EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000011146 (Gene tree)
Gene ID: 105857121
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 18650 bases
Position: chr20:20330130-20348779
Accession: 105857121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000017586	R3H	PF01424.22	2e-15	1	1
ENSMICP00000017699	R3H	PF01424.22	2.8e-15	1	1
ENSMICP00000010151	R3H	PF01424.22	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000026462	R3HCC1-201	5621	-	ENSMICP00000017699	466 (aa)	-	UPI00085AF274
ENSMICT00000011145	R3HCC1-202	1632	XM_020282808	ENSMICP00000010151	481 (aa)	XP_020138397	UPI00098AA9F6
ENSMICT00000041137	R3HCC1-203	1194	-	ENSMICP00000017586	397 (aa)	-	UPI00085B340D

Gene Model

Click here to download ENSMICG00000011146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000011146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000011146	R3HCC1	100	84.925	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSMICG00000011146	R3HCC1	70	44.118	ENSAPOG00000003616	r3hcc1	97	33.615	Acanthochromis_polyacanthus
ENSMICG00000011146	R3HCC1	94	79.773	ENSAMEG00000002963	R3HCC1	93	78.125	Ailuropoda_melanoleuca
ENSMICG00000011146	R3HCC1	96	30.769	ENSACIG00000017144	r3hcc1	95	37.423	Amphilophus_citrinellus
ENSMICG00000011146	R3HCC1	56	48.872	ENSAOCG00000003945	r3hcc1	97	33.787	Amphiprion_ocellaris
ENSMICG00000011146	R3HCC1	56	48.872	ENSAPEG00000003613	r3hcc1	97	33.560	Amphiprion_percula
ENSMICG00000011146	R3HCC1	52	53.333	ENSATEG00000023860	r3hcc1	99	32.168	Anabas_testudineus
ENSMICG00000011146	R3HCC1	97	46.911	ENSACAG00000016627	R3HCC1	97	49.433	Anolis_carolinensis
ENSMICG00000011146	R3HCC1	100	85.427	ENSANAG00000036169	R3HCC1	100	84.925	Aotus_nancymaae
ENSMICG00000011146	R3HCC1	98	74.946	ENSBTAG00000025830	R3HCC1	98	75.278	Bos_taurus
ENSMICG00000011146	R3HCC1	100	83.417	ENSCJAG00000020118	R3HCC1	100	83.166	Callithrix_jacchus
ENSMICG00000011146	R3HCC1	94	75.909	ENSCAFG00000009210	R3HCC1	97	75.056	Canis_familiaris
ENSMICG00000011146	R3HCC1	86	69.173	ENSCAFG00020012870	R3HCC1	93	68.922	Canis_lupus_dingo
ENSMICG00000011146	R3HCC1	93	71.397	ENSCHIG00000009107	R3HCC1	98	71.175	Capra_hircus
ENSMICG00000011146	R3HCC1	95	84.944	ENSTSYG00000000511	R3HCC1	79	84.978	Carlito_syrichta
ENSMICG00000011146	R3HCC1	83	62.558	ENSCAPG00000015813	R3HCC1	99	62.326	Cavia_aperea
ENSMICG00000011146	R3HCC1	92	70.064	ENSCPOG00000009696	R3HCC1	99	69.851	Cavia_porcellus
ENSMICG00000011146	R3HCC1	100	84.171	ENSCCAG00000037811	R3HCC1	100	83.920	Cebus_capucinus
ENSMICG00000011146	R3HCC1	100	84.673	ENSCATG00000032971	R3HCC1	100	84.171	Cercocebus_atys
ENSMICG00000011146	R3HCC1	94	77.574	ENSCLAG00000015556	R3HCC1	86	76.786	Chinchilla_lanigera
ENSMICG00000011146	R3HCC1	99	80.778	ENSCSAG00000016250	R3HCC1	97	80.346	Chlorocebus_sabaeus
ENSMICG00000011146	R3HCC1	95	76.404	ENSCHOG00000000396	R3HCC1	99	75.604	Choloepus_hoffmanni
ENSMICG00000011146	R3HCC1	100	84.171	ENSCANG00000029441	R3HCC1	100	83.668	Colobus_angolensis_palliatus
ENSMICG00000011146	R3HCC1	94	64.596	ENSCGRG00001014977	R3hcc1	99	64.596	Cricetulus_griseus_chok1gshd
ENSMICG00000011146	R3HCC1	94	64.596	ENSCGRG00000004454	R3hcc1	99	64.596	Cricetulus_griseus_crigri
ENSMICG00000011146	R3HCC1	90	33.781	ENSCSEG00000005748	r3hcc1	98	32.379	Cynoglossus_semilaevis
ENSMICG00000011146	R3HCC1	77	33.598	ENSCVAG00000002640	r3hcc1	95	33.598	Cyprinodon_variegatus
ENSMICG00000011146	R3HCC1	93	31.579	ENSDARG00000099593	r3hcc1	61	48.864	Danio_rerio
ENSMICG00000011146	R3HCC1	95	79.551	ENSDNOG00000007168	R3HCC1	96	76.940	Dasypus_novemcinctus
ENSMICG00000011146	R3HCC1	94	66.736	ENSDORG00000026365	R3hcc1	99	67.292	Dipodomys_ordii
ENSMICG00000011146	R3HCC1	95	68.233	ENSETEG00000001147	R3HCC1	98	68.315	Echinops_telfairi
ENSMICG00000011146	R3HCC1	94	82.045	ENSEASG00005018782	R3HCC1	80	81.818	Equus_asinus_asinus
ENSMICG00000011146	R3HCC1	95	81.306	ENSECAG00000025013	R3HCC1	98	81.591	Equus_caballus
ENSMICG00000011146	R3HCC1	97	74.890	ENSEEUG00000011918	R3HCC1	99	74.890	Erinaceus_europaeus
ENSMICG00000011146	R3HCC1	92	35.461	ENSELUG00000023650	r3hcc1	99	35.211	Esox_lucius
ENSMICG00000011146	R3HCC1	99	77.106	ENSFCAG00000012395	R3HCC1	98	79.775	Felis_catus
ENSMICG00000011146	R3HCC1	92	70.652	ENSFDAG00000001572	R3HCC1	98	70.870	Fukomys_damarensis
ENSMICG00000011146	R3HCC1	67	35.915	ENSGMOG00000017590	-	67	46.512	Gadus_morhua
ENSMICG00000011146	R3HCC1	96	36.516	ENSGAFG00000008747	-	92	36.528	Gambusia_affinis
ENSMICG00000011146	R3HCC1	96	32.715	ENSGACG00000008447	r3hcc1	98	33.190	Gasterosteus_aculeatus
ENSMICG00000011146	R3HCC1	74	77.528	ENSGAGG00000018009	R3HCC1	55	57.143	Gopherus_agassizii
ENSMICG00000011146	R3HCC1	100	84.383	ENSGGOG00000013817	R3HCC1	100	84.383	Gorilla_gorilla
ENSMICG00000011146	R3HCC1	54	49.624	ENSHBUG00000022250	-	63	49.624	Haplochromis_burtoni
ENSMICG00000011146	R3HCC1	94	76.027	ENSHGLG00000010517	R3HCC1	95	72.198	Heterocephalus_glaber_female
ENSMICG00000011146	R3HCC1	94	76.027	ENSHGLG00100006388	R3HCC1	95	72.198	Heterocephalus_glaber_male
ENSMICG00000011146	R3HCC1	96	34.913	ENSHCOG00000011745	r3hcc1	93	34.889	Hippocampus_comes
ENSMICG00000011146	R3HCC1	97	36.020	ENSIPUG00000024504	r3hcc1	87	38.035	Ictalurus_punctatus
ENSMICG00000011146	R3HCC1	94	71.588	ENSSTOG00000027130	R3HCC1	99	70.130	Ictidomys_tridecemlineatus
ENSMICG00000011146	R3HCC1	94	70.538	ENSJJAG00000013075	R3hcc1	100	70.538	Jaculus_jaculus
ENSMICG00000011146	R3HCC1	86	32.151	ENSKMAG00000000286	r3hcc1	98	31.555	Kryptolebias_marmoratus
ENSMICG00000011146	R3HCC1	80	50.980	ENSLACG00000011894	R3HCC1	97	39.381	Latimeria_chalumnae
ENSMICG00000011146	R3HCC1	97	35.417	ENSLOCG00000015442	r3hcc1	99	34.532	Lepisosteus_oculatus
ENSMICG00000011146	R3HCC1	95	73.101	ENSLAFG00000016137	R3HCC1	96	72.050	Loxodonta_africana
ENSMICG00000011146	R3HCC1	100	84.422	ENSMFAG00000032894	R3HCC1	100	83.920	Macaca_fascicularis
ENSMICG00000011146	R3HCC1	100	84.422	ENSMMUG00000016655	R3HCC1	100	83.920	Macaca_mulatta
ENSMICG00000011146	R3HCC1	100	83.920	ENSMNEG00000043283	R3HCC1	100	83.417	Macaca_nemestrina
ENSMICG00000011146	R3HCC1	100	84.171	ENSMLEG00000030147	R3HCC1	100	84.422	Mandrillus_leucophaeus
ENSMICG00000011146	R3HCC1	90	31.683	ENSMAMG00000018146	r3hcc1	98	32.028	Mastacembelus_armatus
ENSMICG00000011146	R3HCC1	99	45.093	ENSMGAG00000001356	R3HCC1	93	46.120	Meleagris_gallopavo
ENSMICG00000011146	R3HCC1	54	58.140	ENSMAUG00000016096	R3hcc1	99	66.456	Mesocricetus_auratus
ENSMICG00000011146	R3HCC1	94	63.730	ENSMOCG00000018508	R3hcc1	99	64.344	Microtus_ochrogaster
ENSMICG00000011146	R3HCC1	97	47.630	ENSMODG00000016809	-	100	50.112	Monodelphis_domestica
ENSMICG00000011146	R3HCC1	86	31.981	ENSMALG00000000731	r3hcc1	98	31.981	Monopterus_albus
ENSMICG00000011146	R3HCC1	94	64.358	MGP_CAROLIEiJ_G0019467	R3hcc1	99	61.507	Mus_caroli
ENSMICG00000011146	R3HCC1	94	63.747	ENSMUSG00000034194	R3hcc1	99	61.507	Mus_musculus
ENSMICG00000011146	R3HCC1	94	62.777	MGP_PahariEiJ_G0030484	R3hcc1	84	77.576	Mus_pahari
ENSMICG00000011146	R3HCC1	94	63.211	MGP_SPRETEiJ_G0020359	R3hcc1	99	62.118	Mus_spretus
ENSMICG00000011146	R3HCC1	99	74.530	ENSMPUG00000003457	R3HCC1	95	74.322	Mustela_putorius_furo
ENSMICG00000011146	R3HCC1	95	77.354	ENSMLUG00000000266	R3HCC1	94	76.718	Myotis_lucifugus
ENSMICG00000011146	R3HCC1	100	66.739	ENSNGAG00000016747	R3hcc1	100	73.043	Nannospalax_galili
ENSMICG00000011146	R3HCC1	74	33.667	ENSNBRG00000016975	-	74	33.000	Neolamprologus_brichardi
ENSMICG00000011146	R3HCC1	91	80.841	ENSNLEG00000015944	R3HCC1	92	80.841	Nomascus_leucogenys
ENSMICG00000011146	R3HCC1	100	56.916	ENSMEUG00000010587	R3HCC1	99	59.193	Notamacropus_eugenii
ENSMICG00000011146	R3HCC1	97	71.772	ENSOPRG00000013390	R3HCC1	99	71.772	Ochotona_princeps
ENSMICG00000011146	R3HCC1	98	64.224	ENSODEG00000007529	R3HCC1	99	70.042	Octodon_degus
ENSMICG00000011146	R3HCC1	97	55.479	ENSOANG00000013877	R3HCC1	96	59.193	Ornithorhynchus_anatinus
ENSMICG00000011146	R3HCC1	95	71.396	ENSOCUG00000023554	R3HCC1	95	67.689	Oryctolagus_cuniculus
ENSMICG00000011146	R3HCC1	92	34.456	ENSORLG00000016816	r3hcc1	99	33.503	Oryzias_latipes
ENSMICG00000011146	R3HCC1	92	34.367	ENSORLG00020012005	r3hcc1	99	33.083	Oryzias_latipes_hni
ENSMICG00000011146	R3HCC1	92	34.204	ENSORLG00015007018	r3hcc1	99	34.383	Oryzias_latipes_hsok
ENSMICG00000011146	R3HCC1	92	32.812	ENSOMEG00000000816	r3hcc1	99	33.976	Oryzias_melastigma
ENSMICG00000011146	R3HCC1	98	83.188	ENSOGAG00000001291	R3HCC1	96	83.188	Otolemur_garnettii
ENSMICG00000011146	R3HCC1	98	75.000	ENSOARG00000010146	R3HCC1	98	75.336	Ovis_aries
ENSMICG00000011146	R3HCC1	100	82.108	ENSPPAG00000033165	R3HCC1	100	83.636	Pan_paniscus
ENSMICG00000011146	R3HCC1	99	79.442	ENSPPRG00000002522	R3HCC1	99	79.587	Panthera_pardus
ENSMICG00000011146	R3HCC1	90	77.437	ENSPTIG00000011230	R3HCC1	95	77.945	Panthera_tigris_altaica
ENSMICG00000011146	R3HCC1	100	83.088	ENSPTRG00000020076	R3HCC1	100	82.843	Pan_troglodytes
ENSMICG00000011146	R3HCC1	100	84.422	ENSPANG00000000453	R3HCC1	100	84.171	Papio_anubis
ENSMICG00000011146	R3HCC1	84	34.653	ENSPKIG00000020397	-	94	34.586	Paramormyrops_kingsleyae
ENSMICG00000011146	R3HCC1	88	39.167	ENSPKIG00000014426	-	93	38.136	Paramormyrops_kingsleyae
ENSMICG00000011146	R3HCC1	97	46.911	ENSPSIG00000017664	R3HCC1	98	49.011	Pelodiscus_sinensis
ENSMICG00000011146	R3HCC1	54	57.831	ENSPMGG00000007792	r3hcc1	62	46.512	Periophthalmus_magnuspinnatus
ENSMICG00000011146	R3HCC1	93	66.250	ENSPEMG00000007118	R3hcc1	99	65.417	Peromyscus_maniculatus_bairdii
ENSMICG00000011146	R3HCC1	91	49.880	ENSPCIG00000022718	-	83	54.815	Phascolarctos_cinereus
ENSMICG00000011146	R3HCC1	96	34.940	ENSPFOG00000022301	r3hcc1	90	35.349	Poecilia_formosa
ENSMICG00000011146	R3HCC1	96	34.940	ENSPLAG00000010794	r3hcc1	90	34.940	Poecilia_latipinna
ENSMICG00000011146	R3HCC1	96	34.940	ENSPMEG00000022515	r3hcc1	90	35.349	Poecilia_mexicana
ENSMICG00000011146	R3HCC1	96	35.593	ENSPREG00000000713	r3hcc1	90	35.593	Poecilia_reticulata
ENSMICG00000011146	R3HCC1	87	83.498	ENSPPYG00000018436	R3HCC1	100	83.251	Pongo_abelii
ENSMICG00000011146	R3HCC1	74	85.714	ENSPCAG00000012229	R3HCC1	76	85.714	Procavia_capensis
ENSMICG00000011146	R3HCC1	100	94.710	ENSPCOG00000027554	R3HCC1	100	95.205	Propithecus_coquereli
ENSMICG00000011146	R3HCC1	95	78.829	ENSPVAG00000009829	R3HCC1	96	78.959	Pteropus_vampyrus
ENSMICG00000011146	R3HCC1	93	36.828	ENSPNAG00000023875	r3hcc1	99	36.290	Pygocentrus_nattereri
ENSMICG00000011146	R3HCC1	95	65.244	ENSRNOG00000016777	AABR07018321.1	83	65.726	Rattus_norvegicus
ENSMICG00000011146	R3HCC1	100	85.176	ENSRBIG00000028045	R3HCC1	100	84.673	Rhinopithecus_bieti
ENSMICG00000011146	R3HCC1	100	85.176	ENSRROG00000031126	R3HCC1	100	84.673	Rhinopithecus_roxellana
ENSMICG00000011146	R3HCC1	100	82.663	ENSSBOG00000022590	R3HCC1	100	82.727	Saimiri_boliviensis_boliviensis
ENSMICG00000011146	R3HCC1	92	52.928	ENSSHAG00000016526	-	98	53.153	Sarcophilus_harrisii
ENSMICG00000011146	R3HCC1	96	32.737	ENSSFOG00015013507	r3hcc1	98	36.500	Scleropages_formosus
ENSMICG00000011146	R3HCC1	90	32.346	ENSSMAG00000008647	r3hcc1	98	32.536	Scophthalmus_maximus
ENSMICG00000011146	R3HCC1	91	33.261	ENSSDUG00000022786	r3hcc1	97	33.477	Seriola_dumerili
ENSMICG00000011146	R3HCC1	65	46.154	ENSSLDG00000019031	r3hcc1	72	44.966	Seriola_lalandi_dorsalis
ENSMICG00000011146	R3HCC1	67	84.466	ENSSARG00000013514	-	70	80.420	Sorex_araneus
ENSMICG00000011146	R3HCC1	93	34.474	ENSSPAG00000013497	r3hcc1	97	33.933	Stegastes_partitus
ENSMICG00000011146	R3HCC1	95	78.348	ENSSSCG00000039915	-	95	78.271	Sus_scrofa
ENSMICG00000011146	R3HCC1	93	71.494	ENSSSCG00000037347	-	89	71.330	Sus_scrofa
ENSMICG00000011146	R3HCC1	95	33.582	ENSTRUG00000015880	r3hcc1	98	32.412	Takifugu_rubripes
ENSMICG00000011146	R3HCC1	93	72.540	ENSTTRG00000012247	R3HCC1	98	70.379	Tursiops_truncatus
ENSMICG00000011146	R3HCC1	93	78.851	ENSUAMG00000007344	R3HCC1	99	77.931	Ursus_americanus
ENSMICG00000011146	R3HCC1	98	74.891	ENSVVUG00000005056	R3HCC1	97	75.730	Vulpes_vulpes
ENSMICG00000011146	R3HCC1	92	35.162	ENSXCOG00000017626	r3hcc1	88	35.411	Xiphophorus_couchianus
ENSMICG00000011146	R3HCC1	96	35.561	ENSXMAG00000018375	r3hcc1	91	36.126	Xiphophorus_maculatus