EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMICG00000012226 (Gene tree)
Gene ID
105868869
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Minus strand
Length
13118 bases
Position
chr9:114784517-114797634
Accession
105868869
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000011126RRM_1PF00076.222.6e-4312
ENSMICP00000011126RRM_1PF00076.222.6e-4322
ENSMICP00000034981RRM_1PF00076.222.7e-4312
ENSMICP00000034981RRM_1PF00076.222.7e-4322
ENSMICP00000028089RRM_1PF00076.222.9e-4312
ENSMICP00000028089RRM_1PF00076.222.9e-4322
ENSMICP00000019588RRM_1PF00076.223.6e-4312
ENSMICP00000019588RRM_1PF00076.223.6e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000036432PUF60-2012605XM_012760143ENSMICP00000028089557 (aa)XP_012615597UPI0006428F2A
ENSMICT00000052693PUF60-2031813XM_012760147ENSMICP00000034981530 (aa)XP_012615601UPI00005A29C0
ENSMICT00000031878PUF60-2022534-ENSMICP00000019588561 (aa)-UPI000C2EC0A1
ENSMICT00000012223PUF60-2041581-ENSMICP00000011126526 (aa)-UPI000C2ED115
Gene Model
Click here to download ENSMICG00000012226's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012226's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMICG00000012226PUF606135.294ENSMICG00000027681U2AF26337.255
ENSMICG00000012226PUF605432.432ENSMICG00000010644CELF37932.979
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000012226PUF6010099.623ENSG00000179950PUF6010099.623Homo_sapiens
ENSMICG00000012226PUF609985.633ENSAPOG00000001713puf60b9985.633Acanthochromis_polyacanthus
ENSMICG00000012226PUF609997.893ENSAMEG00000006406PUF609997.307Ailuropoda_melanoleuca
ENSMICG00000012226PUF609885.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSMICG00000012226PUF609877.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSMICG00000012226PUF6010080.899ENSAOCG00000015558-10081.461Amphiprion_ocellaris
ENSMICG00000012226PUF609985.633ENSAOCG00000005395puf60b10086.372Amphiprion_ocellaris
ENSMICG00000012226PUF609872.745ENSAPEG00000001836-9974.194Amphiprion_percula
ENSMICG00000012226PUF609980.076ENSAPEG00000011923puf60b9980.114Amphiprion_percula
ENSMICG00000012226PUF609985.389ENSATEG00000001730puf60b9985.417Anabas_testudineus
ENSMICG00000012226PUF609981.061ENSATEG00000006303-9981.524Anabas_testudineus
ENSMICG00000012226PUF609998.467ENSAPLG00000010150PUF6010098.467Anas_platyrhynchos
ENSMICG00000012226PUF609996.565ENSACAG00000001645PUF609896.212Anolis_carolinensis
ENSMICG00000012226PUF6010099.623ENSANAG00000018626PUF6010099.623Aotus_nancymaae
ENSMICG00000012226PUF609885.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSMICG00000012226PUF609984.299ENSAMXG00000036570puf60a10081.455Astyanax_mexicanus
ENSMICG00000012226PUF609876.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSMICG00000012226PUF6010099.623ENSBTAG00000037493PUF6010099.623Bos_taurus
ENSMICG00000012226PUF608050.162WBGene00004389rnp-68452.041Caenorhabditis_elegans
ENSMICG00000012226PUF6010099.811ENSCJAG00000021485PUF6010099.811Callithrix_jacchus
ENSMICG00000012226PUF609999.617ENSCAFG00000001400PUF609998.032Canis_familiaris
ENSMICG00000012226PUF60100100.000ENSCAFG00020018754PUF60100100.000Canis_lupus_dingo
ENSMICG00000012226PUF609999.617ENSCHIG00000001618PUF609299.455Capra_hircus
ENSMICG00000012226PUF6010099.811ENSTSYG00000011912PUF60100100.000Carlito_syrichta
ENSMICG00000012226PUF609994.106ENSCPOG00000014613PUF609993.381Cavia_porcellus
ENSMICG00000012226PUF6010099.623ENSCCAG00000007744PUF6010099.623Cebus_capucinus
ENSMICG00000012226PUF6010099.623ENSCATG00000035405PUF6010099.623Cercocebus_atys
ENSMICG00000012226PUF609999.808ENSCLAG00000009154PUF6010098.582Chinchilla_lanigera
ENSMICG00000012226PUF609899.612ENSCSAG00000008878PUF6010099.612Chlorocebus_sabaeus
ENSMICG00000012226PUF609998.106ENSCPBG00000005595PUF609998.106Chrysemys_picta_bellii
ENSMICG00000012226PUF6010048.346ENSCING00000008436-10047.970Ciona_intestinalis
ENSMICG00000012226PUF606359.882ENSCING00000002156-8759.882Ciona_intestinalis
ENSMICG00000012226PUF609649.605ENSCSAVG00000004765-9749.485Ciona_savignyi
ENSMICG00000012226PUF609655.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSMICG00000012226PUF607999.520ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSMICG00000012226PUF609999.042ENSCGRG00001017442Puf6010097.872Cricetulus_griseus_chok1gshd
ENSMICG00000012226PUF609999.042ENSCGRG00000003717Puf609997.302Cricetulus_griseus_crigri
ENSMICG00000012226PUF609984.848ENSCSEG00000019887puf60b9384.659Cynoglossus_semilaevis
ENSMICG00000012226PUF609971.887ENSCSEG00000014845-9173.507Cynoglossus_semilaevis
ENSMICG00000012226PUF609884.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSMICG00000012226PUF609080.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSMICG00000012226PUF609878.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSMICG00000012226PUF609886.932ENSDARG00000032175puf60a9994.043Danio_rerio
ENSMICG00000012226PUF609982.278ENSDNOG00000043278PUF609882.278Dasypus_novemcinctus
ENSMICG00000012226PUF609999.617ENSDORG00000004585Puf6010099.274Dipodomys_ordii
ENSMICG00000012226PUF609648.969FBgn0028577hfp8658.754Drosophila_melanogaster
ENSMICG00000012226PUF609960.672ENSEBUG00000014291puf60b8563.851Eptatretus_burgeri
ENSMICG00000012226PUF609670.040ENSEBUG00000005470-8671.789Eptatretus_burgeri
ENSMICG00000012226PUF60100100.000ENSEASG00005009695PUF60100100.000Equus_asinus_asinus
ENSMICG00000012226PUF6099100.000ENSECAG00000024681PUF609999.277Equus_caballus
ENSMICG00000012226PUF6010084.572ENSELUG00000018443-10084.572Esox_lucius
ENSMICG00000012226PUF6010083.019ENSELUG00000006507puf60b10079.464Esox_lucius
ENSMICG00000012226PUF6010099.623ENSFCAG00000001045PUF6010099.623Felis_catus
ENSMICG00000012226PUF609985.878ENSFALG00000001136PUF609987.048Ficedula_albicollis
ENSMICG00000012226PUF609999.425ENSFDAG00000017177PUF6010098.227Fukomys_damarensis
ENSMICG00000012226PUF6010083.551ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSMICG00000012226PUF609479.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSMICG00000012226PUF609971.805ENSGMOG00000006392puf60b10071.053Gadus_morhua
ENSMICG00000012226PUF606598.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSMICG00000012226PUF6010082.804ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSMICG00000012226PUF609879.537ENSGAFG00000004334-9978.958Gambusia_affinis
ENSMICG00000012226PUF6010073.371ENSGACG00000004717puf60b10072.710Gasterosteus_aculeatus
ENSMICG00000012226PUF609970.385ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSMICG00000012226PUF609998.106ENSGAGG00000013289PUF609398.106Gopherus_agassizii
ENSMICG00000012226PUF6010099.623ENSGGOG00000004646PUF6010099.623Gorilla_gorilla
ENSMICG00000012226PUF609984.688ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSMICG00000012226PUF609981.698ENSHBUG00000009634-9981.784Haplochromis_burtoni
ENSMICG00000012226PUF609999.425ENSHGLG00000006111PUF6010098.227Heterocephalus_glaber_female
ENSMICG00000012226PUF609999.425ENSHGLG00100012362PUF6010098.227Heterocephalus_glaber_male
ENSMICG00000012226PUF609882.136ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSMICG00000012226PUF609666.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSMICG00000012226PUF609882.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSMICG00000012226PUF609878.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSMICG00000012226PUF6010099.642ENSSTOG00000025037PUF6010099.642Ictidomys_tridecemlineatus
ENSMICG00000012226PUF6010098.577ENSJJAG00000001076Puf6010098.577Jaculus_jaculus
ENSMICG00000012226PUF609878.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSMICG00000012226PUF609885.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSMICG00000012226PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSMICG00000012226PUF606990.909ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSMICG00000012226PUF6010089.869ENSLOCG00000010106puf60b10088.743Lepisosteus_oculatus
ENSMICG00000012226PUF609998.276ENSLAFG00000022929PUF6010096.403Loxodonta_africana
ENSMICG00000012226PUF6010099.623ENSMFAG00000043373PUF6010099.623Macaca_fascicularis
ENSMICG00000012226PUF6010099.623ENSMMUG00000013558PUF6010099.623Macaca_mulatta
ENSMICG00000012226PUF6010099.623ENSMNEG00000031099PUF6010099.623Macaca_nemestrina
ENSMICG00000012226PUF609899.612ENSMLEG00000040009PUF6010099.612Mandrillus_leucophaeus
ENSMICG00000012226PUF609982.453ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSMICG00000012226PUF609985.038ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSMICG00000012226PUF609981.887ENSMZEG00005019425-9981.973Maylandia_zebra
ENSMICG00000012226PUF609885.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSMICG00000012226PUF6010097.909ENSMGAG00000013070PUF609998.095Meleagris_gallopavo
ENSMICG00000012226PUF6010076.822ENSMAUG00000018549-9682.510Mesocricetus_auratus
ENSMICG00000012226PUF607297.549ENSMAUG00000014267-10097.549Mesocricetus_auratus
ENSMICG00000012226PUF609999.234ENSMOCG00000018780Puf6010098.050Microtus_ochrogaster
ENSMICG00000012226PUF609972.849ENSMMOG00000018059-9976.712Mola_mola
ENSMICG00000012226PUF609885.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSMICG00000012226PUF609999.234ENSMODG00000009161PUF6010097.846Monodelphis_domestica
ENSMICG00000012226PUF609980.377ENSMALG00000000200-9979.245Monopterus_albus
ENSMICG00000012226PUF609977.799ENSMALG00000006797puf60b9977.841Monopterus_albus
ENSMICG00000012226PUF609999.042MGP_CAROLIEiJ_G0019910Puf6010097.872Mus_caroli
ENSMICG00000012226PUF609999.042ENSMUSG00000002524Puf6010097.872Mus_musculus
ENSMICG00000012226PUF609999.042MGP_PahariEiJ_G0019920Puf6010097.872Mus_pahari
ENSMICG00000012226PUF609999.042MGP_SPRETEiJ_G0020812Puf6010097.872Mus_spretus
ENSMICG00000012226PUF609999.617ENSMPUG00000008137PUF609799.273Mustela_putorius_furo
ENSMICG00000012226PUF6010091.887ENSMLUG00000013032-10091.887Myotis_lucifugus
ENSMICG00000012226PUF609998.851ENSMLUG00000000238-9898.727Myotis_lucifugus
ENSMICG00000012226PUF609999.425ENSNGAG00000000712Puf6010099.419Nannospalax_galili
ENSMICG00000012226PUF609982.443ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSMICG00000012226PUF608381.596ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSMICG00000012226PUF6010099.284ENSNLEG00000002156PUF6010099.284Nomascus_leucogenys
ENSMICG00000012226PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSMICG00000012226PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSMICG00000012226PUF609674.162ENSODEG00000015513-9971.375Octodon_degus
ENSMICG00000012226PUF609982.163ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSMICG00000012226PUF609984.630ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSMICG00000012226PUF609778.210ENSOANG00000006962PUF609978.599Ornithorhynchus_anatinus
ENSMICG00000012226PUF609984.877ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSMICG00000012226PUF609878.788ENSORLG00000028655-9978.897Oryzias_latipes
ENSMICG00000012226PUF609978.612ENSORLG00020018144-9978.719Oryzias_latipes_hni
ENSMICG00000012226PUF609984.877ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSMICG00000012226PUF609978.424ENSORLG00015016833-9978.531Oryzias_latipes_hsok
ENSMICG00000012226PUF609983.992ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSMICG00000012226PUF609979.696ENSOMEG00000022185-9979.623Oryzias_melastigma
ENSMICG00000012226PUF609982.593ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSMICG00000012226PUF609999.808ENSOGAG00000006259PUF609998.387Otolemur_garnettii
ENSMICG00000012226PUF609997.126ENSOARG00000016235PUF609997.132Ovis_aries
ENSMICG00000012226PUF6010099.623ENSPPAG00000029933PUF6010099.623Pan_paniscus
ENSMICG00000012226PUF6010099.623ENSPPRG00000003257PUF6010099.623Panthera_pardus
ENSMICG00000012226PUF609997.318ENSPTIG00000009795PUF609997.318Panthera_tigris_altaica
ENSMICG00000012226PUF609999.425ENSPTRG00000043963-9999.093Pan_troglodytes
ENSMICG00000012226PUF6010099.434ENSPTRG00000020670PUF6010099.434Pan_troglodytes
ENSMICG00000012226PUF6010099.623ENSPANG00000021936PUF6010099.623Papio_anubis
ENSMICG00000012226PUF6010085.475ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSMICG00000012226PUF6010086.704ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSMICG00000012226PUF609998.276ENSPSIG00000004679PUF609998.279Pelodiscus_sinensis
ENSMICG00000012226PUF609884.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSMICG00000012226PUF609999.234ENSPEMG00000008820Puf6010098.050Peromyscus_maniculatus_bairdii
ENSMICG00000012226PUF6010098.859ENSPCIG00000020270PUF6010098.859Phascolarctos_cinereus
ENSMICG00000012226PUF609980.114ENSPFOG00000011118-9980.455Poecilia_formosa
ENSMICG00000012226PUF6010083.551ENSPFOG00000019217puf60b10082.109Poecilia_formosa
ENSMICG00000012226PUF609980.114ENSPLAG00000017025-9577.697Poecilia_latipinna
ENSMICG00000012226PUF609885.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSMICG00000012226PUF609980.114ENSPMEG00000009767-9578.062Poecilia_mexicana
ENSMICG00000012226PUF6010083.551ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSMICG00000012226PUF6010080.874ENSPREG00000005440puf60b10082.514Poecilia_reticulata
ENSMICG00000012226PUF607997.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSMICG00000012226PUF607999.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSMICG00000012226PUF6010099.811ENSPCOG00000027981PUF6010099.811Propithecus_coquereli
ENSMICG00000012226PUF6098100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSMICG00000012226PUF609885.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSMICG00000012226PUF609981.887ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSMICG00000012226PUF609982.576ENSPNAG00000019909puf60a10081.921Pygocentrus_nattereri
ENSMICG00000012226PUF609977.481ENSPNAG00000019415puf60b9672.093Pygocentrus_nattereri
ENSMICG00000012226PUF609999.042ENSRNOG00000009960Puf6010097.695Rattus_norvegicus
ENSMICG00000012226PUF6010099.623ENSRBIG00000035274PUF6010099.623Rhinopithecus_bieti
ENSMICG00000012226PUF6010099.623ENSRROG00000029360PUF6010099.623Rhinopithecus_roxellana
ENSMICG00000012226PUF609998.467ENSSBOG00000027089PUF609997.921Saimiri_boliviensis_boliviensis
ENSMICG00000012226PUF609197.624ENSSHAG00000006668PUF609697.624Sarcophilus_harrisii
ENSMICG00000012226PUF6010080.893ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSMICG00000012226PUF609486.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSMICG00000012226PUF607392.281ENSSMAG00000016381puf60b7492.281Scophthalmus_maximus
ENSMICG00000012226PUF609980.266ENSSDUG00000007048-9979.962Seriola_dumerili
ENSMICG00000012226PUF609983.643ENSSDUG00000009935puf60b10083.488Seriola_dumerili
ENSMICG00000012226PUF609985.551ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSMICG00000012226PUF609880.418ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSMICG00000012226PUF606685.260ENSSPUG00000013518PUF609485.260Sphenodon_punctatus
ENSMICG00000012226PUF609882.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSMICG00000012226PUF609982.873ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSMICG00000012226PUF609999.234ENSSSCG00000038800PUF6010096.038Sus_scrofa
ENSMICG00000012226PUF609995.211ENSTGUG00000012797-10095.211Taeniopygia_guttata
ENSMICG00000012226PUF609984.250ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSMICG00000012226PUF609877.713ENSTRUG00000008843-10077.713Takifugu_rubripes
ENSMICG00000012226PUF609984.250ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSMICG00000012226PUF609977.969ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSMICG00000012226PUF606196.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSMICG00000012226PUF607981.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSMICG00000012226PUF609899.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSMICG00000012226PUF60100100.000ENSUAMG00000024917PUF60100100.000Ursus_americanus
ENSMICG00000012226PUF609995.211ENSUMAG00000000272PUF609994.909Ursus_maritimus
ENSMICG00000012226PUF6099100.000ENSVVUG00000022527PUF60100100.000Vulpes_vulpes
ENSMICG00000012226PUF609994.808ENSXETG00000012469puf609994.275Xenopus_tropicalis
ENSMICG00000012226PUF609881.766ENSXCOG00000012355puf60b10082.917Xiphophorus_couchianus
ENSMICG00000012226PUF609977.567ENSXMAG00000010507-9977.143Xiphophorus_maculatus
ENSMICG00000012226PUF6010083.551ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus

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