EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000011086 (Gene tree)
Gene ID: 105864957
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 23234 bases
Position: chr7:81146594-81169827
Accession: 105864957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000036180	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000051884	RAB5B-203	255	-	ENSMICP00000016458	84 (aa)	-	UPI00085B1DB4
ENSMICT00000031781	RAB5B-201	1839	XM_012753179	ENSMICP00000036180	215 (aa)	XP_012608633	UPI0001C0D656
ENSMICT00000011080	RAB5B-202	525	-	ENSMICP00000010092	174 (aa)	-	UPI00085B2D22

Gene Model

Click here to download ENSMICG00000011086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000011086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000011086	RAB5B	75	38.554	ENSMICG00000034851	RAB33A	70	38.554
ENSMICG00000011086	RAB5B	85	34.783	ENSMICG00000030661	RAB12	79	34.574
ENSMICG00000011086	RAB5B	99	41.518	ENSMICG00000034065	-	99	41.518
ENSMICG00000011086	RAB5B	78	42.857	ENSMICG00000012002	RAB30	83	42.857
ENSMICG00000011086	RAB5B	82	33.880	ENSMICG00000006472	HRAS	96	33.880
ENSMICG00000011086	RAB5B	78	40.936	ENSMICG00000010340	-	83	40.936
ENSMICG00000011086	RAB5B	97	85.646	ENSMICG00000041608	RAB5C	97	85.646
ENSMICG00000011086	RAB5B	80	42.222	ENSMICG00000017280	RAB18	85	42.938
ENSMICG00000011086	RAB5B	90	43.299	ENSMICG00000012587	RAB1A	95	43.299
ENSMICG00000011086	RAB5B	75	45.342	ENSMICG00000002230	RAB25	76	45.342
ENSMICG00000011086	RAB5B	81	32.022	ENSMICG00000036237	-	97	32.022
ENSMICG00000011086	RAB5B	77	45.783	ENSMICG00000049590	RAB6B	80	45.783
ENSMICG00000011086	RAB5B	75	43.478	ENSMICG00000034540	RAB2A	76	43.478
ENSMICG00000011086	RAB5B	82	36.932	ENSMICG00000013101	RAB15	83	36.932
ENSMICG00000011086	RAB5B	55	30.159	ENSMICG00000044178	ARL4A	60	30.159
ENSMICG00000011086	RAB5B	75	44.720	ENSMICG00000003350	RAB14	81	41.176
ENSMICG00000011086	RAB5B	90	37.949	ENSMICG00000047356	RAB35	95	39.583
ENSMICG00000011086	RAB5B	79	32.955	ENSMICG00000029915	-	78	34.320
ENSMICG00000011086	RAB5B	78	31.395	ENSMICG00000006266	RERG	84	31.395
ENSMICG00000011086	RAB5B	77	45.181	ENSMICG00000031565	RAB6A	80	45.181
ENSMICG00000011086	RAB5B	62	30.282	ENSMICG00000038748	ARL8A	73	30.282
ENSMICG00000011086	RAB5B	74	38.125	ENSMICG00000014037	RAB23	67	38.125
ENSMICG00000011086	RAB5B	100	81.860	ENSMICG00000049130	RAB5A	100	81.860
ENSMICG00000011086	RAB5B	75	47.205	ENSMICG00000041504	RAB11A	75	47.205
ENSMICG00000011086	RAB5B	78	35.882	ENSMICG00000044410	RAB39B	80	35.882
ENSMICG00000011086	RAB5B	93	34.804	ENSMICG00000041433	-	99	34.804
ENSMICG00000011086	RAB5B	78	36.571	ENSMICG00000003057	RAB9B	85	36.571
ENSMICG00000011086	RAB5B	77	32.335	ENSMICG00000001474	CASC1	85	32.515
ENSMICG00000011086	RAB5B	72	34.375	ENSMICG00000014668	REM1	55	33.533
ENSMICG00000011086	RAB5B	73	42.593	ENSMICG00000038752	-	81	42.593
ENSMICG00000011086	RAB5B	80	31.319	ENSMICG00000000653	-	77	31.319
ENSMICG00000011086	RAB5B	62	30.986	ENSMICG00000029477	-	73	30.986
ENSMICG00000011086	RAB5B	90	47.938	ENSMICG00000008382	-	98	47.938
ENSMICG00000011086	RAB5B	71	35.948	ENSMICG00000031301	-	65	35.948
ENSMICG00000011086	RAB5B	67	35.862	ENSMICG00000033790	RHEB	91	35.862
ENSMICG00000011086	RAB5B	73	36.250	ENSMICG00000015683	RAB36	51	36.250
ENSMICG00000011086	RAB5B	91	45.918	ENSMICG00000002882	RAB31	98	45.918
ENSMICG00000011086	RAB5B	76	46.626	ENSMICG00000029171	RAB1B	81	46.626
ENSMICG00000011086	RAB5B	82	39.344	ENSMICG00000034809	-	79	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000011086	RAB5B	100	99.535	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSMICG00000011086	RAB5B	100	99.078	ENSAMEG00000003196	RAB5B	100	99.078	Ailuropoda_melanoleuca
ENSMICG00000011086	RAB5B	100	95.814	ENSACAG00000005380	RAB5B	100	95.814	Anolis_carolinensis
ENSMICG00000011086	RAB5B	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
ENSMICG00000011086	RAB5B	100	99.070	ENSBTAG00000014129	RAB5B	100	99.070	Bos_taurus
ENSMICG00000011086	RAB5B	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
ENSMICG00000011086	RAB5B	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
ENSMICG00000011086	RAB5B	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
ENSMICG00000011086	RAB5B	97	99.519	ENSCHIG00000010333	RAB5B	96	99.519	Capra_hircus
ENSMICG00000011086	RAB5B	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
ENSMICG00000011086	RAB5B	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
ENSMICG00000011086	RAB5B	100	99.535	ENSCCAG00000019480	RAB5B	100	99.535	Cebus_capucinus
ENSMICG00000011086	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSMICG00000011086	RAB5B	100	99.535	ENSCSAG00000005277	RAB5B	100	99.535	Chlorocebus_sabaeus
ENSMICG00000011086	RAB5B	100	95.814	ENSCPBG00000012712	RAB5B	100	95.814	Chrysemys_picta_bellii
ENSMICG00000011086	RAB5B	100	99.070	ENSCGRG00001000428	Rab5b	100	99.070	Cricetulus_griseus_chok1gshd
ENSMICG00000011086	RAB5B	100	99.070	ENSCGRG00000009508	-	100	99.070	Cricetulus_griseus_crigri
ENSMICG00000011086	RAB5B	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
ENSMICG00000011086	RAB5B	100	99.070	ENSECAG00000023306	RAB5B	100	99.070	Equus_caballus
ENSMICG00000011086	RAB5B	100	99.535	ENSEEUG00000006745	RAB5B	100	99.535	Erinaceus_europaeus
ENSMICG00000011086	RAB5B	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
ENSMICG00000011086	RAB5B	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
ENSMICG00000011086	RAB5B	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
ENSMICG00000011086	RAB5B	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSMICG00000011086	RAB5B	100	99.070	ENSJJAG00000019506	Rab5b	100	99.070	Jaculus_jaculus
ENSMICG00000011086	RAB5B	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
ENSMICG00000011086	RAB5B	100	99.535	ENSMFAG00000029992	RAB5B	100	99.535	Macaca_fascicularis
ENSMICG00000011086	RAB5B	100	99.535	ENSMMUG00000031853	RAB5B	100	99.535	Macaca_mulatta
ENSMICG00000011086	RAB5B	100	99.535	ENSMNEG00000005338	RAB5B	100	99.535	Macaca_nemestrina
ENSMICG00000011086	RAB5B	100	99.535	ENSMLEG00000034462	RAB5B	100	99.535	Mandrillus_leucophaeus
ENSMICG00000011086	RAB5B	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
ENSMICG00000011086	RAB5B	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
ENSMICG00000011086	RAB5B	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
ENSMICG00000011086	RAB5B	100	99.070	MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	Mus_spretus
ENSMICG00000011086	RAB5B	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
ENSMICG00000011086	RAB5B	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
ENSMICG00000011086	RAB5B	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
ENSMICG00000011086	RAB5B	100	99.070	ENSODEG00000003860	RAB5B	100	99.070	Octodon_degus
ENSMICG00000011086	RAB5B	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
ENSMICG00000011086	RAB5B	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
ENSMICG00000011086	RAB5B	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
ENSMICG00000011086	RAB5B	100	99.535	ENSPTRG00000005071	RAB5B	97	99.043	Pan_troglodytes
ENSMICG00000011086	RAB5B	99	98.598	ENSPANG00000021075	RAB5B	97	98.598	Papio_anubis
ENSMICG00000011086	RAB5B	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
ENSMICG00000011086	RAB5B	100	98.605	ENSRNOG00000006130	Rab5b	100	98.605	Rattus_norvegicus
ENSMICG00000011086	RAB5B	100	99.535	ENSRBIG00000013165	RAB5B	100	99.535	Rhinopithecus_bieti
ENSMICG00000011086	RAB5B	100	99.535	ENSRROG00000037973	RAB5B	100	99.535	Rhinopithecus_roxellana
ENSMICG00000011086	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSMICG00000011086	RAB5B	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
ENSMICG00000011086	RAB5B	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
ENSMICG00000011086	RAB5B	100	95.814	ENSSPUG00000014873	RAB5B	100	95.814	Sphenodon_punctatus
ENSMICG00000011086	RAB5B	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
ENSMICG00000011086	RAB5B	100	100.000	ENSUAMG00000014651	RAB5B	100	100.000	Ursus_americanus
ENSMICG00000011086	RAB5B	100	100.000	ENSUMAG00000016263	RAB5B	100	100.000	Ursus_maritimus
ENSMICG00000011086	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes