EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012388 (Gene tree)
Gene ID: 105871421
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 39168 bases
Position: chr7:60238542-60277709
Accession: 105871421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000019472	La	PF05383.17	2.5e-17	1	1
ENSMICP00000011281	La	PF05383.17	2.6e-17	1	1
ENSMICP00000023256	La	PF05383.17	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000052599	-	1665	-	ENSMICP00000019472	555 (aa)	-	UPI000C2EA0FC
ENSMICT00000012391	-	1665	-	ENSMICP00000011281	555 (aa)	-	UPI000C2ECB8C
ENSMICT00000049785	-	1878	XM_020287734	ENSMICP00000023256	626 (aa)	XP_020143323	UPI000C2EB0CE

Gene Model

Click here to download ENSMICG00000012388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012388	-	96	73.548	ENSMICG00000001301	LARP4B	73	73.548
ENSMICG00000012388	-	99	93.193	ENSMICG00000030156	-	89	94.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012388	-	99	89.857	ENSG00000161813	LARP4	99	87.795	Homo_sapiens
ENSMICG00000012388	-	97	81.410	ENSAPOG00000021331	larp4ab	75	81.410	Acanthochromis_polyacanthus
ENSMICG00000012388	-	97	85.256	ENSAPOG00000007142	larp4aa	69	77.692	Acanthochromis_polyacanthus
ENSMICG00000012388	-	99	89.382	ENSAMEG00000001275	LARP4	88	89.382	Ailuropoda_melanoleuca
ENSMICG00000012388	-	94	77.395	ENSACIG00000001198	larp4aa	77	82.734	Amphilophus_citrinellus
ENSMICG00000012388	-	99	73.333	ENSAOCG00000006387	larp4ab	79	73.333	Amphiprion_ocellaris
ENSMICG00000012388	-	97	84.615	ENSAOCG00000002408	larp4aa	69	77.308	Amphiprion_ocellaris
ENSMICG00000012388	-	97	85.256	ENSAPEG00000019058	larp4aa	69	77.692	Amphiprion_percula
ENSMICG00000012388	-	97	79.487	ENSATEG00000001018	larp4ab	75	79.487	Anabas_testudineus
ENSMICG00000012388	-	97	85.256	ENSATEG00000020715	larp4aa	69	77.308	Anabas_testudineus
ENSMICG00000012388	-	97	90.566	ENSAPLG00000013661	LARP4	75	90.566	Anas_platyrhynchos
ENSMICG00000012388	-	97	91.026	ENSACAG00000017133	LARP4	75	82.857	Anolis_carolinensis
ENSMICG00000012388	-	99	89.699	ENSANAG00000029342	LARP4	87	89.699	Aotus_nancymaae
ENSMICG00000012388	-	95	75.849	ENSACLG00000002575	larp4aa	69	76.538	Astatotilapia_calliptera
ENSMICG00000012388	-	97	84.615	ENSAMXG00000001515	larp4ab	73	84.615	Astyanax_mexicanus
ENSMICG00000012388	-	97	87.179	ENSAMXG00000036493	larp4aa	72	87.179	Astyanax_mexicanus
ENSMICG00000012388	-	99	87.363	ENSBTAG00000017164	LARP4	87	87.363	Bos_taurus
ENSMICG00000012388	-	99	89.382	ENSCJAG00000021131	LARP4	87	89.382	Callithrix_jacchus
ENSMICG00000012388	-	99	90.016	ENSCAFG00000008174	LARP4	87	90.016	Canis_familiaris
ENSMICG00000012388	-	99	90.016	ENSCAFG00020014554	LARP4	88	90.016	Canis_lupus_dingo
ENSMICG00000012388	-	99	86.739	ENSCHIG00000025965	LARP4	88	86.739	Capra_hircus
ENSMICG00000012388	-	99	89.857	ENSTSYG00000004342	LARP4	87	89.857	Carlito_syrichta
ENSMICG00000012388	-	99	64.659	ENSCAPG00000012942	LARP4	86	64.025	Cavia_aperea
ENSMICG00000012388	-	99	80.190	ENSCPOG00000020519	LARP4	87	80.190	Cavia_porcellus
ENSMICG00000012388	-	99	88.906	ENSCCAG00000024439	LARP4	87	88.906	Cebus_capucinus
ENSMICG00000012388	-	98	89.295	ENSCATG00000044528	LARP4	88	88.254	Cercocebus_atys
ENSMICG00000012388	-	99	86.846	ENSCLAG00000001829	LARP4	87	86.846	Chinchilla_lanigera
ENSMICG00000012388	-	99	86.047	ENSCPBG00000019407	LARP4	69	86.047	Chrysemys_picta_bellii
ENSMICG00000012388	-	99	80.421	ENSCANG00000033097	-	93	79.450	Colobus_angolensis_palliatus
ENSMICG00000012388	-	99	90.491	ENSCANG00000029159	-	87	90.491	Colobus_angolensis_palliatus
ENSMICG00000012388	-	99	85.420	ENSCGRG00001010818	Larp4	88	85.420	Cricetulus_griseus_chok1gshd
ENSMICG00000012388	-	99	85.420	ENSCGRG00000009382	Larp4	88	85.420	Cricetulus_griseus_crigri
ENSMICG00000012388	-	97	85.256	ENSCSEG00000001963	larp4aa	69	76.923	Cynoglossus_semilaevis
ENSMICG00000012388	-	59	76.471	ENSCSEG00000003240	larp4ab	75	71.154	Cynoglossus_semilaevis
ENSMICG00000012388	-	95	77.011	ENSCVAG00000005488	larp4aa	69	76.923	Cyprinodon_variegatus
ENSMICG00000012388	-	97	84.713	ENSDARG00000074979	larp4ab	79	82.734	Danio_rerio
ENSMICG00000012388	-	97	83.851	ENSDARG00000078401	larp4aa	74	83.851	Danio_rerio
ENSMICG00000012388	-	98	89.385	ENSDNOG00000038525	LARP4	87	87.956	Dasypus_novemcinctus
ENSMICG00000012388	-	99	85.714	ENSDORG00000004013	Larp4	87	85.714	Dipodomys_ordii
ENSMICG00000012388	-	71	96.296	ENSETEG00000011683	LARP4	55	96.296	Echinops_telfairi
ENSMICG00000012388	-	61	58.794	ENSEBUG00000010394	LARP4	82	58.794	Eptatretus_burgeri
ENSMICG00000012388	-	64	47.945	ENSEBUG00000004426	LARP4	73	47.032	Eptatretus_burgeri
ENSMICG00000012388	-	99	88.431	ENSEASG00005004356	LARP4	88	90.576	Equus_asinus_asinus
ENSMICG00000012388	-	99	91.284	ENSECAG00000012479	LARP4	95	91.284	Equus_caballus
ENSMICG00000012388	-	90	99.145	ENSEEUG00000000316	LARP4	69	99.145	Erinaceus_europaeus
ENSMICG00000012388	-	95	72.659	ENSELUG00000000395	larp4aa	78	72.951	Esox_lucius
ENSMICG00000012388	-	97	74.144	ENSELUG00000018650	larp4ab	86	74.894	Esox_lucius
ENSMICG00000012388	-	99	90.808	ENSFCAG00000031897	LARP4	87	90.808	Felis_catus
ENSMICG00000012388	-	80	89.937	ENSFALG00000002114	LARP4	71	89.937	Ficedula_albicollis
ENSMICG00000012388	-	99	87.322	ENSFDAG00000006406	-	87	87.322	Fukomys_damarensis
ENSMICG00000012388	-	100	70.430	ENSFHEG00000013854	larp4ab	80	70.430	Fundulus_heteroclitus
ENSMICG00000012388	-	97	83.333	ENSFHEG00000004338	larp4aa	70	77.308	Fundulus_heteroclitus
ENSMICG00000012388	-	97	83.439	ENSGMOG00000008246	larp4aa	73	83.439	Gadus_morhua
ENSMICG00000012388	-	91	90.385	ENSGALG00000042122	LARP4	69	90.385	Gallus_gallus
ENSMICG00000012388	-	99	67.476	ENSGAFG00000021777	larp4ab	82	67.476	Gambusia_affinis
ENSMICG00000012388	-	95	78.544	ENSGACG00000008381	larp4aa	79	76.111	Gasterosteus_aculeatus
ENSMICG00000012388	-	98	75.000	ENSGACG00000000680	larp4ab	78	75.000	Gasterosteus_aculeatus
ENSMICG00000012388	-	99	86.550	ENSGAGG00000006969	LARP4	77	86.550	Gopherus_agassizii
ENSMICG00000012388	-	98	88.827	ENSGGOG00000015230	LARP4	94	90.598	Gorilla_gorilla
ENSMICG00000012388	-	95	75.849	ENSHBUG00000023074	larp4aa	69	76.538	Haplochromis_burtoni
ENSMICG00000012388	-	88	88.827	ENSHGLG00000005513	-	86	85.515	Heterocephalus_glaber_female
ENSMICG00000012388	-	54	78.841	ENSHGLG00000010979	-	79	81.381	Heterocephalus_glaber_female
ENSMICG00000012388	-	96	84.831	ENSHGLG00000013875	-	100	78.514	Heterocephalus_glaber_female
ENSMICG00000012388	-	54	78.841	ENSHGLG00100002832	-	79	81.381	Heterocephalus_glaber_male
ENSMICG00000012388	-	98	88.827	ENSHGLG00100016984	-	87	86.142	Heterocephalus_glaber_male
ENSMICG00000012388	-	98	84.916	ENSHGLG00100011678	-	87	79.398	Heterocephalus_glaber_male
ENSMICG00000012388	-	99	68.539	ENSHCOG00000020857	larp4ab	79	68.539	Hippocampus_comes
ENSMICG00000012388	-	97	82.692	ENSHCOG00000015951	larp4aa	73	82.692	Hippocampus_comes
ENSMICG00000012388	-	97	80.128	ENSIPUG00000021659	larp4ab	74	80.128	Ictalurus_punctatus
ENSMICG00000012388	-	97	80.864	ENSIPUG00000007514	larp4aa	74	80.864	Ictalurus_punctatus
ENSMICG00000012388	-	99	90.016	ENSSTOG00000003553	LARP4	87	90.016	Ictidomys_tridecemlineatus
ENSMICG00000012388	-	99	68.070	ENSKMAG00000018556	larp4ab	78	73.889	Kryptolebias_marmoratus
ENSMICG00000012388	-	97	84.615	ENSKMAG00000006800	larp4aa	69	76.923	Kryptolebias_marmoratus
ENSMICG00000012388	-	97	79.487	ENSLBEG00000019306	larp4ab	75	79.487	Labrus_bergylta
ENSMICG00000012388	-	95	77.395	ENSLBEG00000014537	larp4aa	67	77.308	Labrus_bergylta
ENSMICG00000012388	-	96	87.742	ENSLACG00000019090	LARP4	74	87.742	Latimeria_chalumnae
ENSMICG00000012388	-	97	85.093	ENSLOCG00000007113	larp4ab	72	85.093	Lepisosteus_oculatus
ENSMICG00000012388	-	94	95.804	ENSLAFG00000005160	LARP4	87	95.804	Loxodonta_africana
ENSMICG00000012388	-	99	90.491	ENSMFAG00000043681	LARP4	96	87.956	Macaca_fascicularis
ENSMICG00000012388	-	99	90.491	ENSMMUG00000008172	LARP4	87	90.491	Macaca_mulatta
ENSMICG00000012388	-	99	90.491	ENSMNEG00000034602	LARP4	96	87.956	Macaca_nemestrina
ENSMICG00000012388	-	98	68.739	ENSMNEG00000037799	-	87	76.296	Macaca_nemestrina
ENSMICG00000012388	-	99	90.650	ENSMLEG00000039661	LARP4	87	90.650	Mandrillus_leucophaeus
ENSMICG00000012388	-	98	80.357	ENSMAMG00000011206	larp4aa	75	80.357	Mastacembelus_armatus
ENSMICG00000012388	-	97	78.981	ENSMAMG00000002616	larp4ab	75	78.981	Mastacembelus_armatus
ENSMICG00000012388	-	95	75.849	ENSMZEG00005001813	larp4aa	69	76.538	Maylandia_zebra
ENSMICG00000012388	-	91	90.385	ENSMGAG00000010598	LARP4	69	90.385	Meleagris_gallopavo
ENSMICG00000012388	-	98	89.385	ENSMOCG00000020635	Larp4	95	84.469	Microtus_ochrogaster
ENSMICG00000012388	-	97	75.641	ENSMMOG00000004785	larp4aa	73	75.641	Mola_mola
ENSMICG00000012388	-	97	45.280	ENSMMOG00000021861	larp4ab	70	80.769	Mola_mola
ENSMICG00000012388	-	94	74.482	MGP_CAROLIEiJ_G0020281	Larp4	84	74.322	Mus_caroli
ENSMICG00000012388	-	99	85.737	ENSMUSG00000023025	Larp4	95	85.737	Mus_musculus
ENSMICG00000012388	-	99	86.212	MGP_PahariEiJ_G0020284	Larp4	88	86.212	Mus_pahari
ENSMICG00000012388	-	99	89.857	ENSMPUG00000008706	LARP4	85	89.857	Mustela_putorius_furo
ENSMICG00000012388	-	99	86.572	ENSMLUG00000012513	-	87	86.572	Myotis_lucifugus
ENSMICG00000012388	-	96	90.141	ENSNGAG00000001577	-	95	83.994	Nannospalax_galili
ENSMICG00000012388	-	97	84.615	ENSNBRG00000011292	larp4aa	69	76.538	Neolamprologus_brichardi
ENSMICG00000012388	-	99	90.808	ENSNLEG00000017798	LARP4	87	90.808	Nomascus_leucogenys
ENSMICG00000012388	-	70	76.667	ENSOPRG00000004592	-	65	76.667	Ochotona_princeps
ENSMICG00000012388	-	95	90.845	ENSODEG00000009770	LARP4	88	82.884	Octodon_degus
ENSMICG00000012388	-	97	77.564	ENSONIG00000019124	larp4ab	75	77.564	Oreochromis_niloticus
ENSMICG00000012388	-	97	84.615	ENSONIG00000011895	larp4aa	76	84.615	Oreochromis_niloticus
ENSMICG00000012388	-	65	83.240	ENSOANG00000004373	LARP4	81	72.247	Ornithorhynchus_anatinus
ENSMICG00000012388	-	99	87.480	ENSOCUG00000021417	-	87	87.480	Oryctolagus_cuniculus
ENSMICG00000012388	-	99	88.310	ENSOCUG00000026872	-	87	86.414	Oryctolagus_cuniculus
ENSMICG00000012388	-	97	83.974	ENSORLG00000006758	larp4aa	70	77.308	Oryzias_latipes
ENSMICG00000012388	-	97	83.974	ENSORLG00020010258	larp4aa	70	77.308	Oryzias_latipes_hni
ENSMICG00000012388	-	97	83.974	ENSORLG00015002292	larp4aa	70	77.308	Oryzias_latipes_hsok
ENSMICG00000012388	-	99	78.286	ENSOMEG00000019749	larp4aa	73	82.014	Oryzias_melastigma
ENSMICG00000012388	-	66	89.882	ENSOGAG00000001415	LARP4	82	89.882	Otolemur_garnettii
ENSMICG00000012388	-	99	87.051	ENSOARG00000017702	LARP4	87	87.051	Ovis_aries
ENSMICG00000012388	-	56	67.769	ENSPPAG00000039122	-	75	66.201	Pan_paniscus
ENSMICG00000012388	-	87	90.883	ENSPPAG00000035100	LARP4	82	91.197	Pan_paniscus
ENSMICG00000012388	-	99	90.650	ENSPPRG00000004522	LARP4	87	90.650	Panthera_pardus
ENSMICG00000012388	-	99	90.650	ENSPTIG00000015617	LARP4	87	90.650	Panthera_tigris_altaica
ENSMICG00000012388	-	56	67.218	ENSPTRG00000045907	-	72	73.477	Pan_troglodytes
ENSMICG00000012388	-	99	90.333	ENSPTRG00000004935	LARP4	87	90.333	Pan_troglodytes
ENSMICG00000012388	-	99	90.650	ENSPANG00000022964	LARP4	96	90.650	Papio_anubis
ENSMICG00000012388	-	97	83.125	ENSPKIG00000005950	larp4ab	77	83.125	Paramormyrops_kingsleyae
ENSMICG00000012388	-	97	90.566	ENSPSIG00000015867	LARP4	75	90.566	Pelodiscus_sinensis
ENSMICG00000012388	-	93	91.698	ENSPEMG00000018433	Larp4	94	87.418	Peromyscus_maniculatus_bairdii
ENSMICG00000012388	-	76	55.351	ENSPMAG00000002788	LARP4	99	41.026	Petromyzon_marinus
ENSMICG00000012388	-	98	85.475	ENSPCIG00000000384	LARP4	78	85.475	Phascolarctos_cinereus
ENSMICG00000012388	-	97	84.615	ENSPFOG00000013148	larp4aa	84	84.615	Poecilia_formosa
ENSMICG00000012388	-	99	73.333	ENSPFOG00000009764	larp4ab	79	73.333	Poecilia_formosa
ENSMICG00000012388	-	97	84.615	ENSPLAG00000013626	larp4aa	74	84.615	Poecilia_latipinna
ENSMICG00000012388	-	99	73.333	ENSPLAG00000008502	larp4ab	79	73.333	Poecilia_latipinna
ENSMICG00000012388	-	99	72.778	ENSPMEG00000002720	larp4ab	79	72.778	Poecilia_mexicana
ENSMICG00000012388	-	97	84.615	ENSPMEG00000014271	larp4aa	74	84.615	Poecilia_mexicana
ENSMICG00000012388	-	97	84.615	ENSPREG00000022597	larp4aa	74	84.615	Poecilia_reticulata
ENSMICG00000012388	-	66	90.376	ENSPPYG00000004512	-	83	90.376	Pongo_abelii
ENSMICG00000012388	-	95	89.157	ENSPCAG00000003671	LARP4	93	79.556	Procavia_capensis
ENSMICG00000012388	-	98	94.107	ENSPCOG00000026291	LARP4	84	96.154	Propithecus_coquereli
ENSMICG00000012388	-	92	87.500	ENSPVAG00000016840	LARP4	86	78.571	Pteropus_vampyrus
ENSMICG00000012388	-	95	75.849	ENSPNYG00000022265	larp4aa	69	76.538	Pundamilia_nyererei
ENSMICG00000012388	-	93	86.538	ENSPNAG00000024770	larp4aa	72	86.538	Pygocentrus_nattereri
ENSMICG00000012388	-	97	50.389	ENSPNAG00000014478	larp4ab	87	50.000	Pygocentrus_nattereri
ENSMICG00000012388	-	93	85.880	ENSRBIG00000036890	-	85	96.183	Rhinopithecus_bieti
ENSMICG00000012388	-	98	89.944	ENSRBIG00000038857	-	81	91.901	Rhinopithecus_bieti
ENSMICG00000012388	-	93	96.324	ENSRROG00000025487	-	96	88.435	Rhinopithecus_roxellana
ENSMICG00000012388	-	99	90.650	ENSRROG00000042764	-	87	90.650	Rhinopithecus_roxellana
ENSMICG00000012388	-	97	96.178	ENSSBOG00000026650	LARP4	96	88.590	Saimiri_boliviensis_boliviensis
ENSMICG00000012388	-	54	84.706	ENSSHAG00000013246	-	98	84.821	Sarcophilus_harrisii
ENSMICG00000012388	-	97	87.179	ENSSFOG00015003868	larp4aa	74	87.179	Scleropages_formosus
ENSMICG00000012388	-	97	85.256	ENSSFOG00015014096	larp4ab	81	64.516	Scleropages_formosus
ENSMICG00000012388	-	97	85.256	ENSSMAG00000019473	larp4aa	69	77.308	Scophthalmus_maximus
ENSMICG00000012388	-	99	73.889	ENSSMAG00000002838	larp4ab	79	73.889	Scophthalmus_maximus
ENSMICG00000012388	-	99	75.556	ENSSDUG00000006655	larp4ab	79	75.556	Seriola_dumerili
ENSMICG00000012388	-	93	77.011	ENSSDUG00000010621	larp4aa	69	76.923	Seriola_dumerili
ENSMICG00000012388	-	93	76.628	ENSSLDG00000004942	larp4aa	69	76.538	Seriola_lalandi_dorsalis
ENSMICG00000012388	-	99	76.111	ENSSLDG00000001791	larp4ab	79	76.111	Seriola_lalandi_dorsalis
ENSMICG00000012388	-	96	89.789	ENSSARG00000012469	LARP4	87	80.190	Sorex_araneus
ENSMICG00000012388	-	93	82.386	ENSSPUG00000016552	LARP4	74	78.947	Sphenodon_punctatus
ENSMICG00000012388	-	99	72.778	ENSSPAG00000002172	larp4ab	79	72.778	Stegastes_partitus
ENSMICG00000012388	-	97	85.897	ENSSPAG00000007222	larp4aa	74	82.517	Stegastes_partitus
ENSMICG00000012388	-	99	88.924	ENSSSCG00000028516	LARP4	95	88.924	Sus_scrofa
ENSMICG00000012388	-	97	89.937	ENSTGUG00000003479	LARP4	75	89.937	Taeniopygia_guttata
ENSMICG00000012388	-	97	82.051	ENSTRUG00000007206	larp4ab	75	82.051	Takifugu_rubripes
ENSMICG00000012388	-	97	82.692	ENSTNIG00000015109	larp4aa	71	75.385	Tetraodon_nigroviridis
ENSMICG00000012388	-	97	79.503	ENSTNIG00000014571	larp4ab	75	79.503	Tetraodon_nigroviridis
ENSMICG00000012388	-	96	88.761	ENSTBEG00000005167	LARP4	84	81.938	Tupaia_belangeri
ENSMICG00000012388	-	99	88.114	ENSTTRG00000003764	LARP4	86	88.114	Tursiops_truncatus
ENSMICG00000012388	-	67	89.767	ENSUAMG00000013764	LARP4	86	87.385	Ursus_americanus
ENSMICG00000012388	-	99	89.540	ENSUMAG00000008473	LARP4	87	89.540	Ursus_maritimus
ENSMICG00000012388	-	99	88.208	ENSVPAG00000010136	LARP4	87	88.208	Vicugna_pacos
ENSMICG00000012388	-	99	89.699	ENSVVUG00000024717	LARP4	92	91.168	Vulpes_vulpes
ENSMICG00000012388	-	97	81.143	ENSXETG00000007283	larp4	82	81.143	Xenopus_tropicalis
ENSMICG00000012388	-	100	69.945	ENSXCOG00000006387	larp4aa	80	70.330	Xiphophorus_couchianus
ENSMICG00000012388	-	97	84.615	ENSXMAG00000010519	larp4aa	74	84.615	Xiphophorus_maculatus
ENSMICG00000012388	-	99	45.359	ENSXMAG00000002156	larp4ab	83	67.961	Xiphophorus_maculatus