EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012080 (Gene tree)
Gene ID: 105859404
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 44166 bases
Position: chr3:24395459-24439624
Accession: 105859404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000010990	RRM_1	PF00076.22	3.7e-14	1	1
ENSMICP00000050038	RRM_1	PF00076.22	4.5e-14	1	1
ENSMICP00000041891	RRM_1	PF00076.22	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000064123	SLIRP-203	276	-	ENSMICP00000041891	91 (aa)	-	UPI000C2EAAEB
ENSMICT00000012073	SLIRP-202	324	XM_012743195	ENSMICP00000010990	107 (aa)	XP_012598649	UPI000C2EBF71
ENSMICT00000064389	SLIRP-201	351	-	ENSMICP00000050038	117 (aa)	-	UPI000C2ED13F

Gene Model

Click here to download ENSMICG00000012080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012080	SLIRP	73	31.707	ENSMICG00000027030	HNRNPAB	56	32.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012080	SLIRP	88	73.636	ENSG00000119705	SLIRP	95	81.944	Homo_sapiens
ENSMICG00000012080	SLIRP	65	60.000	ENSAPOG00000001298	slirp	70	60.000	Acanthochromis_polyacanthus
ENSMICG00000012080	SLIRP	85	76.923	ENSAMEG00000003975	SLIRP	100	76.923	Ailuropoda_melanoleuca
ENSMICG00000012080	SLIRP	66	57.746	ENSACIG00000023083	slirp	76	55.844	Amphilophus_citrinellus
ENSMICG00000012080	SLIRP	66	61.972	ENSAOCG00000006342	slirp	72	61.972	Amphiprion_ocellaris
ENSMICG00000012080	SLIRP	76	55.952	ENSAPEG00000015917	slirp	72	61.972	Amphiprion_percula
ENSMICG00000012080	SLIRP	76	55.952	ENSAPEG00000015719	-	72	61.972	Amphiprion_percula
ENSMICG00000012080	SLIRP	67	58.333	ENSATEG00000013525	slirp	72	58.333	Anabas_testudineus
ENSMICG00000012080	SLIRP	67	55.556	ENSAMXG00000018693	slirp	72	55.556	Astyanax_mexicanus
ENSMICG00000012080	SLIRP	100	75.000	ENSCJAG00000016946	SLIRP	96	80.899	Callithrix_jacchus
ENSMICG00000012080	SLIRP	100	68.468	ENSCAFG00020015876	-	100	68.468	Canis_lupus_dingo
ENSMICG00000012080	SLIRP	100	74.194	ENSCCAG00000030130	SLIRP	100	74.194	Cebus_capucinus
ENSMICG00000012080	SLIRP	100	69.231	ENSCATG00000036327	SLIRP	96	74.157	Cercocebus_atys
ENSMICG00000012080	SLIRP	90	71.287	ENSCSAG00000011736	SLIRP	100	70.536	Chlorocebus_sabaeus
ENSMICG00000012080	SLIRP	68	57.534	ENSCPBG00000026327	SLIRP	74	57.534	Chrysemys_picta_bellii
ENSMICG00000012080	SLIRP	70	74.667	ENSCANG00000032892	SLIRP	97	71.579	Colobus_angolensis_palliatus
ENSMICG00000012080	SLIRP	100	60.360	ENSCGRG00001024068	Slirp	100	60.360	Cricetulus_griseus_chok1gshd
ENSMICG00000012080	SLIRP	100	60.360	ENSCGRG00000017440	Slirp	100	60.360	Cricetulus_griseus_crigri
ENSMICG00000012080	SLIRP	85	52.747	ENSCSEG00000015766	slirp	84	52.747	Cynoglossus_semilaevis
ENSMICG00000012080	SLIRP	72	62.338	ENSCVAG00000012504	slirp	76	62.338	Cyprinodon_variegatus
ENSMICG00000012080	SLIRP	79	52.874	ENSDARG00000097753	slirp	84	52.874	Danio_rerio
ENSMICG00000012080	SLIRP	81	68.132	ENSDNOG00000007721	SLIRP	100	63.063	Dasypus_novemcinctus
ENSMICG00000012080	SLIRP	100	66.667	ENSDORG00000012379	Slirp	100	66.667	Dipodomys_ordii
ENSMICG00000012080	SLIRP	90	65.979	ENSETEG00000010345	SLIRP	100	65.741	Echinops_telfairi
ENSMICG00000012080	SLIRP	100	73.874	ENSEASG00005020193	SLIRP	100	73.874	Equus_asinus_asinus
ENSMICG00000012080	SLIRP	92	57.426	ENSEEUG00000007257	SLIRP	100	57.426	Erinaceus_europaeus
ENSMICG00000012080	SLIRP	75	51.807	ENSELUG00000016800	slirp	82	51.807	Esox_lucius
ENSMICG00000012080	SLIRP	83	78.652	ENSFCAG00000036326	SLIRP	91	78.652	Felis_catus
ENSMICG00000012080	SLIRP	65	51.429	ENSFALG00000012583	SLIRP	93	43.810	Ficedula_albicollis
ENSMICG00000012080	SLIRP	95	64.865	ENSFDAG00000008347	SLIRP	98	64.865	Fukomys_damarensis
ENSMICG00000012080	SLIRP	64	54.237	ENSFHEG00000004709	slirp	73	56.716	Fundulus_heteroclitus
ENSMICG00000012080	SLIRP	67	55.556	ENSGMOG00000016948	slirp	69	55.556	Gadus_morhua
ENSMICG00000012080	SLIRP	76	49.383	ENSGALG00000031238	SLIRP	89	51.724	Gallus_gallus
ENSMICG00000012080	SLIRP	64	63.768	ENSGAFG00000010998	slirp	89	46.154	Gambusia_affinis
ENSMICG00000012080	SLIRP	66	61.972	ENSGACG00000020137	slirp	83	61.972	Gasterosteus_aculeatus
ENSMICG00000012080	SLIRP	80	55.556	ENSGAGG00000009953	SLIRP	62	55.556	Gopherus_agassizii
ENSMICG00000012080	SLIRP	88	73.636	ENSGGOG00000011059	-	96	77.528	Gorilla_gorilla
ENSMICG00000012080	SLIRP	100	63.063	ENSHGLG00000018491	SLIRP	100	63.063	Heterocephalus_glaber_female
ENSMICG00000012080	SLIRP	100	63.063	ENSHGLG00100014153	SLIRP	100	63.063	Heterocephalus_glaber_male
ENSMICG00000012080	SLIRP	80	56.180	ENSHCOG00000006795	slirp	90	56.180	Hippocampus_comes
ENSMICG00000012080	SLIRP	67	51.389	ENSIPUG00000010214	SLIRP	72	51.389	Ictalurus_punctatus
ENSMICG00000012080	SLIRP	90	73.000	ENSSTOG00000034316	SLIRP	100	72.072	Ictidomys_tridecemlineatus
ENSMICG00000012080	SLIRP	80	45.745	ENSKMAG00000002038	slirp	90	45.745	Kryptolebias_marmoratus
ENSMICG00000012080	SLIRP	65	57.143	ENSLBEG00000007564	slirp	70	57.143	Labrus_bergylta
ENSMICG00000012080	SLIRP	81	52.222	ENSLACG00000013434	SLIRP	87	52.222	Latimeria_chalumnae
ENSMICG00000012080	SLIRP	91	71.698	ENSMFAG00000042960	SLIRP	96	74.157	Macaca_fascicularis
ENSMICG00000012080	SLIRP	91	68.807	ENSMMUG00000029256	SLIRP	96	75.281	Macaca_mulatta
ENSMICG00000012080	SLIRP	91	71.698	ENSMNEG00000028921	SLIRP	96	74.157	Macaca_nemestrina
ENSMICG00000012080	SLIRP	100	69.231	ENSMLEG00000043644	SLIRP	100	69.231	Mandrillus_leucophaeus
ENSMICG00000012080	SLIRP	65	57.143	ENSMZEG00005004617	slirp	89	42.222	Maylandia_zebra
ENSMICG00000012080	SLIRP	100	63.063	ENSMAUG00000003857	Slirp	100	63.063	Mesocricetus_auratus
ENSMICG00000012080	SLIRP	98	65.138	ENSMOCG00000016019	Slirp	97	65.138	Microtus_ochrogaster
ENSMICG00000012080	SLIRP	66	57.746	ENSMMOG00000018268	slirp	71	57.746	Mola_mola
ENSMICG00000012080	SLIRP	65	72.857	ENSMODG00000005207	-	99	72.857	Monodelphis_domestica
ENSMICG00000012080	SLIRP	97	40.741	ENSMALG00000012581	slirp	99	40.741	Monopterus_albus
ENSMICG00000012080	SLIRP	97	67.593	MGP_CAROLIEiJ_G0017995	Slirp	100	67.593	Mus_caroli
ENSMICG00000012080	SLIRP	98	67.890	ENSMUSG00000021040	Slirp	95	72.340	Mus_musculus
ENSMICG00000012080	SLIRP	98	67.890	MGP_SPRETEiJ_G0018840	Slirp	97	67.890	Mus_spretus
ENSMICG00000012080	SLIRP	85	71.579	ENSMLUG00000024998	-	100	69.369	Myotis_lucifugus
ENSMICG00000012080	SLIRP	90	69.000	ENSMLUG00000029544	-	100	66.667	Myotis_lucifugus
ENSMICG00000012080	SLIRP	97	68.519	ENSNGAG00000016363	Slirp	100	68.519	Nannospalax_galili
ENSMICG00000012080	SLIRP	100	70.968	ENSNLEG00000032459	-	95	76.136	Nomascus_leucogenys
ENSMICG00000012080	SLIRP	92	66.019	ENSNLEG00000027238	-	92	72.500	Nomascus_leucogenys
ENSMICG00000012080	SLIRP	98	66.972	ENSODEG00000012580	SLIRP	99	70.330	Octodon_degus
ENSMICG00000012080	SLIRP	80	50.562	ENSONIG00000011692	slirp	89	50.562	Oreochromis_niloticus
ENSMICG00000012080	SLIRP	87	61.290	ENSOANG00000022366	SLIRP	84	61.290	Ornithorhynchus_anatinus
ENSMICG00000012080	SLIRP	79	52.809	ENSORLG00000010761	slirp	69	52.809	Oryzias_latipes
ENSMICG00000012080	SLIRP	79	53.933	ENSORLG00020022188	slirp	89	53.933	Oryzias_latipes_hni
ENSMICG00000012080	SLIRP	99	47.273	ENSORLG00015020171	slirp	100	47.273	Oryzias_latipes_hsok
ENSMICG00000012080	SLIRP	67	58.333	ENSOMEG00000019321	slirp	76	57.895	Oryzias_melastigma
ENSMICG00000012080	SLIRP	88	73.636	ENSPPAG00000040710	-	96	77.528	Pan_paniscus
ENSMICG00000012080	SLIRP	83	78.652	ENSPPRG00000014350	SLIRP	91	78.652	Panthera_pardus
ENSMICG00000012080	SLIRP	83	78.652	ENSPTIG00000014196	SLIRP	91	78.652	Panthera_tigris_altaica
ENSMICG00000012080	SLIRP	88	73.636	ENSPTRG00000030691	SLIRP	96	77.528	Pan_troglodytes
ENSMICG00000012080	SLIRP	100	71.795	ENSPANG00000026323	SLIRP	100	71.795	Papio_anubis
ENSMICG00000012080	SLIRP	59	58.730	ENSPKIG00000008831	slirp	57	63.793	Paramormyrops_kingsleyae
ENSMICG00000012080	SLIRP	67	62.500	ENSPMGG00000010541	slirp	83	62.500	Periophthalmus_magnuspinnatus
ENSMICG00000012080	SLIRP	88	64.646	ENSPEMG00000013234	Slirp	96	61.818	Peromyscus_maniculatus_bairdii
ENSMICG00000012080	SLIRP	59	50.794	ENSPMAG00000009355	slirp	70	50.794	Petromyzon_marinus
ENSMICG00000012080	SLIRP	75	68.293	ENSPCIG00000026842	-	91	65.882	Phascolarctos_cinereus
ENSMICG00000012080	SLIRP	64	63.768	ENSPFOG00000006758	slirp	88	45.556	Poecilia_formosa
ENSMICG00000012080	SLIRP	81	55.556	ENSPLAG00000011140	slirp	89	55.556	Poecilia_latipinna
ENSMICG00000012080	SLIRP	64	63.768	ENSPMEG00000019535	slirp	88	45.556	Poecilia_mexicana
ENSMICG00000012080	SLIRP	64	63.768	ENSPREG00000011673	slirp	88	44.944	Poecilia_reticulata
ENSMICG00000012080	SLIRP	88	68.367	ENSPPYG00000006030	SLIRP	97	66.972	Pongo_abelii
ENSMICG00000012080	SLIRP	100	91.589	ENSPCOG00000015159	SLIRP	100	91.589	Propithecus_coquereli
ENSMICG00000012080	SLIRP	66	63.380	ENSPNAG00000008633	slirp	78	61.039	Pygocentrus_nattereri
ENSMICG00000012080	SLIRP	88	65.306	ENSRBIG00000035817	-	100	65.138	Rhinopithecus_bieti
ENSMICG00000012080	SLIRP	72	75.325	ENSRBIG00000032998	-	82	73.034	Rhinopithecus_bieti
ENSMICG00000012080	SLIRP	91	72.642	ENSRBIG00000032222	-	100	71.795	Rhinopithecus_bieti
ENSMICG00000012080	SLIRP	79	68.235	ENSRBIG00000031396	-	96	67.708	Rhinopithecus_bieti
ENSMICG00000012080	SLIRP	72	76.623	ENSRROG00000017133	-	92	75.000	Rhinopithecus_roxellana
ENSMICG00000012080	SLIRP	79	67.059	ENSRROG00000035604	-	96	66.667	Rhinopithecus_roxellana
ENSMICG00000012080	SLIRP	82	70.787	ENSRROG00000041312	-	99	70.000	Rhinopithecus_roxellana
ENSMICG00000012080	SLIRP	91	71.698	ENSRROG00000036656	-	100	70.940	Rhinopithecus_roxellana
ENSMICG00000012080	SLIRP	99	74.797	ENSSBOG00000020014	SLIRP	96	78.652	Saimiri_boliviensis_boliviensis
ENSMICG00000012080	SLIRP	64	67.647	ENSSFOG00015011165	slirp	77	61.842	Scleropages_formosus
ENSMICG00000012080	SLIRP	71	44.737	ENSSMAG00000012930	slirp	88	40.000	Scophthalmus_maximus
ENSMICG00000012080	SLIRP	80	53.333	ENSSDUG00000021883	slirp	59	53.333	Seriola_dumerili
ENSMICG00000012080	SLIRP	93	49.074	ENSSLDG00000023136	slirp	98	49.074	Seriola_lalandi_dorsalis
ENSMICG00000012080	SLIRP	66	53.521	ENSSPUG00000009346	SLIRP	72	53.521	Sphenodon_punctatus
ENSMICG00000012080	SLIRP	70	57.333	ENSSPAG00000013477	slirp	75	57.333	Stegastes_partitus
ENSMICG00000012080	SLIRP	100	72.072	ENSSSCG00000028167	SLIRP	100	72.072	Sus_scrofa
ENSMICG00000012080	SLIRP	64	52.941	ENSTGUG00000012337	SLIRP	87	46.739	Taeniopygia_guttata
ENSMICG00000012080	SLIRP	79	48.315	ENSTRUG00000020127	slirp	88	48.315	Takifugu_rubripes
ENSMICG00000012080	SLIRP	100	72.973	ENSUAMG00000022445	SLIRP	100	72.973	Ursus_americanus
ENSMICG00000012080	SLIRP	100	73.874	ENSUMAG00000007166	SLIRP	100	73.874	Ursus_maritimus
ENSMICG00000012080	SLIRP	100	65.766	ENSVPAG00000001781	SLIRP	100	65.766	Vicugna_pacos
ENSMICG00000012080	SLIRP	86	70.833	ENSVVUG00000004436	SLIRP	100	69.369	Vulpes_vulpes
ENSMICG00000012080	SLIRP	65	55.714	ENSXETG00000030343	SLIRP	79	55.714	Xenopus_tropicalis
ENSMICG00000012080	SLIRP	79	52.809	ENSXCOG00000009422	slirp	89	52.809	Xiphophorus_couchianus
ENSMICG00000012080	SLIRP	81	53.333	ENSXMAG00000015655	slirp	89	53.333	Xiphophorus_maculatus