EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012002 (Gene tree)
Gene ID: 105855251
Gene Symbol: RAB30
Alias: -
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 78528 bases
Position: chr5:62852607-62931134
Accession: 105855251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024523	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSMICP00000046095	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000053490	RAB30-201	3024	XM_012736118	ENSMICP00000024523	203 (aa)	XP_012591572	UPI000002356C
ENSMICT00000059866	RAB30-202	4127	XM_012736120	ENSMICP00000046095	203 (aa)	XP_012591574	UPI000002356C
ENSMICT00000011998	RAB30-203	528	-	ENSMICP00000010926	175 (aa)	-	UPI00004E5BDA

Gene Model

Click here to download ENSMICG00000012002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012002	RAB30	76	42.857	ENSMICG00000002882	RAB31	79	42.857
ENSMICG00000012002	RAB30	82	50.602	ENSMICG00000012587	RAB1A	81	50.602
ENSMICG00000012002	RAB30	79	42.857	ENSMICG00000031565	RAB6A	77	42.857
ENSMICG00000012002	RAB30	89	46.703	ENSMICG00000030661	RAB12	75	47.222
ENSMICG00000012002	RAB30	81	51.176	ENSMICG00000034851	RAB33A	72	51.176
ENSMICG00000012002	RAB30	81	33.143	ENSMICG00000000653	-	76	33.143
ENSMICG00000012002	RAB30	81	47.059	ENSMICG00000034809	-	74	47.059
ENSMICG00000012002	RAB30	77	35.000	ENSMICG00000016913	RAB34	62	35.000
ENSMICG00000012002	RAB30	78	48.447	ENSMICG00000044410	RAB39B	76	48.447
ENSMICG00000012002	RAB30	83	47.929	ENSMICG00000017280	RAB18	82	47.929
ENSMICG00000012002	RAB30	79	41.615	ENSMICG00000049590	RAB6B	77	41.615
ENSMICG00000012002	RAB30	91	39.459	ENSMICG00000041608	RAB5C	83	39.459
ENSMICG00000012002	RAB30	97	39.524	ENSMICG00000034065	-	96	39.524
ENSMICG00000012002	RAB30	86	34.463	ENSMICG00000031301	-	74	34.463
ENSMICG00000012002	RAB30	81	33.133	ENSMICG00000049226	MRAS	79	33.133
ENSMICG00000012002	RAB30	81	33.728	ENSMICG00000006266	RERG	82	33.728
ENSMICG00000012002	RAB30	75	31.013	ENSMICG00000027424	DNAJC27	89	31.013
ENSMICG00000012002	RAB30	83	42.857	ENSMICG00000011086	RAB5B	78	42.857
ENSMICG00000012002	RAB30	82	50.000	ENSMICG00000029171	RAB1B	83	50.000
ENSMICG00000012002	RAB30	72	32.653	ENSMICG00000033790	RHEB	92	32.653
ENSMICG00000012002	RAB30	76	33.951	ENSMICG00000014668	REM1	54	31.902
ENSMICG00000012002	RAB30	80	49.383	ENSMICG00000010340	-	80	49.383
ENSMICG00000012002	RAB30	87	38.068	ENSMICG00000014037	RAB23	74	38.068
ENSMICG00000012002	RAB30	79	40.361	ENSMICG00000003057	RAB9B	82	40.361
ENSMICG00000012002	RAB30	95	38.889	ENSMICG00000041433	-	97	38.889
ENSMICG00000012002	RAB30	86	50.286	ENSMICG00000047356	RAB35	86	50.286
ENSMICG00000012002	RAB30	95	35.071	ENSMICG00000015683	RAB36	67	35.071
ENSMICG00000012002	RAB30	89	33.516	ENSMICG00000001474	CASC1	93	33.516
ENSMICG00000012002	RAB30	76	41.250	ENSMICG00000038752	-	80	41.250
ENSMICG00000012002	RAB30	80	41.718	ENSMICG00000008382	-	84	41.718
ENSMICG00000012002	RAB30	89	34.426	ENSMICG00000006472	HRAS	94	34.426
ENSMICG00000012002	RAB30	90	42.391	ENSMICG00000034540	RAB2A	87	42.391
ENSMICG00000012002	RAB30	97	40.580	ENSMICG00000002230	RAB25	96	40.580
ENSMICG00000012002	RAB30	71	34.932	ENSMICG00000036237	-	86	36.076
ENSMICG00000012002	RAB30	86	42.529	ENSMICG00000013101	RAB15	82	42.529
ENSMICG00000012002	RAB30	89	40.556	ENSMICG00000003350	RAB14	83	43.478
ENSMICG00000012002	RAB30	86	43.678	ENSMICG00000049130	RAB5A	81	43.678
ENSMICG00000012002	RAB30	79	41.916	ENSMICG00000029915	-	77	41.916
ENSMICG00000012002	RAB30	97	37.981	ENSMICG00000041504	RAB11A	96	37.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012002	RAB30	100	100.000	ENSG00000137502	RAB30	100	100.000	Homo_sapiens
ENSMICG00000012002	RAB30	100	86.207	ENSAPOG00000022625	rab30	100	86.207	Acanthochromis_polyacanthus
ENSMICG00000012002	RAB30	100	100.000	ENSAMEG00000005231	RAB30	100	100.000	Ailuropoda_melanoleuca
ENSMICG00000012002	RAB30	95	86.010	ENSAOCG00000012556	rab30	69	86.010	Amphiprion_ocellaris
ENSMICG00000012002	RAB30	100	86.207	ENSAPEG00000012044	rab30	100	86.207	Amphiprion_percula
ENSMICG00000012002	RAB30	100	86.207	ENSATEG00000010475	rab30	100	86.207	Anabas_testudineus
ENSMICG00000012002	RAB30	100	98.030	ENSACAG00000001098	RAB30	100	98.030	Anolis_carolinensis
ENSMICG00000012002	RAB30	100	100.000	ENSANAG00000029292	RAB30	100	100.000	Aotus_nancymaae
ENSMICG00000012002	RAB30	100	86.700	ENSACLG00000023526	rab30	100	86.700	Astatotilapia_calliptera
ENSMICG00000012002	RAB30	100	85.222	ENSAMXG00000009935	rab30	82	85.222	Astyanax_mexicanus
ENSMICG00000012002	RAB30	100	100.000	ENSBTAG00000002417	RAB30	100	100.000	Bos_taurus
ENSMICG00000012002	RAB30	85	63.218	WBGene00004282	rab-30	81	63.218	Caenorhabditis_elegans
ENSMICG00000012002	RAB30	100	100.000	ENSCJAG00000041773	RAB30	100	100.000	Callithrix_jacchus
ENSMICG00000012002	RAB30	100	100.000	ENSCAFG00000004616	RAB30	100	100.000	Canis_familiaris
ENSMICG00000012002	RAB30	100	100.000	ENSCAFG00020017865	RAB30	100	100.000	Canis_lupus_dingo
ENSMICG00000012002	RAB30	100	100.000	ENSCHIG00000020601	RAB30	100	100.000	Capra_hircus
ENSMICG00000012002	RAB30	100	100.000	ENSTSYG00000009392	RAB30	100	100.000	Carlito_syrichta
ENSMICG00000012002	RAB30	100	100.000	ENSCAPG00000009331	RAB30	100	100.000	Cavia_aperea
ENSMICG00000012002	RAB30	100	100.000	ENSCPOG00000005047	RAB30	100	100.000	Cavia_porcellus
ENSMICG00000012002	RAB30	100	100.000	ENSCCAG00000026824	RAB30	100	100.000	Cebus_capucinus
ENSMICG00000012002	RAB30	100	100.000	ENSCATG00000040441	RAB30	100	100.000	Cercocebus_atys
ENSMICG00000012002	RAB30	100	100.000	ENSCLAG00000014030	RAB30	100	100.000	Chinchilla_lanigera
ENSMICG00000012002	RAB30	100	100.000	ENSCSAG00000003704	RAB30	100	100.000	Chlorocebus_sabaeus
ENSMICG00000012002	RAB30	100	97.537	ENSCPBG00000006855	RAB30	100	97.537	Chrysemys_picta_bellii
ENSMICG00000012002	RAB30	100	99.507	ENSCANG00000022240	RAB30	100	99.507	Colobus_angolensis_palliatus
ENSMICG00000012002	RAB30	100	100.000	ENSCGRG00001021787	Rab30	100	100.000	Cricetulus_griseus_chok1gshd
ENSMICG00000012002	RAB30	100	100.000	ENSCGRG00000014842	Rab30	100	100.000	Cricetulus_griseus_crigri
ENSMICG00000012002	RAB30	100	85.714	ENSCSEG00000007292	rab30	100	85.714	Cynoglossus_semilaevis
ENSMICG00000012002	RAB30	100	85.222	ENSCVAG00000018085	rab30	100	85.222	Cyprinodon_variegatus
ENSMICG00000012002	RAB30	99	85.572	ENSDARG00000037884	rab30	100	85.572	Danio_rerio
ENSMICG00000012002	RAB30	100	100.000	ENSDNOG00000039115	RAB30	100	100.000	Dasypus_novemcinctus
ENSMICG00000012002	RAB30	100	97.044	ENSDORG00000015066	-	100	97.044	Dipodomys_ordii
ENSMICG00000012002	RAB30	100	99.015	ENSDORG00000010504	-	100	99.015	Dipodomys_ordii
ENSMICG00000012002	RAB30	85	73.988	FBgn0031882	Rab30	87	67.692	Drosophila_melanogaster
ENSMICG00000012002	RAB30	100	100.000	ENSEASG00005012754	RAB30	100	100.000	Equus_asinus_asinus
ENSMICG00000012002	RAB30	100	100.000	ENSECAG00000022769	RAB30	100	100.000	Equus_caballus
ENSMICG00000012002	RAB30	100	84.314	ENSELUG00000022997	rab30	100	85.149	Esox_lucius
ENSMICG00000012002	RAB30	100	100.000	ENSFCAG00000014416	RAB30	100	100.000	Felis_catus
ENSMICG00000012002	RAB30	100	98.522	ENSFALG00000007765	RAB30	100	98.522	Ficedula_albicollis
ENSMICG00000012002	RAB30	100	100.000	ENSFDAG00000014521	RAB30	100	100.000	Fukomys_damarensis
ENSMICG00000012002	RAB30	100	85.714	ENSFHEG00000013918	rab30	100	85.714	Fundulus_heteroclitus
ENSMICG00000012002	RAB30	100	81.773	ENSGMOG00000002552	rab30	100	81.773	Gadus_morhua
ENSMICG00000012002	RAB30	100	98.522	ENSGALG00000017248	RAB30	100	98.522	Gallus_gallus
ENSMICG00000012002	RAB30	100	85.222	ENSGAFG00000020309	rab30	100	85.222	Gambusia_affinis
ENSMICG00000012002	RAB30	100	87.192	ENSGACG00000012006	rab30	100	87.192	Gasterosteus_aculeatus
ENSMICG00000012002	RAB30	100	97.537	ENSGAGG00000004474	RAB30	100	97.537	Gopherus_agassizii
ENSMICG00000012002	RAB30	100	100.000	ENSGGOG00000017157	RAB30	100	100.000	Gorilla_gorilla
ENSMICG00000012002	RAB30	100	86.700	ENSHBUG00000000993	rab30	93	86.700	Haplochromis_burtoni
ENSMICG00000012002	RAB30	100	100.000	ENSHGLG00000002759	RAB30	100	100.000	Heterocephalus_glaber_female
ENSMICG00000012002	RAB30	100	100.000	ENSHGLG00100001213	RAB30	100	100.000	Heterocephalus_glaber_male
ENSMICG00000012002	RAB30	66	89.474	ENSHCOG00000010707	rab30	71	89.474	Hippocampus_comes
ENSMICG00000012002	RAB30	99	87.562	ENSIPUG00000021010	Rab30	100	87.562	Ictalurus_punctatus
ENSMICG00000012002	RAB30	100	100.000	ENSSTOG00000020966	RAB30	100	100.000	Ictidomys_tridecemlineatus
ENSMICG00000012002	RAB30	100	100.000	ENSJJAG00000020064	Rab30	100	100.000	Jaculus_jaculus
ENSMICG00000012002	RAB30	100	85.714	ENSKMAG00000004439	rab30	100	85.714	Kryptolebias_marmoratus
ENSMICG00000012002	RAB30	100	86.207	ENSLBEG00000001146	rab30	100	86.207	Labrus_bergylta
ENSMICG00000012002	RAB30	100	91.626	ENSLACG00000006407	RAB30	100	91.626	Latimeria_chalumnae
ENSMICG00000012002	RAB30	100	89.163	ENSLOCG00000005884	rab30	100	89.163	Lepisosteus_oculatus
ENSMICG00000012002	RAB30	100	99.507	ENSLAFG00000010711	RAB30	100	99.507	Loxodonta_africana
ENSMICG00000012002	RAB30	100	100.000	ENSMFAG00000033119	RAB30	100	100.000	Macaca_fascicularis
ENSMICG00000012002	RAB30	100	100.000	ENSMMUG00000007842	RAB30	100	100.000	Macaca_mulatta
ENSMICG00000012002	RAB30	100	100.000	ENSMNEG00000037406	RAB30	100	100.000	Macaca_nemestrina
ENSMICG00000012002	RAB30	100	100.000	ENSMLEG00000039496	RAB30	100	100.000	Mandrillus_leucophaeus
ENSMICG00000012002	RAB30	100	86.207	ENSMAMG00000011973	rab30	100	86.207	Mastacembelus_armatus
ENSMICG00000012002	RAB30	100	86.700	ENSMZEG00005024032	rab30	93	86.700	Maylandia_zebra
ENSMICG00000012002	RAB30	100	97.549	ENSMGAG00000015230	RAB30	100	97.549	Meleagris_gallopavo
ENSMICG00000012002	RAB30	100	100.000	ENSMAUG00000008179	Rab30	100	100.000	Mesocricetus_auratus
ENSMICG00000012002	RAB30	100	100.000	ENSMOCG00000009821	-	100	100.000	Microtus_ochrogaster
ENSMICG00000012002	RAB30	100	85.714	ENSMMOG00000000304	rab30	100	85.714	Mola_mola
ENSMICG00000012002	RAB30	100	99.507	ENSMODG00000004506	RAB30	100	99.507	Monodelphis_domestica
ENSMICG00000012002	RAB30	100	86.700	ENSMALG00000010438	rab30	100	86.700	Monopterus_albus
ENSMICG00000012002	RAB30	100	99.507	MGP_CAROLIEiJ_G0029992	Rab30	100	99.507	Mus_caroli
ENSMICG00000012002	RAB30	100	100.000	ENSMUSG00000030643	Rab30	100	100.000	Mus_musculus
ENSMICG00000012002	RAB30	100	100.000	MGP_PahariEiJ_G0013212	Rab30	100	100.000	Mus_pahari
ENSMICG00000012002	RAB30	100	100.000	MGP_SPRETEiJ_G0031102	Rab30	100	100.000	Mus_spretus
ENSMICG00000012002	RAB30	100	100.000	ENSMPUG00000008088	RAB30	100	100.000	Mustela_putorius_furo
ENSMICG00000012002	RAB30	100	98.522	ENSMLUG00000006552	RAB30	100	98.522	Myotis_lucifugus
ENSMICG00000012002	RAB30	100	100.000	ENSNGAG00000018930	Rab30	100	100.000	Nannospalax_galili
ENSMICG00000012002	RAB30	100	86.700	ENSNBRG00000002082	rab30	93	86.700	Neolamprologus_brichardi
ENSMICG00000012002	RAB30	100	100.000	ENSNLEG00000029364	RAB30	100	100.000	Nomascus_leucogenys
ENSMICG00000012002	RAB30	100	97.537	ENSMEUG00000012886	RAB30	100	97.537	Notamacropus_eugenii
ENSMICG00000012002	RAB30	59	100.000	ENSOPRG00000007511	RAB30	100	100.000	Ochotona_princeps
ENSMICG00000012002	RAB30	100	100.000	ENSODEG00000003833	RAB30	100	100.000	Octodon_degus
ENSMICG00000012002	RAB30	100	86.700	ENSONIG00000005708	rab30	100	86.700	Oreochromis_niloticus
ENSMICG00000012002	RAB30	100	100.000	ENSOCUG00000007580	RAB30	100	100.000	Oryctolagus_cuniculus
ENSMICG00000012002	RAB30	100	85.714	ENSORLG00000029812	rab30	100	85.714	Oryzias_latipes
ENSMICG00000012002	RAB30	100	85.714	ENSORLG00020015288	rab30	100	85.714	Oryzias_latipes_hni
ENSMICG00000012002	RAB30	100	85.714	ENSORLG00015020972	rab30	100	85.714	Oryzias_latipes_hsok
ENSMICG00000012002	RAB30	100	85.222	ENSOMEG00000001613	rab30	100	85.222	Oryzias_melastigma
ENSMICG00000012002	RAB30	100	100.000	ENSOGAG00000033189	RAB30	100	100.000	Otolemur_garnettii
ENSMICG00000012002	RAB30	100	100.000	ENSOARG00000005688	RAB30	100	100.000	Ovis_aries
ENSMICG00000012002	RAB30	100	100.000	ENSPPAG00000031604	RAB30	100	100.000	Pan_paniscus
ENSMICG00000012002	RAB30	100	100.000	ENSPPRG00000023881	RAB30	100	100.000	Panthera_pardus
ENSMICG00000012002	RAB30	100	100.000	ENSPTIG00000009836	RAB30	100	100.000	Panthera_tigris_altaica
ENSMICG00000012002	RAB30	100	100.000	ENSPTRG00000004125	RAB30	100	100.000	Pan_troglodytes
ENSMICG00000012002	RAB30	100	100.000	ENSPANG00000003974	RAB30	100	100.000	Papio_anubis
ENSMICG00000012002	RAB30	99	88.614	ENSPKIG00000015202	rab30	99	88.614	Paramormyrops_kingsleyae
ENSMICG00000012002	RAB30	100	96.552	ENSPSIG00000003078	RAB30	100	96.552	Pelodiscus_sinensis
ENSMICG00000012002	RAB30	100	76.293	ENSPMGG00000016093	rab30	100	76.293	Periophthalmus_magnuspinnatus
ENSMICG00000012002	RAB30	100	100.000	ENSPEMG00000023854	Rab30	100	100.000	Peromyscus_maniculatus_bairdii
ENSMICG00000012002	RAB30	99	67.619	ENSPMAG00000006105	rab30	99	67.619	Petromyzon_marinus
ENSMICG00000012002	RAB30	100	99.507	ENSPCIG00000027547	RAB30	94	99.507	Phascolarctos_cinereus
ENSMICG00000012002	RAB30	100	85.714	ENSPFOG00000005479	rab30	100	85.714	Poecilia_formosa
ENSMICG00000012002	RAB30	100	85.714	ENSPLAG00000015383	rab30	100	85.714	Poecilia_latipinna
ENSMICG00000012002	RAB30	100	85.714	ENSPMEG00000009701	rab30	100	85.714	Poecilia_mexicana
ENSMICG00000012002	RAB30	100	85.714	ENSPREG00000014634	rab30	100	85.714	Poecilia_reticulata
ENSMICG00000012002	RAB30	100	100.000	ENSPPYG00000003733	RAB30	100	100.000	Pongo_abelii
ENSMICG00000012002	RAB30	100	99.507	ENSPCAG00000000574	RAB30	100	99.507	Procavia_capensis
ENSMICG00000012002	RAB30	100	100.000	ENSPCOG00000017316	RAB30	100	100.000	Propithecus_coquereli
ENSMICG00000012002	RAB30	100	100.000	ENSPVAG00000005455	RAB30	100	100.000	Pteropus_vampyrus
ENSMICG00000012002	RAB30	100	86.207	ENSPNYG00000009728	rab30	93	86.207	Pundamilia_nyererei
ENSMICG00000012002	RAB30	99	87.065	ENSPNAG00000010760	rab30	100	87.065	Pygocentrus_nattereri
ENSMICG00000012002	RAB30	100	100.000	ENSRNOG00000010224	Rab30	100	100.000	Rattus_norvegicus
ENSMICG00000012002	RAB30	100	100.000	ENSRBIG00000039227	RAB30	100	100.000	Rhinopithecus_bieti
ENSMICG00000012002	RAB30	100	100.000	ENSRROG00000031260	RAB30	100	100.000	Rhinopithecus_roxellana
ENSMICG00000012002	RAB30	100	100.000	ENSSBOG00000026403	RAB30	100	100.000	Saimiri_boliviensis_boliviensis
ENSMICG00000012002	RAB30	100	98.058	ENSSHAG00000018081	RAB30	100	98.058	Sarcophilus_harrisii
ENSMICG00000012002	RAB30	100	85.714	ENSSMAG00000002500	rab30	100	85.714	Scophthalmus_maximus
ENSMICG00000012002	RAB30	100	86.700	ENSSDUG00000013325	rab30	100	86.700	Seriola_dumerili
ENSMICG00000012002	RAB30	100	86.700	ENSSLDG00000022533	rab30	100	86.700	Seriola_lalandi_dorsalis
ENSMICG00000012002	RAB30	100	97.044	ENSSPUG00000006349	RAB30	100	97.044	Sphenodon_punctatus
ENSMICG00000012002	RAB30	100	86.700	ENSSPAG00000013422	rab30	100	86.700	Stegastes_partitus
ENSMICG00000012002	RAB30	100	100.000	ENSSSCG00000014900	RAB30	100	100.000	Sus_scrofa
ENSMICG00000012002	RAB30	100	98.522	ENSTGUG00000012941	RAB30	100	98.522	Taeniopygia_guttata
ENSMICG00000012002	RAB30	99	86.070	ENSTRUG00000022559	rab30	99	86.070	Takifugu_rubripes
ENSMICG00000012002	RAB30	100	100.000	ENSTBEG00000009832	RAB30	100	100.000	Tupaia_belangeri
ENSMICG00000012002	RAB30	100	100.000	ENSTTRG00000006100	RAB30	100	100.000	Tursiops_truncatus
ENSMICG00000012002	RAB30	100	100.000	ENSUAMG00000009326	RAB30	100	100.000	Ursus_americanus
ENSMICG00000012002	RAB30	100	100.000	ENSUMAG00000023572	RAB30	100	100.000	Ursus_maritimus
ENSMICG00000012002	RAB30	100	100.000	ENSVVUG00000017471	RAB30	100	100.000	Vulpes_vulpes
ENSMICG00000012002	RAB30	100	93.103	ENSXETG00000013633	rab30	100	93.103	Xenopus_tropicalis
ENSMICG00000012002	RAB30	100	85.714	ENSXMAG00000025848	rab30	100	85.714	Xiphophorus_maculatus