EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012346 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 1574 bases
Position: chr20:56933112-56934685
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000031864	DEAD	PF00270.29	2.9e-17	1	2
ENSMICP00000031864	DEAD	PF00270.29	2.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000012343	-	1431	-	ENSMICP00000031864	476 (aa)	-	UPI000C2ECEFA

Gene Model

Click here to download ENSMICG00000012346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012346	-	50	32.016	ENSMICG00000010086	DDX47	75	31.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012346	-	99	71.429	ENSG00000182810	DDX28	96	71.346	Homo_sapiens
ENSMICG00000012346	-	94	37.765	ENSAPOG00000000991	ddx28	89	37.452	Acanthochromis_polyacanthus
ENSMICG00000012346	-	100	70.610	ENSAMEG00000019426	DDX28	97	71.264	Ailuropoda_melanoleuca
ENSMICG00000012346	-	92	39.258	ENSACIG00000021615	ddx28	90	39.453	Amphilophus_citrinellus
ENSMICG00000012346	-	94	38.031	ENSAOCG00000004610	ddx28	89	38.343	Amphiprion_ocellaris
ENSMICG00000012346	-	94	37.838	ENSAPEG00000002143	ddx28	89	38.150	Amphiprion_percula
ENSMICG00000012346	-	94	39.615	ENSATEG00000018691	ddx28	91	39.423	Anabas_testudineus
ENSMICG00000012346	-	94	43.860	ENSACAG00000009755	DDX28	94	44.639	Anolis_carolinensis
ENSMICG00000012346	-	92	38.600	ENSACLG00000012984	ddx28	89	38.600	Astatotilapia_calliptera
ENSMICG00000012346	-	93	39.252	ENSAMXG00000005878	ddx28	91	39.439	Astyanax_mexicanus
ENSMICG00000012346	-	99	71.296	ENSBTAG00000004290	DDX28	95	71.017	Bos_taurus
ENSMICG00000012346	-	97	69.943	ENSCAFG00000020327	DDX28	96	70.784	Canis_familiaris
ENSMICG00000012346	-	97	69.943	ENSCAFG00020019785	DDX28	96	70.784	Canis_lupus_dingo
ENSMICG00000012346	-	96	71.154	ENSCHIG00000009658	DDX28	95	71.154	Capra_hircus
ENSMICG00000012346	-	99	67.778	ENSCPOG00000013746	DDX28	97	68.522	Cavia_porcellus
ENSMICG00000012346	-	99	70.185	ENSCSAG00000018472	DDX28	95	70.633	Chlorocebus_sabaeus
ENSMICG00000012346	-	85	46.072	ENSCPBG00000012105	DDX28	85	45.221	Chrysemys_picta_bellii
ENSMICG00000012346	-	63	33.702	ENSCSAVG00000006341	-	94	33.702	Ciona_savignyi
ENSMICG00000012346	-	97	69.143	ENSCGRG00001024412	Ddx28	97	69.231	Cricetulus_griseus_chok1gshd
ENSMICG00000012346	-	93	39.020	ENSCSEG00000011651	ddx28	90	39.020	Cynoglossus_semilaevis
ENSMICG00000012346	-	96	39.326	ENSCVAG00000004044	ddx28	91	40.196	Cyprinodon_variegatus
ENSMICG00000012346	-	92	40.945	ENSDARG00000060411	ddx28	89	41.339	Danio_rerio
ENSMICG00000012346	-	63	67.302	ENSDNOG00000033593	DDX28	99	67.302	Dasypus_novemcinctus
ENSMICG00000012346	-	99	69.444	ENSDORG00000028868	Ddx28	96	69.674	Dipodomys_ordii
ENSMICG00000012346	-	99	68.519	ENSETEG00000001062	-	96	69.098	Echinops_telfairi
ENSMICG00000012346	-	59	43.077	ENSEBUG00000004791	ddx28	57	43.511	Eptatretus_burgeri
ENSMICG00000012346	-	95	72.973	ENSEASG00005020387	DDX28	96	73.129	Equus_asinus_asinus
ENSMICG00000012346	-	95	73.166	ENSECAG00000006451	DDX28	96	73.321	Equus_caballus
ENSMICG00000012346	-	73	63.250	ENSEEUG00000005017	DDX28	92	63.544	Erinaceus_europaeus
ENSMICG00000012346	-	92	40.430	ENSELUG00000005302	ddx28	95	40.864	Esox_lucius
ENSMICG00000012346	-	100	71.165	ENSFCAG00000012858	DDX28	96	71.839	Felis_catus
ENSMICG00000012346	-	93	39.571	ENSFHEG00000012573	ddx28	91	39.571	Fundulus_heteroclitus
ENSMICG00000012346	-	92	38.372	ENSGMOG00000017045	ddx28	96	38.372	Gadus_morhua
ENSMICG00000012346	-	93	40.267	ENSGALG00000048700	DDX28	89	40.840	Gallus_gallus
ENSMICG00000012346	-	92	38.235	ENSGAFG00000009249	ddx28	89	38.627	Gambusia_affinis
ENSMICG00000012346	-	99	38.787	ENSGACG00000016367	ddx28	94	39.922	Gasterosteus_aculeatus
ENSMICG00000012346	-	79	43.468	ENSGAGG00000004565	DDX28	96	43.468	Gopherus_agassizii
ENSMICG00000012346	-	99	71.429	ENSGGOG00000001220	DDX28	96	71.538	Gorilla_gorilla
ENSMICG00000012346	-	92	39.844	ENSHBUG00000001016	ddx28	90	38.943	Haplochromis_burtoni
ENSMICG00000012346	-	93	38.911	ENSHCOG00000017590	ddx28	92	38.911	Hippocampus_comes
ENSMICG00000012346	-	92	39.961	ENSIPUG00000017350	Ddx28	89	40.156	Ictalurus_punctatus
ENSMICG00000012346	-	99	68.889	ENSSTOG00000002064	DDX28	96	69.674	Ictidomys_tridecemlineatus
ENSMICG00000012346	-	99	66.974	ENSJJAG00000012460	-	96	67.495	Jaculus_jaculus
ENSMICG00000012346	-	94	38.077	ENSKMAG00000018183	ddx28	90	38.077	Kryptolebias_marmoratus
ENSMICG00000012346	-	93	38.641	ENSLBEG00000006072	ddx28	90	38.641	Labrus_bergylta
ENSMICG00000012346	-	92	43.307	ENSLACG00000005578	DDX28	87	43.307	Latimeria_chalumnae
ENSMICG00000012346	-	92	41.961	ENSLOCG00000017604	ddx28	90	42.941	Lepisosteus_oculatus
ENSMICG00000012346	-	95	71.456	ENSLAFG00000031239	DDX28	96	71.538	Loxodonta_africana
ENSMICG00000012346	-	99	70.000	ENSMMUG00000010836	DDX28	95	70.441	Macaca_mulatta
ENSMICG00000012346	-	93	39.766	ENSMAMG00000020220	ddx28	90	39.766	Mastacembelus_armatus
ENSMICG00000012346	-	92	39.335	ENSMZEG00005009292	ddx28	90	39.335	Maylandia_zebra
ENSMICG00000012346	-	99	69.444	ENSMOCG00000009815	Ddx28	96	69.349	Microtus_ochrogaster
ENSMICG00000012346	-	93	39.883	ENSMMOG00000000270	ddx28	91	39.883	Mola_mola
ENSMICG00000012346	-	95	58.414	ENSMODG00000005303	DDX28	94	58.382	Monodelphis_domestica
ENSMICG00000012346	-	93	39.847	ENSMALG00000008864	ddx28	90	39.306	Monopterus_albus
ENSMICG00000012346	-	99	67.593	MGP_CAROLIEiJ_G0031510	Ddx28	96	67.625	Mus_caroli
ENSMICG00000012346	-	96	68.199	ENSMUSG00000045538	Ddx28	96	68.199	Mus_musculus
ENSMICG00000012346	-	99	68.519	MGP_PahariEiJ_G0023110	Ddx28	96	68.582	Mus_pahari
ENSMICG00000012346	-	96	68.008	MGP_SPRETEiJ_G0032628	Ddx28	96	68.008	Mus_spretus
ENSMICG00000012346	-	71	68.957	ENSMPUG00000006915	DDX28	100	68.957	Mustela_putorius_furo
ENSMICG00000012346	-	100	68.946	ENSMLUG00000005899	DDX28	96	70.328	Myotis_lucifugus
ENSMICG00000012346	-	99	67.963	ENSNGAG00000015762	Ddx28	96	68.138	Nannospalax_galili
ENSMICG00000012346	-	92	40.275	ENSNBRG00000001337	ddx28	91	39.370	Neolamprologus_brichardi
ENSMICG00000012346	-	92	37.573	ENSONIG00000020597	ddx28	90	39.530	Oreochromis_niloticus
ENSMICG00000012346	-	55	57.439	ENSOANG00000003551	-	100	57.439	Ornithorhynchus_anatinus
ENSMICG00000012346	-	99	70.000	ENSOCUG00000023074	DDX28	96	70.385	Oryctolagus_cuniculus
ENSMICG00000012346	-	93	39.766	ENSORLG00000011968	ddx28	91	39.766	Oryzias_latipes
ENSMICG00000012346	-	93	39.766	ENSORLG00020001951	ddx28	92	39.766	Oryzias_latipes_hni
ENSMICG00000012346	-	93	39.571	ENSORLG00015023030	ddx28	92	39.571	Oryzias_latipes_hsok
ENSMICG00000012346	-	93	39.804	ENSOMEG00000012445	ddx28	90	39.804	Oryzias_melastigma
ENSMICG00000012346	-	97	72.401	ENSOGAG00000016895	DDX28	96	72.605	Otolemur_garnettii
ENSMICG00000012346	-	80	66.742	ENSOARG00000003313	DDX28	98	66.743	Ovis_aries
ENSMICG00000012346	-	99	68.275	ENSPPAG00000036971	DDX28	96	68.269	Pan_paniscus
ENSMICG00000012346	-	100	72.089	ENSPPRG00000018322	DDX28	96	72.605	Panthera_pardus
ENSMICG00000012346	-	100	69.316	ENSPTIG00000006444	DDX28	96	69.732	Panthera_tigris_altaica
ENSMICG00000012346	-	99	71.243	ENSPTRG00000008258	DDX28	96	71.346	Pan_troglodytes
ENSMICG00000012346	-	93	41.440	ENSPKIG00000021200	ddx28	93	41.440	Paramormyrops_kingsleyae
ENSMICG00000012346	-	54	52.297	ENSPSIG00000001127	DDX28	92	52.297	Pelodiscus_sinensis
ENSMICG00000012346	-	91	37.945	ENSPMGG00000007908	ddx28	88	37.945	Periophthalmus_magnuspinnatus
ENSMICG00000012346	-	99	67.712	ENSPEMG00000003395	Ddx28	96	68.893	Peromyscus_maniculatus_bairdii
ENSMICG00000012346	-	56	40.476	ENSPMAG00000006983	DDX28	96	40.476	Petromyzon_marinus
ENSMICG00000012346	-	92	39.612	ENSPFOG00000020838	DDX28	90	39.612	Poecilia_formosa
ENSMICG00000012346	-	92	39.612	ENSPFOG00000020952	ddx28	89	39.612	Poecilia_formosa
ENSMICG00000012346	-	92	39.612	ENSPLAG00000016292	ddx28	89	39.612	Poecilia_latipinna
ENSMICG00000012346	-	92	39.612	ENSPMEG00000011311	ddx28	88	39.612	Poecilia_mexicana
ENSMICG00000012346	-	92	39.412	ENSPREG00000002899	ddx28	88	39.412	Poecilia_reticulata
ENSMICG00000012346	-	99	70.686	ENSPPYG00000007481	DDX28	96	70.962	Pongo_abelii
ENSMICG00000012346	-	99	78.333	ENSPCOG00000024632	DDX28	96	79.271	Propithecus_coquereli
ENSMICG00000012346	-	92	36.739	ENSPNYG00000018804	ddx28	90	39.530	Pundamilia_nyererei
ENSMICG00000012346	-	92	41.973	ENSPNAG00000014597	ddx28	94	42.166	Pygocentrus_nattereri
ENSMICG00000012346	-	99	67.037	ENSRNOG00000019817	Ddx28	96	67.050	Rattus_norvegicus
ENSMICG00000012346	-	92	41.393	ENSSFOG00015010181	ddx28	92	41.199	Scleropages_formosus
ENSMICG00000012346	-	87	40.000	ENSSMAG00000006831	ddx28	93	39.489	Scophthalmus_maximus
ENSMICG00000012346	-	93	38.178	ENSSDUG00000003257	ddx28	89	38.372	Seriola_dumerili
ENSMICG00000012346	-	93	38.132	ENSSLDG00000004513	ddx28	89	38.132	Seriola_lalandi_dorsalis
ENSMICG00000012346	-	99	67.963	ENSSARG00000014169	DDX28	96	68.330	Sorex_araneus
ENSMICG00000012346	-	98	37.132	ENSSPAG00000000988	ddx28	91	38.196	Stegastes_partitus
ENSMICG00000012346	-	99	71.296	ENSSSCG00000026038	DDX28	96	71.209	Sus_scrofa
ENSMICG00000012346	-	93	38.189	ENSTRUG00000007815	ddx28	92	38.189	Takifugu_rubripes
ENSMICG00000012346	-	93	38.780	ENSTNIG00000011352	ddx28	100	38.780	Tetraodon_nigroviridis
ENSMICG00000012346	-	83	73.394	ENSTBEG00000017695	DDX28	76	73.822	Tupaia_belangeri
ENSMICG00000012346	-	100	72.828	ENSUAMG00000016116	DDX28	96	73.180	Ursus_americanus
ENSMICG00000012346	-	78	71.918	ENSUMAG00000019200	DDX28	89	72.082	Ursus_maritimus
ENSMICG00000012346	-	79	65.455	ENSVVUG00000012876	DDX28	83	66.508	Vulpes_vulpes
ENSMICG00000012346	-	93	41.223	ENSXETG00000005435	ddx28	99	41.223	Xenopus_tropicalis
ENSMICG00000012346	-	92	39.105	ENSXCOG00000012364	ddx28	90	40.000	Xiphophorus_couchianus
ENSMICG00000012346	-	92	39.328	ENSXMAG00000019603	ddx28	90	40.237	Xiphophorus_maculatus