EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012213 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 6504 bases
Position: chrX:141120794-141127297
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	1	7
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	2	7
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	3	7
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	4	7
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	5	7
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	6	7
ENSMICP00000038224	PUF	PF00806.19	4.3e-62	7	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	1	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	2	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	3	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	4	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	5	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	6	7
ENSMICP00000033966	PUF	PF00806.19	9e-62	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000063417	-	1665	-	ENSMICP00000048716	554 (aa)	-	UPI000C2ED6B4
ENSMICT00000042079	-	3285	-	ENSMICP00000038224	1094 (aa)	-	UPI00085B1588
ENSMICT00000012209	-	3579	-	ENSMICP00000033966	1192 (aa)	-	UPI000C2ECC85
ENSMICT00000040079	-	360	-	ENSMICP00000039071	119 (aa)	-	UPI000C2ECFCF

Gene Model

Click here to download ENSMICG00000012213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012213	-	100	97.383	ENSMICG00000007713	-	99	98.592
ENSMICG00000012213	-	80	84.941	ENSMICG00000011647	PUM2	100	86.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012213	-	100	97.088	ENSG00000134644	PUM1	100	97.917	Homo_sapiens
ENSMICG00000012213	-	100	88.675	ENSAPOG00000021632	pum1	100	90.557	Acanthochromis_polyacanthus
ENSMICG00000012213	-	100	97.691	ENSAMEG00000017656	PUM1	98	96.758	Ailuropoda_melanoleuca
ENSMICG00000012213	-	100	88.434	ENSACIG00000021013	pum1	94	89.904	Amphilophus_citrinellus
ENSMICG00000012213	-	100	88.675	ENSAOCG00000003944	pum1	100	90.557	Amphiprion_ocellaris
ENSMICG00000012213	-	100	88.675	ENSAPEG00000014550	pum1	100	90.557	Amphiprion_percula
ENSMICG00000012213	-	100	88.675	ENSATEG00000016004	pum1	100	90.557	Anabas_testudineus
ENSMICG00000012213	-	100	95.169	ENSAPLG00000009351	PUM1	99	95.451	Anas_platyrhynchos
ENSMICG00000012213	-	100	95.169	ENSACAG00000000682	PUM1	98	93.283	Anolis_carolinensis
ENSMICG00000012213	-	100	96.931	ENSANAG00000027865	PUM1	100	96.931	Aotus_nancymaae
ENSMICG00000012213	-	89	88.193	ENSACLG00000019354	pum1	93	87.740	Astatotilapia_calliptera
ENSMICG00000012213	-	100	89.639	ENSAMXG00000020607	pum1	90	89.639	Astyanax_mexicanus
ENSMICG00000012213	-	100	96.486	ENSBTAG00000018979	PUM1	99	97.887	Bos_taurus
ENSMICG00000012213	-	100	96.931	ENSCJAG00000006035	PUM1	100	96.931	Callithrix_jacchus
ENSMICG00000012213	-	100	95.652	ENSCAFG00000011205	PUM1	99	94.945	Canis_familiaris
ENSMICG00000012213	-	91	94.995	ENSCAFG00020024616	PUM1	99	96.395	Canis_lupus_dingo
ENSMICG00000012213	-	100	96.661	ENSCHIG00000012952	PUM1	100	96.661	Capra_hircus
ENSMICG00000012213	-	99	97.136	ENSTSYG00000008868	PUM1	99	97.183	Carlito_syrichta
ENSMICG00000012213	-	99	96.799	ENSCPOG00000031613	PUM1	99	97.183	Cavia_porcellus
ENSMICG00000012213	-	100	95.894	ENSCATG00000017991	PUM1	99	97.887	Cercocebus_atys
ENSMICG00000012213	-	100	96.480	ENSCLAG00000007662	PUM1	100	96.480	Chinchilla_lanigera
ENSMICG00000012213	-	100	95.894	ENSCSAG00000001028	PUM1	99	96.578	Chlorocebus_sabaeus
ENSMICG00000012213	-	100	94.517	ENSCHOG00000010245	PUM1	93	94.517	Choloepus_hoffmanni
ENSMICG00000012213	-	100	94.946	ENSCPBG00000009288	PUM1	100	94.946	Chrysemys_picta_bellii
ENSMICG00000012213	-	100	97.088	ENSCANG00000042606	PUM1	100	97.022	Colobus_angolensis_palliatus
ENSMICG00000012213	-	99	96.709	ENSCGRG00001024949	Pum1	99	97.183	Cricetulus_griseus_chok1gshd
ENSMICG00000012213	-	99	96.709	ENSCGRG00000014197	Pum1	99	97.183	Cricetulus_griseus_crigri
ENSMICG00000012213	-	89	74.675	ENSCSEG00000015981	pum1	92	90.580	Cynoglossus_semilaevis
ENSMICG00000012213	-	99	72.222	ENSCVAG00000007043	pum1	94	87.500	Cyprinodon_variegatus
ENSMICG00000012213	-	100	89.880	ENSDARG00000099256	pum1	93	89.880	Danio_rerio
ENSMICG00000012213	-	99	96.714	ENSDNOG00000010939	PUM1	99	96.714	Dasypus_novemcinctus
ENSMICG00000012213	-	89	95.648	ENSDORG00000001875	Pum1	100	95.874	Dipodomys_ordii
ENSMICG00000012213	-	87	93.201	ENSETEG00000004355	PUM1	87	91.610	Echinops_telfairi
ENSMICG00000012213	-	99	96.799	ENSEASG00005010813	PUM1	99	96.799	Equus_asinus_asinus
ENSMICG00000012213	-	99	96.799	ENSECAG00000021369	PUM1	99	96.799	Equus_caballus
ENSMICG00000012213	-	80	98.305	ENSEEUG00000003871	PUM1	75	97.546	Erinaceus_europaeus
ENSMICG00000012213	-	100	90.338	ENSELUG00000002409	pum1	99	81.908	Esox_lucius
ENSMICG00000012213	-	100	96.667	ENSFCAG00000010374	PUM1	99	98.319	Felis_catus
ENSMICG00000012213	-	100	95.169	ENSFALG00000001214	PUM1	98	92.295	Ficedula_albicollis
ENSMICG00000012213	-	99	96.799	ENSFDAG00000011319	PUM1	99	97.183	Fukomys_damarensis
ENSMICG00000012213	-	91	88.193	ENSGMOG00000010491	pum1	84	89.663	Gadus_morhua
ENSMICG00000012213	-	100	95.169	ENSGALG00000042598	PUM1	99	95.619	Gallus_gallus
ENSMICG00000012213	-	100	87.952	ENSGAFG00000015617	pum1	100	89.831	Gambusia_affinis
ENSMICG00000012213	-	99	73.179	ENSGACG00000005717	pum1	94	89.663	Gasterosteus_aculeatus
ENSMICG00000012213	-	100	94.928	ENSGAGG00000001290	PUM1	99	95.344	Gopherus_agassizii
ENSMICG00000012213	-	100	97.022	ENSGGOG00000011983	PUM1	100	97.022	Gorilla_gorilla
ENSMICG00000012213	-	100	88.193	ENSHBUG00000018718	pum1	94	87.740	Haplochromis_burtoni
ENSMICG00000012213	-	99	96.630	ENSHGLG00000013819	Pum1	99	96.630	Heterocephalus_glaber_female
ENSMICG00000012213	-	99	96.630	ENSHGLG00100008621	Pum1	99	96.630	Heterocephalus_glaber_male
ENSMICG00000012213	-	100	89.157	ENSIPUG00000020421	pum1	92	89.157	Ictalurus_punctatus
ENSMICG00000012213	-	99	97.136	ENSSTOG00000010757	PUM1	99	97.887	Ictidomys_tridecemlineatus
ENSMICG00000012213	-	99	96.714	ENSJJAG00000000530	Pum1	99	97.887	Jaculus_jaculus
ENSMICG00000012213	-	99	72.388	ENSKMAG00000003481	pum1	94	89.423	Kryptolebias_marmoratus
ENSMICG00000012213	-	100	88.675	ENSLBEG00000002527	pum1	94	90.144	Labrus_bergylta
ENSMICG00000012213	-	100	88.078	ENSLACG00000017188	PUM1	100	85.738	Latimeria_chalumnae
ENSMICG00000012213	-	100	93.253	ENSLOCG00000005210	pum1	93	93.253	Lepisosteus_oculatus
ENSMICG00000012213	-	99	96.462	ENSLAFG00000003178	PUM1	99	96.462	Loxodonta_africana
ENSMICG00000012213	-	100	96.757	ENSMFAG00000010291	PUM1	99	97.887	Macaca_fascicularis
ENSMICG00000012213	-	100	97.022	ENSMMUG00000013520	PUM1	100	97.022	Macaca_mulatta
ENSMICG00000012213	-	100	97.022	ENSMNEG00000034639	PUM1	100	97.022	Macaca_nemestrina
ENSMICG00000012213	-	100	97.088	ENSMLEG00000038743	PUM1	100	97.022	Mandrillus_leucophaeus
ENSMICG00000012213	-	100	88.675	ENSMAMG00000011606	pum1	94	90.144	Mastacembelus_armatus
ENSMICG00000012213	-	100	88.193	ENSMZEG00005005834	pum1	94	87.740	Maylandia_zebra
ENSMICG00000012213	-	100	95.169	ENSMGAG00000000724	PUM1	100	94.472	Meleagris_gallopavo
ENSMICG00000012213	-	99	96.714	ENSMAUG00000022090	Pum1	99	97.183	Mesocricetus_auratus
ENSMICG00000012213	-	99	96.630	ENSMOCG00000015463	Pum1	99	96.630	Microtus_ochrogaster
ENSMICG00000012213	-	89	85.912	ENSMMOG00000019817	pum1	100	90.073	Mola_mola
ENSMICG00000012213	-	99	95.458	ENSMODG00000017067	PUM1	99	95.458	Monodelphis_domestica
ENSMICG00000012213	-	89	86.143	ENSMALG00000016399	pum1	100	90.557	Monopterus_albus
ENSMICG00000012213	-	100	95.631	MGP_CAROLIEiJ_G0026549	Pum1	99	96.624	Mus_caroli
ENSMICG00000012213	-	100	95.874	ENSMUSG00000028580	Pum1	99	97.183	Mus_musculus
ENSMICG00000012213	-	100	95.874	MGP_PahariEiJ_G0028881	Pum1	99	97.183	Mus_pahari
ENSMICG00000012213	-	100	95.874	MGP_SPRETEiJ_G0027529	Pum1	99	97.183	Mus_spretus
ENSMICG00000012213	-	99	96.883	ENSMPUG00000015454	PUM1	99	96.883	Mustela_putorius_furo
ENSMICG00000012213	-	100	96.117	ENSMLUG00000006490	PUM1	99	97.046	Myotis_lucifugus
ENSMICG00000012213	-	99	96.967	ENSNGAG00000002378	Pum1	99	96.967	Nannospalax_galili
ENSMICG00000012213	-	78	88.620	ENSNBRG00000010689	pum1	99	81.582	Neolamprologus_brichardi
ENSMICG00000012213	-	100	95.757	ENSNLEG00000001151	PUM1	99	97.183	Nomascus_leucogenys
ENSMICG00000012213	-	75	100.000	ENSMEUG00000000976	-	75	94.175	Notamacropus_eugenii
ENSMICG00000012213	-	83	98.131	ENSOPRG00000001776	PUM1	73	98.131	Ochotona_princeps
ENSMICG00000012213	-	99	96.630	ENSODEG00000003465	PUM1	99	96.630	Octodon_degus
ENSMICG00000012213	-	100	88.434	ENSONIG00000002290	pum1	94	89.904	Oreochromis_niloticus
ENSMICG00000012213	-	80	78.871	ENSOANG00000004902	-	100	77.459	Ornithorhynchus_anatinus
ENSMICG00000012213	-	99	96.878	ENSOCUG00000008641	PUM1	99	96.878	Oryctolagus_cuniculus
ENSMICG00000012213	-	99	73.306	ENSORLG00000011482	pum1	94	90.385	Oryzias_latipes
ENSMICG00000012213	-	100	90.602	ENSORLG00020019461	pum1	94	90.385	Oryzias_latipes_hni
ENSMICG00000012213	-	100	90.602	ENSORLG00015011375	pum1	94	90.385	Oryzias_latipes_hsok
ENSMICG00000012213	-	89	90.799	ENSOMEG00000009312	pum1	100	90.557	Oryzias_melastigma
ENSMICG00000012213	-	100	94.890	ENSOGAG00000011063	PUM1	99	94.617	Otolemur_garnettii
ENSMICG00000012213	-	100	96.751	ENSOARG00000001899	PUM1	100	96.751	Ovis_aries
ENSMICG00000012213	-	100	97.022	ENSPPAG00000044003	PUM1	100	97.022	Pan_paniscus
ENSMICG00000012213	-	100	96.922	ENSPPRG00000001370	PUM1	99	97.887	Panthera_pardus
ENSMICG00000012213	-	100	96.755	ENSPTIG00000010798	PUM1	99	97.887	Panthera_tigris_altaica
ENSMICG00000012213	-	100	97.022	ENSPTRG00000000453	PUM1	100	97.022	Pan_troglodytes
ENSMICG00000012213	-	100	96.757	ENSPANG00000016338	PUM1	99	97.887	Papio_anubis
ENSMICG00000012213	-	94	90.777	ENSPKIG00000010578	pum1	99	90.777	Paramormyrops_kingsleyae
ENSMICG00000012213	-	100	94.928	ENSPSIG00000014118	PUM1	99	95.798	Pelodiscus_sinensis
ENSMICG00000012213	-	78	89.346	ENSPMGG00000005836	pum1	90	90.821	Periophthalmus_magnuspinnatus
ENSMICG00000012213	-	99	96.799	ENSPEMG00000010009	Pum1	99	97.183	Peromyscus_maniculatus_bairdii
ENSMICG00000012213	-	100	94.694	ENSPCIG00000014151	PUM1	100	94.784	Phascolarctos_cinereus
ENSMICG00000012213	-	94	87.952	ENSPFOG00000007289	pum1	93	89.423	Poecilia_formosa
ENSMICG00000012213	-	100	87.952	ENSPLAG00000007256	pum1	94	89.423	Poecilia_latipinna
ENSMICG00000012213	-	89	87.952	ENSPMEG00000019543	pum1	92	89.423	Poecilia_mexicana
ENSMICG00000012213	-	99	72.720	ENSPREG00000005195	pum1	94	89.423	Poecilia_reticulata
ENSMICG00000012213	-	100	95.894	ENSPPYG00000001621	PUM1	99	95.458	Pongo_abelii
ENSMICG00000012213	-	83	96.909	ENSPCAG00000001979	PUM1	75	97.149	Procavia_capensis
ENSMICG00000012213	-	100	97.383	ENSPCOG00000004398	PUM1	99	98.592	Propithecus_coquereli
ENSMICG00000012213	-	100	94.199	ENSPVAG00000005207	PUM1	97	94.710	Pteropus_vampyrus
ENSMICG00000012213	-	100	88.193	ENSPNYG00000009518	pum1	94	87.740	Pundamilia_nyererei
ENSMICG00000012213	-	100	89.880	ENSPNAG00000026728	pum1	93	89.880	Pygocentrus_nattereri
ENSMICG00000012213	-	99	96.878	ENSRNOG00000011709	Pum1	99	96.878	Rattus_norvegicus
ENSMICG00000012213	-	100	96.757	ENSRBIG00000042521	PUM1	99	97.887	Rhinopithecus_bieti
ENSMICG00000012213	-	100	97.022	ENSRROG00000020156	PUM1	100	97.022	Rhinopithecus_roxellana
ENSMICG00000012213	-	100	97.022	ENSSBOG00000032037	PUM1	100	97.022	Saimiri_boliviensis_boliviensis
ENSMICG00000012213	-	100	94.444	ENSSHAG00000010918	PUM1	99	95.290	Sarcophilus_harrisii
ENSMICG00000012213	-	100	88.675	ENSSMAG00000010918	pum1	100	90.557	Scophthalmus_maximus
ENSMICG00000012213	-	100	88.675	ENSSDUG00000009021	pum1	94	90.144	Seriola_dumerili
ENSMICG00000012213	-	95	88.675	ENSSLDG00000009667	pum1	93	90.144	Seriola_lalandi_dorsalis
ENSMICG00000012213	-	94	98.230	ENSSARG00000003055	PUM1	92	96.653	Sorex_araneus
ENSMICG00000012213	-	100	95.169	ENSSPUG00000006267	PUM1	99	94.861	Sphenodon_punctatus
ENSMICG00000012213	-	100	88.675	ENSSPAG00000016636	pum1	100	90.557	Stegastes_partitus
ENSMICG00000012213	-	100	96.667	ENSSSCG00000003591	PUM1	99	98.319	Sus_scrofa
ENSMICG00000012213	-	100	88.675	ENSTRUG00000013121	pum1	94	90.144	Takifugu_rubripes
ENSMICG00000012213	-	100	88.462	ENSTNIG00000016983	pum1	93	89.928	Tetraodon_nigroviridis
ENSMICG00000012213	-	86	95.671	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSMICG00000012213	-	91	96.992	ENSTTRG00000007436	PUM1	90	96.992	Tursiops_truncatus
ENSMICG00000012213	-	97	96.947	ENSUAMG00000018262	-	99	96.947	Ursus_americanus
ENSMICG00000012213	-	100	96.396	ENSUMAG00000009211	PUM1	100	96.396	Ursus_maritimus
ENSMICG00000012213	-	92	97.966	ENSVPAG00000005902	PUM1	92	96.970	Vicugna_pacos
ENSMICG00000012213	-	100	96.486	ENSVVUG00000014631	PUM1	100	96.486	Vulpes_vulpes
ENSMICG00000012213	-	100	85.783	ENSXETG00000012904	pum1	100	84.603	Xenopus_tropicalis
ENSMICG00000012213	-	100	87.952	ENSXMAG00000002945	pum1	94	89.423	Xiphophorus_maculatus