92.318	ENSCATG00000043863	RAVER1	99	92.185	Cercocebus_atys
ENSMICG00000010326	RAVER1	99	89.339	ENSCLAG00000009336	RAVER1	99	89.339	Chinchilla_lanigera
ENSMICG00000010326	RAVER1	99	92.318	ENSCSAG00000007317	RAVER1	85	92.053	Chlorocebus_sabaeus
ENSMICG00000010326	RAVER1	96	64.872	ENSCPBG00000005349	-	96	63.930	Chrysemys_picta_bellii
ENSMICG00000010326	RAVER1	99	92.185	ENSCANG00000008337	RAVER1	99	91.921	Colobus_angolensis_palliatus
ENSMICG00000010326	RAVER1	99	88.259	ENSCGRG00001013260	-	99	88.259	Cricetulus_griseus_chok1gshd
ENSMICG00000010326	RAVER1	99	88.259	ENSCGRG00000015138	-	99	88.259	Cricetulus_griseus_crigri
ENSMICG00000010326	RAVER1	85	78.431	ENSCSEG00000021092	raver1	78	78.431	Cynoglossus_semilaevis
ENSMICG00000010326	RAVER1	97	52.199	ENSCVAG00000013971	raver1	92	51.206	Cyprinodon_variegatus
ENSMICG00000010326	RAVER1	96	53.431	ENSDARG00000052617	raver1	91	52.374	Danio_rerio
ENSMICG00000010326	RAVER1	74	93.878	ENSDNOG00000035742	-	76	93.878	Dasypus_novemcinctus
ENSMICG00000010326	RAVER1	99	82.470	ENSDORG00000010106	-	99	81.806	Dipodomys_ordii
ENSMICG00000010326	RAVER1	68	89.231	ENSETEG00000008201	-	74	90.863	Echinops_telfairi
ENSMICG00000010326	RAVER1	69	95.037	ENSEASG00005010544	-	93	91.163	Equus_asinus_asinus
ENSMICG00000010326	RAVER1	99	91.810	ENSECAG00000024966	RAVER1	99	91.810	Equus_caballus
ENSMICG00000010326	RAVER1	98	53.648	ENSELUG00000023287	raver1	93	52.851	Esox_lucius
ENSMICG00000010326	RAVER1	99	91.546	ENSFCAG00000009435	RAVER1	99	91.678	Felis_catus
ENSMICG00000010326	RAVER1	99	88.259	ENSFDAG00000015113	RAVER1	99	88.799	Fukomys_damarensis
ENSMICG00000010326	RAVER1	96	52.833	ENSGMOG00000003649	raver1	96	52.381	Gadus_morhua
ENSMICG00000010326	RAVER1	70	45.968	ENSGALG00000050608	-	54	45.261	Gallus_gallus
ENSMICG00000010326	RAVER1	99	52.078	ENSGAFG00000015944	raver1	94	50.899	Gambusia_affinis
ENSMICG00000010326	RAVER1	52	67.575	ENSGACG00000013818	raver1	99	50.668	Gasterosteus_aculeatus
ENSMICG00000010326	RAVER1	96	65.455	ENSGAGG00000011748	-	96	77.419	Gopherus_agassizii
ENSMICG00000010326	RAVER1	99	91.788	ENSGGOG00000006015	RAVER1	99	91.523	Gorilla_gorilla
ENSMICG00000010326	RAVER1	95	51.603	ENSHBUG00000021210	raver1	91	52.579	Haplochromis_burtoni
ENSMICG00000010326	RAVER1	99	87.989	ENSHGLG00000015460	RAVER1	99	87.719	Heterocephalus_glaber_female
ENSMICG00000010326	RAVER1	99	87.989	ENSHGLG00100000812	RAVER1	99	87.719	Heterocephalus_glaber_male
ENSMICG00000010326	RAVER1	98	52.192	ENSHCOG00000000449	raver1	91	52.321	Hippocampus_comes
ENSMICG00000010326	RAVER1	97	54.676	ENSIPUG00000013153	raver1	99	50.996	Ictalurus_punctatus
ENSMICG00000010326	RAVER1	99	91.610	ENSSTOG00000003241	RAVER1	99	91.204	Ictidomys_tridecemlineatus
ENSMICG00000010326	RAVER1	99	88.694	ENSJJAG00000018219	-	99	88.694	Jaculus_jaculus
ENSMICG00000010326	RAVER1	98	52.401	ENSKMAG00000017355	raver1	93	51.412	Kryptolebias_marmoratus
ENSMICG00000010326	RAVER1	89	51.011	ENSLBEG00000008268	raver1	70	58.268	Labrus_bergylta
ENSMICG00000010326	RAVER1	90	59.800	ENSLACG00000005809	-	99	60.057	Latimeria_chalumnae
ENSMICG00000010326	RAVER1	97	56.790	ENSLOCG00000007500	raver1	93	56.121	Lepisosteus_oculatus
ENSMICG00000010326	RAVER1	99	89.879	ENSLAFG00000003664	-	96	94.937	Loxodonta_africana
ENSMICG00000010326	RAVER1	99	91.788	ENSMFAG00000037977	RAVER1	99	91.656	Macaca_fascicularis
ENSMICG00000010326	RAVER1	99	92.053	ENSMMUG00000014897	RAVER1	99	91.921	Macaca_mulatta
ENSMICG00000010326	RAVER1	99	92.053	ENSMNEG00000028390	RAVER1	99	91.921	Macaca_nemestrina
ENSMICG00000010326	RAVER1	99	91.870	ENSMLEG00000041959	RAVER1	99	91.921	Mandrillus_leucophaeus
ENSMICG00000010326	RAVER1	77	76.923	ENSMAMG00000012059	raver1	93	51.961	Mastacembelus_armatus
ENSMICG00000010326	RAVER1	96	51.739	ENSMZEG00005019002	raver1	91	52.647	Maylandia_zebra
ENSMICG00000010326	RAVER1	99	87.752	ENSMAUG00000017948	-	99	87.618	Mesocricetus_auratus
ENSMICG00000010326	RAVER1	99	88.259	ENSMOCG00000015553	-	99	88.259	Microtus_ochrogaster
ENSMICG00000010326	RAVER1	98	52.211	ENSMMOG00000012093	raver1	93	50.904	Mola_mola
ENSMICG00000010326	RAVER1	96	79.215	ENSMODG00000005584	-	91	78.164	Monodelphis_domestica
ENSMICG00000010326	RAVER1	98	51.806	ENSMALG00000016569	raver1	93	51.613	Monopterus_albus
ENSMICG00000010326	RAVER1	99	86.479	MGP_CAROLIEiJ_G0031860	-	99	86.479	Mus_caroli
ENSMICG00000010326	RAVER1	99	86.345	ENSMUSG00000010205	Raver1	99	86.479	Mus_musculus
ENSMICG00000010326	RAVER1	99	85.353	MGP_PahariEiJ_G0014726	-	99	86.285	Mus_pahari
ENSMICG00000010326	RAVER1	99	86.212	MGP_SPRETEiJ_G0032984	-	99	86.345	Mus_spretus
ENSMICG00000010326	RAVER1	99	91.017	ENSMPUG00000006712	RAVER1	99	91.149	Mustela_putorius_furo
ENSMICG00000010326	RAVER1	99	93.733	ENSMLUG00000012328	RAVER1	99	93.733	Myotis_lucifugus
ENSMICG00000010326	RAVER1	99	86.992	ENSNGAG00000001260	-	99	86.856	Nannospalax_galili
ENSMICG00000010326	RAVER1	96	46.802	ENSNBRG00000010139	raver1	91	46.535	Neolamprologus_brichardi
ENSMICG00000010326	RAVER1	99	91.258	ENSNLEG00000012181	RAVER1	99	90.993	Nomascus_leucogenys
ENSMICG00000010326	RAVER1	90	74.359	ENSMEUG00000003281	-	99	74.169	Notamacropus_eugenii
ENSMICG00000010326	RAVER1	99	89.069	ENSODEG00000016260	RAVER1	99	89.069	Octodon_degus
ENSMICG00000010326	RAVER1	96	53.353	ENSONIG00000001559	raver1	99	53.035	Oreochromis_niloticus
ENSMICG00000010326	RAVER1	99	83.644	ENSOCUG00000020918	RAVER1	99	83.378	Oryctolagus_cuniculus
ENSMICG00000010326	RAVER1	72	66.667	ENSORLG00000005458	raver1	68	66.667	Oryzias_latipes
ENSMICG00000010326	RAVER1	72	66.423	ENSORLG00020004392	raver1	68	66.423	Oryzias_latipes_hni
ENSMICG00000010326	RAVER1	57	66.180	ENSORLG00015017222	raver1	55	66.180	Oryzias_latipes_hsok
ENSMICG00000010326	RAVER1	97	51.170	ENSOMEG00000023956	raver1	67	81.250	Oryzias_melastigma
ENSMICG00000010326	RAVER1	99	92.032	ENSOGAG00000011071	RAVER1	99	91.766	Otolemur_garnettii
ENSMICG00000010326	RAVER1	99	86.275	ENSOARG00000015886	RAVER1	99	87.054	Ovis_aries
ENSMICG00000010326	RAVER1	99	92.053	ENSPPAG00000002611	RAVER1	99	91.788	Pan_paniscus
ENSMICG00000010326	RAVER1	99	91.942	ENSPPRG00000009912	RAVER1	99	92.074	Panthera_pardus
ENSMICG00000010326	RAVER1	99	92.053	ENSPTRG00000010466	RAVER1	99	91.788	Pan_troglodytes
ENSMICG00000010326	RAVER1	99	92.318	ENSPANG00000004122	RAVER1	99	92.185	Papio_anubis
ENSMICG00000010326	RAVER1	99	88.544	ENSPEMG00000016411	-	99	88.544	Peromyscus_maniculatus_bairdii
ENSMICG00000010326	RAVER1	99	79.172	ENSPCIG00000018695	-	99	78.345	Phascolarctos_cinereus
ENSMICG00000010326	RAVER1	97	52.676	ENSPFOG00000007016	raver1	92	51.599	Poecilia_formosa
ENSMICG00000010326	RAVER1	97	49.162	ENSPLAG00000020793	raver1	92	49.652	Poecilia_latipinna
ENSMICG00000010326	RAVER1	97	53.475	ENSPMEG00000011220	raver1	92	52.254	Poecilia_mexicana
ENSMICG00000010326	RAVER1	97	51.729	ENSPREG00000006864	raver1	92	50.782	Poecilia_reticulata
ENSMICG00000010326	RAVER1	99	90.981	ENSPPYG00000010514	RAVER1	85	90.993	Pongo_abelii
ENSMICG00000010326	RAVER1	99	94.079	ENSPCOG00000026605	RAVER1	99	94.079	Propithecus_coquereli
ENSMICG00000010326	RAVER1	99	91.033	ENSPVAG00000003689	RAVER1	99	90.082	Pteropus_vampyrus
ENSMICG00000010326	RAVER1	64	82.000	ENSPNYG00000013284	raver1	64	82.000	Pundamilia_nyererei
ENSMICG00000010326	RAVER1	99	52.132	ENSPNAG00000015476	raver1	99	50.978	Pygocentrus_nattereri
ENSMICG00000010326	RAVER1	99	85.542	ENSRNOG00000020710	Raver1	99	86.078	Rattus_norvegicus
ENSMICG00000010326	RAVER1	99	94.158	ENSRBIG00000034702	RAVER1	99	94.293	Rhinopithecus_bieti
ENSMICG00000010326	RAVER1	99	94.429	ENSRROG00000031186	RAVER1	99	94.429	Rhinopithecus_roxellana
ENSMICG00000010326	RAVER1	99	92.935	ENSSBOG00000023423	RAVER1	99	92.663	Saimiri_boliviensis_boliviensis
ENSMICG00000010326	RAVER1	90	79.531	ENSSHAG00000008181	-	90	79.531	Sarcophilus_harrisii
ENSMICG00000010326	RAVER1	97	50.640	ENSSMAG00000004546	raver1	93	50.477	Scophthalmus_maximus
ENSMICG00000010326	RAVER1	97	52.186	ENSSDUG00000021063	raver1	92	52.707	Seriola_dumerili
ENSMICG00000010326	RAVER1	71	59.245	ENSSLDG00000014505	raver1	92	51.690	Seriola_lalandi_dorsalis
ENSMICG00000010326	RAVER1	97	53.372	ENSSPAG00000000688	raver1	92	52.162	Stegastes_partitus
ENSMICG00000010326	RAVER1	99	94.568	ENSSSCG00000013650	-	99	94.568	Sus_scrofa
ENSMICG00000010326	RAVER1	98	52.254	ENSTRUG00000025641	raver1	93	51.172	Takifugu_rubripes
ENSMICG00000010326	RAVER1	99	91.576	ENSTTRG00000009552	RAVER1	99	91.304	Tursiops_truncatus
ENSMICG00000010326	RAVER1	99	91.942	ENSUAMG00000020385	RAVER1	99	92.074	Ursus_americanus
ENSMICG00000010326	RAVER1	99	94.558	ENSVVUG00000028976	RAVER1	99	94.694	Vulpes_vulpes
ENSMICG00000010326	RAVER1	99	57.317	ENSXETG00000011622	raver1	99	55.345	Xenopus_tropicalis
ENSMICG00000010326	RAVER1	99	52.587	ENSXCOG00000016368	raver1	94	51.189	Xiphophorus_couchianus
ENSMICG00000010326	RAVER1	99	52.661	ENSXMAG00000000217	raver1	94	51.329	Xiphophorus_maculatus