EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012217 (Gene tree)
Gene ID: 105864385
Gene Symbol: DDX54
Alias: APR-5|DP97|MGC2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 46014 bases
Position: chr21:3902363-3948376
Accession: 105864385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000011144	DBP10CT	PF08147.12	3.6e-18	1	1
ENSMICP00000011144	ResIII	PF04851.15	9.8e-07	1	1
ENSMICP00000011144	DEAD	PF00270.29	1.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000012241	DDX54-201	2625	XM_012752251	ENSMICP00000011144	874 (aa)	XP_012607705	UPI000C2ECADC

Gene Model

Click here to download ENSMICG00000012217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012217	DDX54	50	32.743	ENSMICG00000047072	-	63	32.743

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012217	DDX54	100	89.116	ENSG00000123064	DDX54	100	96.635	Homo_sapiens
ENSMICG00000012217	DDX54	96	61.682	ENSAPOG00000008602	ddx54	100	61.556	Acanthochromis_polyacanthus
ENSMICG00000012217	DDX54	97	88.551	ENSAMEG00000008775	DDX54	97	87.266	Ailuropoda_melanoleuca
ENSMICG00000012217	DDX54	98	61.073	ENSACIG00000019104	ddx54	100	61.187	Amphilophus_citrinellus
ENSMICG00000012217	DDX54	96	60.585	ENSAOCG00000008449	ddx54	100	61.098	Amphiprion_ocellaris
ENSMICG00000012217	DDX54	96	60.585	ENSAPEG00000014287	ddx54	100	61.098	Amphiprion_percula
ENSMICG00000012217	DDX54	98	60.046	ENSATEG00000018529	ddx54	100	60.845	Anabas_testudineus
ENSMICG00000012217	DDX54	93	71.726	ENSAPLG00000013191	DDX54	100	70.667	Anas_platyrhynchos
ENSMICG00000012217	DDX54	93	69.221	ENSACAG00000004703	DDX54	96	68.666	Anolis_carolinensis
ENSMICG00000012217	DDX54	88	81.130	ENSANAG00000032241	-	95	79.818	Aotus_nancymaae
ENSMICG00000012217	DDX54	100	79.617	ENSANAG00000032761	-	100	77.928	Aotus_nancymaae
ENSMICG00000012217	DDX54	98	60.805	ENSACLG00000013176	ddx54	100	60.805	Astatotilapia_calliptera
ENSMICG00000012217	DDX54	96	59.674	ENSAMXG00000009189	ddx54	100	59.609	Astyanax_mexicanus
ENSMICG00000012217	DDX54	100	90.878	ENSBTAG00000011930	DDX54	95	90.878	Bos_taurus
ENSMICG00000012217	DDX54	87	44.231	WBGene00022378	Y94H6A.5	92	43.909	Caenorhabditis_elegans
ENSMICG00000012217	DDX54	93	87.882	ENSCJAG00000010039	DDX54	88	87.515	Callithrix_jacchus
ENSMICG00000012217	DDX54	65	84.441	ENSCAFG00000009029	DDX54	99	83.916	Canis_familiaris
ENSMICG00000012217	DDX54	100	87.841	ENSCAFG00020017643	DDX54	100	87.386	Canis_lupus_dingo
ENSMICG00000012217	DDX54	100	87.955	ENSCHIG00000026798	DDX54	100	86.818	Capra_hircus
ENSMICG00000012217	DDX54	93	85.333	ENSTSYG00000007898	DDX54	94	84.000	Carlito_syrichta
ENSMICG00000012217	DDX54	93	84.963	ENSCAPG00000001482	DDX54	99	80.952	Cavia_aperea
ENSMICG00000012217	DDX54	100	86.136	ENSCPOG00000020649	DDX54	100	86.023	Cavia_porcellus
ENSMICG00000012217	DDX54	100	88.977	ENSCCAG00000022625	DDX54	100	88.523	Cebus_capucinus
ENSMICG00000012217	DDX54	100	87.656	ENSCATG00000041943	DDX54	100	87.656	Cercocebus_atys
ENSMICG00000012217	DDX54	100	83.922	ENSCLAG00000010748	DDX54	100	83.808	Chinchilla_lanigera
ENSMICG00000012217	DDX54	96	84.174	ENSCSAG00000002432	DDX54	93	84.291	Chlorocebus_sabaeus
ENSMICG00000012217	DDX54	75	67.884	ENSCPBG00000017982	DDX54	85	66.818	Chrysemys_picta_bellii
ENSMICG00000012217	DDX54	86	52.078	ENSCING00000004789	-	93	51.495	Ciona_intestinalis
ENSMICG00000012217	DDX54	88	50.834	ENSCSAVG00000008916	-	98	66.867	Ciona_savignyi
ENSMICG00000012217	DDX54	88	97.034	ENSCANG00000020637	DDX54	100	97.034	Colobus_angolensis_palliatus
ENSMICG00000012217	DDX54	100	85.405	ENSCGRG00001014803	Ddx54	100	84.721	Cricetulus_griseus_chok1gshd
ENSMICG00000012217	DDX54	100	85.097	ENSCGRG00000002827	Ddx54	100	84.414	Cricetulus_griseus_crigri
ENSMICG00000012217	DDX54	96	59.602	ENSCSEG00000016462	ddx54	100	59.611	Cynoglossus_semilaevis
ENSMICG00000012217	DDX54	98	60.046	ENSCVAG00000022404	ddx54	100	59.840	Cyprinodon_variegatus
ENSMICG00000012217	DDX54	96	62.894	ENSDARG00000105286	ddx54	100	62.428	Danio_rerio
ENSMICG00000012217	DDX54	100	84.554	ENSDNOG00000032913	DDX54	100	84.554	Dasypus_novemcinctus
ENSMICG00000012217	DDX54	80	84.143	ENSDORG00000003399	Ddx54	95	82.429	Dipodomys_ordii
ENSMICG00000012217	DDX54	78	45.254	FBgn0052344	CG32344	88	44.459	Drosophila_melanogaster
ENSMICG00000012217	DDX54	50	95.890	ENSETEG00000008430	-	53	95.890	Echinops_telfairi
ENSMICG00000012217	DDX54	80	57.143	ENSEBUG00000008886	ddx54	99	56.719	Eptatretus_burgeri
ENSMICG00000012217	DDX54	100	78.345	ENSEASG00005009501	DDX54	100	79.000	Equus_asinus_asinus
ENSMICG00000012217	DDX54	100	86.493	ENSECAG00000012890	DDX54	100	86.947	Equus_caballus
ENSMICG00000012217	DDX54	67	96.875	ENSEEUG00000008296	-	66	96.875	Erinaceus_europaeus
ENSMICG00000012217	DDX54	96	60.702	ENSELUG00000013533	ddx54	100	60.650	Esox_lucius
ENSMICG00000012217	DDX54	100	85.991	ENSFCAG00000027806	DDX54	100	87.130	Felis_catus
ENSMICG00000012217	DDX54	91	71.731	ENSFALG00000007737	DDX54	100	71.161	Ficedula_albicollis
ENSMICG00000012217	DDX54	91	88.235	ENSFDAG00000019953	DDX54	100	88.272	Fukomys_damarensis
ENSMICG00000012217	DDX54	98	60.137	ENSFHEG00000018425	ddx54	100	59.932	Fundulus_heteroclitus
ENSMICG00000012217	DDX54	94	59.405	ENSGMOG00000011746	ddx54	100	59.167	Gadus_morhua
ENSMICG00000012217	DDX54	95	70.828	ENSGALG00000007490	DDX54	99	69.809	Gallus_gallus
ENSMICG00000012217	DDX54	98	59.332	ENSGAFG00000010336	ddx54	100	59.332	Gambusia_affinis
ENSMICG00000012217	DDX54	93	59.075	ENSGACG00000016793	ddx54	100	57.705	Gasterosteus_aculeatus
ENSMICG00000012217	DDX54	94	70.782	ENSGAGG00000022803	DDX54	100	70.859	Gopherus_agassizii
ENSMICG00000012217	DDX54	100	89.116	ENSGGOG00000010414	DDX54	100	89.229	Gorilla_gorilla
ENSMICG00000012217	DDX54	100	85.763	ENSHGLG00000014411	DDX54	100	85.763	Heterocephalus_glaber_female
ENSMICG00000012217	DDX54	100	85.861	ENSHGLG00100018511	DDX54	100	85.861	Heterocephalus_glaber_male
ENSMICG00000012217	DDX54	97	60.422	ENSHCOG00000019287	ddx54	100	60.208	Hippocampus_comes
ENSMICG00000012217	DDX54	96	60.349	ENSIPUG00000015556	Ddx54	100	60.114	Ictalurus_punctatus
ENSMICG00000012217	DDX54	87	86.194	ENSSTOG00000004068	DDX54	100	85.677	Ictidomys_tridecemlineatus
ENSMICG00000012217	DDX54	99	85.813	ENSJJAG00000015712	Ddx54	100	86.803	Jaculus_jaculus
ENSMICG00000012217	DDX54	98	60.046	ENSKMAG00000017520	ddx54	100	60.046	Kryptolebias_marmoratus
ENSMICG00000012217	DDX54	96	59.419	ENSLBEG00000019480	ddx54	100	58.418	Labrus_bergylta
ENSMICG00000012217	DDX54	94	65.316	ENSLACG00000008944	DDX54	97	64.041	Latimeria_chalumnae
ENSMICG00000012217	DDX54	96	63.423	ENSLOCG00000008485	ddx54	100	62.788	Lepisosteus_oculatus
ENSMICG00000012217	DDX54	88	75.467	ENSLAFG00000027782	DDX54	100	74.097	Loxodonta_africana
ENSMICG00000012217	DDX54	100	87.783	ENSMFAG00000043636	DDX54	100	87.670	Macaca_fascicularis
ENSMICG00000012217	DDX54	100	88.914	ENSMMUG00000021795	DDX54	100	89.027	Macaca_mulatta
ENSMICG00000012217	DDX54	100	82.127	ENSMNEG00000043605	DDX54	100	82.240	Macaca_nemestrina
ENSMICG00000012217	DDX54	99	84.694	ENSMLEG00000038981	DDX54	99	84.824	Mandrillus_leucophaeus
ENSMICG00000012217	DDX54	98	60.388	ENSMAMG00000012784	ddx54	100	60.274	Mastacembelus_armatus
ENSMICG00000012217	DDX54	98	60.784	ENSMZEG00005018773	ddx54	100	60.900	Maylandia_zebra
ENSMICG00000012217	DDX54	93	70.388	ENSMGAG00000009183	DDX54	100	69.891	Meleagris_gallopavo
ENSMICG00000012217	DDX54	100	84.439	ENSMAUG00000011051	Ddx54	100	84.897	Mesocricetus_auratus
ENSMICG00000012217	DDX54	100	86.187	ENSMOCG00000010835	Ddx54	100	85.177	Microtus_ochrogaster
ENSMICG00000012217	DDX54	96	58.989	ENSMMOG00000009634	ddx54	100	58.506	Mola_mola
ENSMICG00000012217	DDX54	95	75.449	ENSMODG00000003413	DDX54	99	75.779	Monodelphis_domestica
ENSMICG00000012217	DDX54	98	60.855	ENSMALG00000022098	ddx54	100	60.508	Monopterus_albus
ENSMICG00000012217	DDX54	100	83.694	MGP_CAROLIEiJ_G0027665	Ddx54	100	83.808	Mus_caroli
ENSMICG00000012217	DDX54	100	83.276	ENSMUSG00000029599	Ddx54	100	83.618	Mus_musculus
ENSMICG00000012217	DDX54	100	84.151	MGP_PahariEiJ_G0024247	Ddx54	100	84.265	Mus_pahari
ENSMICG00000012217	DDX54	100	83.618	MGP_SPRETEiJ_G0028665	Ddx54	100	83.732	Mus_spretus
ENSMICG00000012217	DDX54	100	87.827	ENSMPUG00000002574	DDX54	100	87.941	Mustela_putorius_furo
ENSMICG00000012217	DDX54	100	84.449	ENSNGAG00000021313	Ddx54	100	83.636	Nannospalax_galili
ENSMICG00000012217	DDX54	68	76.271	ENSNBRG00000005588	ddx54	75	76.513	Neolamprologus_brichardi
ENSMICG00000012217	DDX54	100	88.168	ENSNLEG00000000162	DDX54	100	88.168	Nomascus_leucogenys
ENSMICG00000012217	DDX54	79	76.623	ENSMEUG00000015392	DDX54	98	77.729	Notamacropus_eugenii
ENSMICG00000012217	DDX54	91	81.395	ENSOPRG00000012000	DDX54	92	77.586	Ochotona_princeps
ENSMICG00000012217	DDX54	100	82.554	ENSODEG00000014863	DDX54	100	82.554	Octodon_degus
ENSMICG00000012217	DDX54	100	84.807	ENSOCUG00000008932	DDX54	100	84.807	Oryctolagus_cuniculus
ENSMICG00000012217	DDX54	98	60.115	ENSORLG00000007385	ddx54	100	59.677	Oryzias_latipes
ENSMICG00000012217	DDX54	98	60.460	ENSORLG00020000858	ddx54	100	60.023	Oryzias_latipes_hni
ENSMICG00000012217	DDX54	98	59.908	ENSORLG00015006956	ddx54	100	59.562	Oryzias_latipes_hsok
ENSMICG00000012217	DDX54	96	60.987	ENSOMEG00000003663	ddx54	100	60.665	Oryzias_melastigma
ENSMICG00000012217	DDX54	100	89.041	ENSOGAG00000004210	DDX54	100	89.384	Otolemur_garnettii
ENSMICG00000012217	DDX54	100	88.851	ENSOARG00000008363	DDX54	100	87.941	Ovis_aries
ENSMICG00000012217	DDX54	100	88.814	ENSPPAG00000042178	DDX54	100	88.927	Pan_paniscus
ENSMICG00000012217	DDX54	100	83.827	ENSPPRG00000005223	DDX54	100	85.210	Panthera_pardus
ENSMICG00000012217	DDX54	75	73.430	ENSPTIG00000019728	DDX54	86	73.430	Panthera_tigris_altaica
ENSMICG00000012217	DDX54	100	89.116	ENSPTRG00000005483	DDX54	100	89.229	Pan_troglodytes
ENSMICG00000012217	DDX54	100	88.688	ENSPANG00000008883	DDX54	100	88.801	Papio_anubis
ENSMICG00000012217	DDX54	96	62.105	ENSPKIG00000018272	ddx54	98	61.883	Paramormyrops_kingsleyae
ENSMICG00000012217	DDX54	53	81.330	ENSPSIG00000005055	DDX54	96	81.330	Pelodiscus_sinensis
ENSMICG00000012217	DDX54	93	59.387	ENSPMGG00000010988	ddx54	99	59.146	Periophthalmus_magnuspinnatus
ENSMICG00000012217	DDX54	100	85.975	ENSPEMG00000016701	Ddx54	100	85.747	Peromyscus_maniculatus_bairdii
ENSMICG00000012217	DDX54	98	60.345	ENSPFOG00000019822	ddx54	100	60.460	Poecilia_formosa
ENSMICG00000012217	DDX54	98	59.794	ENSPLAG00000004530	ddx54	100	59.908	Poecilia_latipinna
ENSMICG00000012217	DDX54	98	59.679	ENSPMEG00000010803	ddx54	100	59.794	Poecilia_mexicana
ENSMICG00000012217	DDX54	98	60.000	ENSPREG00000014372	ddx54	100	60.115	Poecilia_reticulata
ENSMICG00000012217	DDX54	100	87.783	ENSPPYG00000004984	DDX54	100	87.896	Pongo_abelii
ENSMICG00000012217	DDX54	100	81.143	ENSPCAG00000008462	DDX54	100	80.114	Procavia_capensis
ENSMICG00000012217	DDX54	100	94.057	ENSPCOG00000006050	DDX54	100	93.943	Propithecus_coquereli
ENSMICG00000012217	DDX54	93	92.096	ENSPVAG00000017347	DDX54	100	76.397	Pteropus_vampyrus
ENSMICG00000012217	DDX54	96	58.460	ENSPNAG00000014459	ddx54	97	64.175	Pygocentrus_nattereri
ENSMICG00000012217	DDX54	100	84.738	ENSRNOG00000001377	Ddx54	96	83.845	Rattus_norvegicus
ENSMICG00000012217	DDX54	100	87.119	ENSRBIG00000032535	DDX54	100	87.119	Rhinopithecus_bieti
ENSMICG00000012217	DDX54	100	84.633	ENSRROG00000029557	DDX54	100	84.746	Rhinopithecus_roxellana
ENSMICG00000012217	DDX54	80	36.876	YDL031W	-	82	35.732	Saccharomyces_cerevisiae
ENSMICG00000012217	DDX54	100	88.750	ENSSBOG00000028194	DDX54	100	88.523	Saimiri_boliviensis_boliviensis
ENSMICG00000012217	DDX54	93	74.178	ENSSHAG00000015646	DDX54	71	80.742	Sarcophilus_harrisii
ENSMICG00000012217	DDX54	95	62.989	ENSSFOG00015014981	ddx54	100	61.156	Scleropages_formosus
ENSMICG00000012217	DDX54	96	57.506	ENSSMAG00000003210	ddx54	100	57.675	Scophthalmus_maximus
ENSMICG00000012217	DDX54	94	59.320	ENSSDUG00000004474	ddx54	100	58.937	Seriola_dumerili
ENSMICG00000012217	DDX54	96	58.295	ENSSLDG00000010380	ddx54	100	58.090	Seriola_lalandi_dorsalis
ENSMICG00000012217	DDX54	95	70.251	ENSSPUG00000014141	DDX54	98	67.824	Sphenodon_punctatus
ENSMICG00000012217	DDX54	92	60.098	ENSSPAG00000022918	ddx54	99	59.689	Stegastes_partitus
ENSMICG00000012217	DDX54	100	88.182	ENSSSCG00000009876	DDX54	100	87.045	Sus_scrofa
ENSMICG00000012217	DDX54	92	70.905	ENSTGUG00000009126	DDX54	100	70.762	Taeniopygia_guttata
ENSMICG00000012217	DDX54	95	59.251	ENSTRUG00000014939	ddx54	100	58.750	Takifugu_rubripes
ENSMICG00000012217	DDX54	99	58.824	ENSTNIG00000009037	ddx54	100	59.635	Tetraodon_nigroviridis
ENSMICG00000012217	DDX54	73	93.462	ENSTBEG00000003783	DDX54	79	93.462	Tupaia_belangeri
ENSMICG00000012217	DDX54	100	85.051	ENSTTRG00000016678	DDX54	100	84.938	Tursiops_truncatus
ENSMICG00000012217	DDX54	100	87.500	ENSUAMG00000028387	DDX54	100	86.863	Ursus_americanus
ENSMICG00000012217	DDX54	80	93.596	ENSUMAG00000010245	DDX54	96	92.821	Ursus_maritimus
ENSMICG00000012217	DDX54	100	88.068	ENSVVUG00000010212	DDX54	100	87.614	Vulpes_vulpes
ENSMICG00000012217	DDX54	98	63.140	ENSXETG00000016410	ddx54	100	63.023	Xenopus_tropicalis
ENSMICG00000012217	DDX54	98	59.562	ENSXCOG00000002909	ddx54	100	59.007	Xiphophorus_couchianus
ENSMICG00000012217	DDX54	98	60.184	ENSXMAG00000005312	ddx54	100	59.862	Xiphophorus_maculatus