EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000010340 (Gene tree)
Gene ID: 105885924
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 4974 bases
Position: chr2:122515212-122520185
Accession: 105885924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000022244	MMR_HSR1	PF01926.23	0.00016	1	1
ENSMICP00000045329	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000010338	-	372	-	ENSMICP00000009417	123 (aa)	-	UPI00085AFFE0
ENSMICT00000028905	-	618	-	ENSMICP00000022244	205 (aa)	-	UPI000C2EBDAC
ENSMICT00000070604	-	1155	XM_012791246	ENSMICP00000045329	202 (aa)	XP_012646700	UPI0001773BFE

Gene Model

Click here to download ENSMICG00000010340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000010340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000010340	-	82	37.500	ENSMICG00000041433	-	86	37.500
ENSMICG00000010340	-	78	41.772	ENSMICG00000049590	RAB6B	76	41.772
ENSMICG00000010340	-	80	42.353	ENSMICG00000029915	-	77	42.353
ENSMICG00000010340	-	85	51.744	ENSMICG00000030661	RAB12	72	51.744
ENSMICG00000010340	-	94	41.146	ENSMICG00000002230	RAB25	88	41.146
ENSMICG00000010340	-	84	47.929	ENSMICG00000034540	RAB2A	80	47.929
ENSMICG00000010340	-	80	39.752	ENSMICG00000002882	RAB31	83	39.752
ENSMICG00000010340	-	83	40.936	ENSMICG00000011086	RAB5B	78	40.936
ENSMICG00000010340	-	82	44.242	ENSMICG00000003350	RAB14	84	44.286
ENSMICG00000010340	-	65	30.075	ENSMICG00000002015	-	71	30.075
ENSMICG00000010340	-	84	35.632	ENSMICG00000006266	RERG	84	35.632
ENSMICG00000010340	-	80	31.214	ENSMICG00000000653	-	75	31.214
ENSMICG00000010340	-	58	33.884	ENSMICG00000049117	ARL14	60	33.884
ENSMICG00000010340	-	94	41.176	ENSMICG00000034065	-	94	41.176
ENSMICG00000010340	-	99	39.320	ENSMICG00000034809	-	88	39.320
ENSMICG00000010340	-	87	37.430	ENSMICG00000008382	-	92	37.430
ENSMICG00000010340	-	91	36.216	ENSMICG00000001474	CASC1	97	36.216
ENSMICG00000010340	-	63	31.206	ENSMICG00000008840	ARFRP1	68	31.206
ENSMICG00000010340	-	80	37.654	ENSMICG00000036237	-	88	37.654
ENSMICG00000010340	-	82	30.114	ENSMICG00000027424	DNAJC27	90	30.818
ENSMICG00000010340	-	71	33.793	ENSMICG00000033790	RHEB	91	33.793
ENSMICG00000010340	-	81	40.476	ENSMICG00000003057	RAB9B	83	40.476
ENSMICG00000010340	-	92	43.617	ENSMICG00000041504	RAB11A	87	43.617
ENSMICG00000010340	-	86	44.000	ENSMICG00000017280	RAB18	84	44.000
ENSMICG00000010340	-	79	31.481	ENSMICG00000031301	-	69	31.481
ENSMICG00000010340	-	79	39.506	ENSMICG00000015683	RAB36	51	39.506
ENSMICG00000010340	-	78	43.038	ENSMICG00000031565	RAB6A	76	43.038
ENSMICG00000010340	-	80	49.383	ENSMICG00000012002	RAB30	80	49.383
ENSMICG00000010340	-	81	38.788	ENSMICG00000014037	RAB23	69	38.788
ENSMICG00000010340	-	80	42.236	ENSMICG00000041608	RAB5C	75	42.236
ENSMICG00000010340	-	90	55.249	ENSMICG00000012587	RAB1A	88	55.249
ENSMICG00000010340	-	67	30.882	ENSMICG00000000091	ARF5	72	30.882
ENSMICG00000010340	-	80	44.099	ENSMICG00000049130	RAB5A	75	44.099
ENSMICG00000010340	-	94	54.211	ENSMICG00000029171	RAB1B	93	54.211
ENSMICG00000010340	-	86	46.629	ENSMICG00000044410	RAB39B	84	46.629
ENSMICG00000010340	-	84	53.529	ENSMICG00000013101	RAB15	88	50.532
ENSMICG00000010340	-	80	36.810	ENSMICG00000049226	MRAS	78	36.810
ENSMICG00000010340	-	84	35.795	ENSMICG00000038752	-	87	35.795
ENSMICG00000010340	-	80	38.889	ENSMICG00000006472	HRAS	85	38.889
ENSMICG00000010340	-	95	37.864	ENSMICG00000016913	RAB34	79	37.864
ENSMICG00000010340	-	62	30.159	ENSMICG00000012249	ARL3	66	30.159
ENSMICG00000010340	-	85	43.169	ENSMICG00000034851	RAB33A	77	43.169
ENSMICG00000010340	-	84	55.294	ENSMICG00000047356	RAB35	95	50.521

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000010340	-	100	97.044	ENSG00000143545	RAB13	100	97.044	Homo_sapiens
ENSMICG00000010340	-	95	79.167	ENSACIG00000008584	rab13	92	79.167	Amphilophus_citrinellus
ENSMICG00000010340	-	100	96.059	ENSANAG00000030247	-	100	96.059	Aotus_nancymaae
ENSMICG00000010340	-	99	79.602	ENSAMXG00000030712	rab13	99	79.602	Astyanax_mexicanus
ENSMICG00000010340	-	100	95.074	ENSBTAG00000017604	RAB13	100	95.074	Bos_taurus
ENSMICG00000010340	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSMICG00000010340	-	94	96.296	ENSCJAG00000009933	-	100	95.567	Callithrix_jacchus
ENSMICG00000010340	-	100	94.581	ENSCHIG00000022271	-	100	94.581	Capra_hircus
ENSMICG00000010340	-	99	90.099	ENSCPOG00000011491	-	99	90.099	Cavia_porcellus
ENSMICG00000010340	-	100	96.552	ENSCCAG00000028502	-	100	96.552	Cebus_capucinus
ENSMICG00000010340	-	100	97.044	ENSCATG00000041779	-	100	97.044	Cercocebus_atys
ENSMICG00000010340	-	100	90.148	ENSCLAG00000006603	-	100	90.148	Chinchilla_lanigera
ENSMICG00000010340	-	100	97.044	ENSCANG00000036573	-	100	97.044	Colobus_angolensis_palliatus
ENSMICG00000010340	-	100	92.611	ENSCGRG00001021505	Rab13	100	92.611	Cricetulus_griseus_chok1gshd
ENSMICG00000010340	-	100	92.611	ENSCGRG00000012126	Rab13	100	92.611	Cricetulus_griseus_crigri
ENSMICG00000010340	-	99	77.451	ENSCSEG00000002358	rab13	99	77.451	Cynoglossus_semilaevis
ENSMICG00000010340	-	99	78.607	ENSDARG00000034771	rab13	99	78.607	Danio_rerio
ENSMICG00000010340	-	100	92.611	ENSDORG00000001591	Rab13	100	92.611	Dipodomys_ordii
ENSMICG00000010340	-	100	96.552	ENSEASG00005000683	-	100	96.552	Equus_asinus_asinus
ENSMICG00000010340	-	100	96.552	ENSECAG00000016551	RAB13	100	96.552	Equus_caballus
ENSMICG00000010340	-	99	89.604	ENSEEUG00000001233	-	99	89.604	Erinaceus_europaeus
ENSMICG00000010340	-	99	77.612	ENSELUG00000012801	rab13	99	77.612	Esox_lucius
ENSMICG00000010340	-	100	90.148	ENSFCAG00000045269	-	100	90.148	Felis_catus
ENSMICG00000010340	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSMICG00000010340	-	99	76.119	ENSFHEG00000021221	rab13	96	85.143	Fundulus_heteroclitus
ENSMICG00000010340	-	99	76.119	ENSGACG00000011925	rab13	99	76.119	Gasterosteus_aculeatus
ENSMICG00000010340	-	94	85.714	ENSGAGG00000000742	-	99	80.788	Gopherus_agassizii
ENSMICG00000010340	-	100	97.044	ENSGGOG00000023693	RAB13	100	97.044	Gorilla_gorilla
ENSMICG00000010340	-	100	90.099	ENSHGLG00000008749	RAB13	100	90.099	Heterocephalus_glaber_female
ENSMICG00000010340	-	100	90.099	ENSHGLG00100013608	RAB13	100	90.099	Heterocephalus_glaber_male
ENSMICG00000010340	-	99	74.627	ENSHCOG00000007440	rab13	96	85.714	Hippocampus_comes
ENSMICG00000010340	-	99	77.387	ENSIPUG00000003199	rab13	99	77.387	Ictalurus_punctatus
ENSMICG00000010340	-	100	95.074	ENSSTOG00000011222	-	100	95.074	Ictidomys_tridecemlineatus
ENSMICG00000010340	-	100	91.133	ENSJJAG00000010575	Rab13	100	91.133	Jaculus_jaculus
ENSMICG00000010340	-	99	76.382	ENSKMAG00000001908	rab13	99	76.382	Kryptolebias_marmoratus
ENSMICG00000010340	-	99	77.387	ENSLBEG00000026779	rab13	99	77.387	Labrus_bergylta
ENSMICG00000010340	-	85	77.907	ENSLACG00000008103	-	98	77.143	Latimeria_chalumnae
ENSMICG00000010340	-	100	97.044	ENSMFAG00000041018	RAB13	100	97.044	Macaca_fascicularis
ENSMICG00000010340	-	100	97.044	ENSMNEG00000028951	-	100	97.044	Macaca_nemestrina
ENSMICG00000010340	-	100	97.044	ENSMLEG00000042247	-	100	97.044	Mandrillus_leucophaeus
ENSMICG00000010340	-	99	76.119	ENSMAMG00000014602	rab13	99	76.119	Mastacembelus_armatus
ENSMICG00000010340	-	100	91.626	ENSMAUG00000015713	Rab13	100	91.626	Mesocricetus_auratus
ENSMICG00000010340	-	100	93.103	ENSMOCG00000021448	Rab13	100	93.103	Microtus_ochrogaster
ENSMICG00000010340	-	99	91.089	ENSMODG00000017295	-	84	91.089	Monodelphis_domestica
ENSMICG00000010340	-	100	90.148	MGP_CAROLIEiJ_G0025227	Rab13	100	90.148	Mus_caroli
ENSMICG00000010340	-	100	90.099	ENSMUSG00000027935	Rab13	100	90.099	Mus_musculus
ENSMICG00000010340	-	99	90.050	MGP_PahariEiJ_G0026671	Rab13	99	90.050	Mus_pahari
ENSMICG00000010340	-	100	94.059	ENSNGAG00000010309	Rab13	100	94.059	Nannospalax_galili
ENSMICG00000010340	-	99	77.114	ENSNBRG00000004124	rab13	99	77.114	Neolamprologus_brichardi
ENSMICG00000010340	-	100	97.044	ENSNLEG00000028944	-	100	97.044	Nomascus_leucogenys
ENSMICG00000010340	-	100	91.667	ENSMEUG00000009667	-	100	91.667	Notamacropus_eugenii
ENSMICG00000010340	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSMICG00000010340	-	100	88.670	ENSODEG00000010443	-	100	88.670	Octodon_degus
ENSMICG00000010340	-	99	77.723	ENSONIG00000006340	rab13	99	77.723	Oreochromis_niloticus
ENSMICG00000010340	-	88	94.944	ENSOCUG00000006286	-	100	94.944	Oryctolagus_cuniculus
ENSMICG00000010340	-	99	77.114	ENSOMEG00000008210	rab13	99	77.114	Oryzias_melastigma
ENSMICG00000010340	-	99	93.035	ENSOGAG00000016969	-	99	93.035	Otolemur_garnettii
ENSMICG00000010340	-	100	97.044	ENSPPAG00000028435	-	100	97.044	Pan_paniscus
ENSMICG00000010340	-	100	90.148	ENSPPRG00000008865	-	100	90.148	Panthera_pardus
ENSMICG00000010340	-	100	97.044	ENSPTRG00000001370	RAB13	100	97.044	Pan_troglodytes
ENSMICG00000010340	-	100	97.044	ENSPANG00000004479	-	100	97.044	Papio_anubis
ENSMICG00000010340	-	99	76.617	ENSPMGG00000007680	rab13	99	76.617	Periophthalmus_magnuspinnatus
ENSMICG00000010340	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSMICG00000010340	-	100	91.667	ENSPCIG00000029350	-	100	91.667	Phascolarctos_cinereus
ENSMICG00000010340	-	86	83.815	ENSPLAG00000005832	RAB13	94	83.429	Poecilia_latipinna
ENSMICG00000010340	-	90	80.663	ENSPREG00000017567	rab13	99	74.627	Poecilia_reticulata
ENSMICG00000010340	-	100	97.044	ENSPPYG00000000790	-	100	97.044	Pongo_abelii
ENSMICG00000010340	-	100	98.515	ENSPCOG00000012189	-	100	98.515	Propithecus_coquereli
ENSMICG00000010340	-	100	93.069	ENSPVAG00000011095	-	100	93.069	Pteropus_vampyrus
ENSMICG00000010340	-	87	84.659	ENSPNAG00000004189	rab13	93	85.714	Pygocentrus_nattereri
ENSMICG00000010340	-	100	90.148	ENSRNOG00000016733	Rab13	100	90.148	Rattus_norvegicus
ENSMICG00000010340	-	100	96.552	ENSRBIG00000008552	-	100	96.552	Rhinopithecus_bieti
ENSMICG00000010340	-	100	96.552	ENSRROG00000036885	-	100	96.552	Rhinopithecus_roxellana
ENSMICG00000010340	-	100	97.030	ENSSBOG00000020342	-	100	97.030	Saimiri_boliviensis_boliviensis
ENSMICG00000010340	-	100	91.176	ENSSHAG00000011866	-	100	91.176	Sarcophilus_harrisii
ENSMICG00000010340	-	100	95.567	ENSSSCG00000006564	-	100	95.567	Sus_scrofa
ENSMICG00000010340	-	99	77.612	ENSTRUG00000024177	rab13	99	77.612	Takifugu_rubripes
ENSMICG00000010340	-	100	95.074	ENSTBEG00000012734	-	100	95.074	Tupaia_belangeri
ENSMICG00000010340	-	100	96.552	ENSTTRG00000011183	-	100	96.552	Tursiops_truncatus
ENSMICG00000010340	-	71	81.250	ENSXETG00000020729	rab13	99	77.019	Xenopus_tropicalis
ENSMICG00000010340	-	86	82.659	ENSXCOG00000019533	rab13	94	82.286	Xiphophorus_couchianus