EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000012497 (Gene tree)
Gene ID: 105865243
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 20341 bases
Position: chr14:26982480-27002820
Accession: 105865243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000011378	zf-U11-48K	PF05253.12	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000012495	SNRNP48-201	1397	XM_012753697	ENSMICP00000011378	339 (aa)	XP_012609151	UPI00064323D0

Gene Model

Click here to download ENSMICG00000012497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012497	SNRNP48	100	92.330	ENSG00000168566	SNRNP48	100	92.330	Homo_sapiens
ENSMICG00000012497	SNRNP48	81	46.831	ENSAPOG00000021430	snrnp48	83	46.552	Acanthochromis_polyacanthus
ENSMICG00000012497	SNRNP48	99	87.320	ENSAMEG00000017349	SNRNP48	100	86.167	Ailuropoda_melanoleuca
ENSMICG00000012497	SNRNP48	83	46.127	ENSACIG00000002032	snrnp48	95	41.691	Amphilophus_citrinellus
ENSMICG00000012497	SNRNP48	81	47.535	ENSAOCG00000010562	snrnp48	96	42.816	Amphiprion_ocellaris
ENSMICG00000012497	SNRNP48	81	47.163	ENSAPEG00000003231	snrnp48	96	42.486	Amphiprion_percula
ENSMICG00000012497	SNRNP48	91	44.720	ENSATEG00000020210	snrnp48	80	49.821	Anabas_testudineus
ENSMICG00000012497	SNRNP48	83	65.068	ENSACAG00000002811	SNRNP48	89	64.828	Anolis_carolinensis
ENSMICG00000012497	SNRNP48	100	92.035	ENSANAG00000033538	SNRNP48	100	92.035	Aotus_nancymaae
ENSMICG00000012497	SNRNP48	94	45.846	ENSAMXG00000015309	snrnp48	84	47.735	Astyanax_mexicanus
ENSMICG00000012497	SNRNP48	100	85.000	ENSBTAG00000001123	SNRNP48	100	84.706	Bos_taurus
ENSMICG00000012497	SNRNP48	100	91.445	ENSCJAG00000021330	SNRNP48	100	91.445	Callithrix_jacchus
ENSMICG00000012497	SNRNP48	99	89.881	ENSCAFG00000009574	SNRNP48	83	89.911	Canis_familiaris
ENSMICG00000012497	SNRNP48	99	89.911	ENSCAFG00020013203	SNRNP48	99	89.911	Canis_lupus_dingo
ENSMICG00000012497	SNRNP48	100	86.471	ENSCHIG00000015216	SNRNP48	100	86.176	Capra_hircus
ENSMICG00000012497	SNRNP48	100	90.560	ENSTSYG00000000698	SNRNP48	100	90.560	Carlito_syrichta
ENSMICG00000012497	SNRNP48	91	84.091	ENSCAPG00000006768	SNRNP48	100	83.766	Cavia_aperea
ENSMICG00000012497	SNRNP48	100	87.316	ENSCPOG00000007910	SNRNP48	100	87.316	Cavia_porcellus
ENSMICG00000012497	SNRNP48	100	90.560	ENSCCAG00000035652	SNRNP48	100	90.560	Cebus_capucinus
ENSMICG00000012497	SNRNP48	100	91.740	ENSCATG00000033947	SNRNP48	100	91.740	Cercocebus_atys
ENSMICG00000012497	SNRNP48	100	87.611	ENSCLAG00000003765	SNRNP48	100	87.611	Chinchilla_lanigera
ENSMICG00000012497	SNRNP48	100	92.330	ENSCSAG00000007409	SNRNP48	100	92.330	Chlorocebus_sabaeus
ENSMICG00000012497	SNRNP48	85	64.238	ENSCPBG00000019146	SNRNP48	90	65.085	Chrysemys_picta_bellii
ENSMICG00000012497	SNRNP48	100	92.330	ENSCANG00000030017	SNRNP48	100	92.330	Colobus_angolensis_palliatus
ENSMICG00000012497	SNRNP48	100	87.906	ENSCGRG00001001076	-	100	87.021	Cricetulus_griseus_chok1gshd
ENSMICG00000012497	SNRNP48	99	69.851	ENSCGRG00001008805	-	95	69.254	Cricetulus_griseus_chok1gshd
ENSMICG00000012497	SNRNP48	100	87.906	ENSCGRG00000007781	Snrnp48	100	87.021	Cricetulus_griseus_crigri
ENSMICG00000012497	SNRNP48	77	49.242	ENSCSEG00000000722	snrnp48	72	49.242	Cynoglossus_semilaevis
ENSMICG00000012497	SNRNP48	89	45.223	ENSCVAG00000019829	snrnp48	70	46.931	Cyprinodon_variegatus
ENSMICG00000012497	SNRNP48	81	47.350	ENSDARG00000039989	snrnp48	81	46.290	Danio_rerio
ENSMICG00000012497	SNRNP48	100	88.529	ENSDNOG00000014978	SNRNP48	100	88.529	Dasypus_novemcinctus
ENSMICG00000012497	SNRNP48	99	87.611	ENSDORG00000015140	Snrnp48	100	86.765	Dipodomys_ordii
ENSMICG00000012497	SNRNP48	99	91.124	ENSEASG00005012021	SNRNP48	100	90.855	Equus_asinus_asinus
ENSMICG00000012497	SNRNP48	100	91.740	ENSECAG00000026937	SNRNP48	100	91.740	Equus_caballus
ENSMICG00000012497	SNRNP48	100	69.412	ENSEEUG00000015437	SNRNP48	99	69.118	Erinaceus_europaeus
ENSMICG00000012497	SNRNP48	88	47.386	ENSELUG00000009766	snrnp48	78	48.592	Esox_lucius
ENSMICG00000012497	SNRNP48	100	90.560	ENSFCAG00000018853	SNRNP48	100	90.560	Felis_catus
ENSMICG00000012497	SNRNP48	83	65.411	ENSFALG00000007797	SNRNP48	92	65.398	Ficedula_albicollis
ENSMICG00000012497	SNRNP48	99	88.462	ENSFDAG00000009231	SNRNP48	100	88.201	Fukomys_damarensis
ENSMICG00000012497	SNRNP48	59	55.941	ENSFHEG00000014647	snrnp48	97	45.638	Fundulus_heteroclitus
ENSMICG00000012497	SNRNP48	73	46.850	ENSGMOG00000018599	-	86	45.423	Gadus_morhua
ENSMICG00000012497	SNRNP48	78	66.182	ENSGALG00000013005	SNRNP48	82	67.490	Gallus_gallus
ENSMICG00000012497	SNRNP48	74	49.612	ENSGAFG00000021639	snrnp48	80	46.875	Gambusia_affinis
ENSMICG00000012497	SNRNP48	71	49.794	ENSGACG00000017756	-	84	47.222	Gasterosteus_aculeatus
ENSMICG00000012497	SNRNP48	84	63.333	ENSGAGG00000000865	SNRNP48	96	64.068	Gopherus_agassizii
ENSMICG00000012497	SNRNP48	100	92.330	ENSGGOG00000013220	SNRNP48	100	92.330	Gorilla_gorilla
ENSMICG00000012497	SNRNP48	76	47.328	ENSHBUG00000017066	snrnp48	83	45.763	Haplochromis_burtoni
ENSMICG00000012497	SNRNP48	99	88.757	ENSHGLG00000015241	SNRNP48	100	88.496	Heterocephalus_glaber_female
ENSMICG00000012497	SNRNP48	99	88.757	ENSHGLG00100010027	SNRNP48	100	88.496	Heterocephalus_glaber_male
ENSMICG00000012497	SNRNP48	73	45.635	ENSHCOG00000014066	snrnp48	83	43.836	Hippocampus_comes
ENSMICG00000012497	SNRNP48	100	91.740	ENSSTOG00000014635	SNRNP48	100	92.000	Ictidomys_tridecemlineatus
ENSMICG00000012497	SNRNP48	100	83.186	ENSJJAG00000011495	Snrnp48	100	83.186	Jaculus_jaculus
ENSMICG00000012497	SNRNP48	95	43.252	ENSKMAG00000016514	snrnp48	80	46.099	Kryptolebias_marmoratus
ENSMICG00000012497	SNRNP48	76	48.092	ENSLBEG00000026249	snrnp48	95	42.029	Labrus_bergylta
ENSMICG00000012497	SNRNP48	96	54.491	ENSLACG00000003958	SNRNP48	96	54.491	Latimeria_chalumnae
ENSMICG00000012497	SNRNP48	83	50.694	ENSLOCG00000004187	snrnp48	84	51.034	Lepisosteus_oculatus
ENSMICG00000012497	SNRNP48	100	87.906	ENSLAFG00000011152	SNRNP48	100	87.906	Loxodonta_africana
ENSMICG00000012497	SNRNP48	100	92.625	ENSMFAG00000045216	SNRNP48	100	92.625	Macaca_fascicularis
ENSMICG00000012497	SNRNP48	100	92.625	ENSMMUG00000014785	SNRNP48	100	92.625	Macaca_mulatta
ENSMICG00000012497	SNRNP48	100	92.625	ENSMNEG00000042269	SNRNP48	100	92.625	Macaca_nemestrina
ENSMICG00000012497	SNRNP48	100	92.625	ENSMLEG00000034004	SNRNP48	100	92.625	Mandrillus_leucophaeus
ENSMICG00000012497	SNRNP48	76	47.925	ENSMAMG00000018673	snrnp48	71	47.872	Mastacembelus_armatus
ENSMICG00000012497	SNRNP48	83	64.726	ENSMGAG00000006037	SNRNP48	99	64.384	Meleagris_gallopavo
ENSMICG00000012497	SNRNP48	100	88.201	ENSMAUG00000011944	Snrnp48	100	87.316	Mesocricetus_auratus
ENSMICG00000012497	SNRNP48	100	87.611	ENSMOCG00000015555	Snrnp48	100	86.726	Microtus_ochrogaster
ENSMICG00000012497	SNRNP48	54	53.226	ENSMMOG00000003072	-	58	53.226	Mola_mola
ENSMICG00000012497	SNRNP48	98	69.767	ENSMODG00000009996	SNRNP48	93	69.186	Monodelphis_domestica
ENSMICG00000012497	SNRNP48	74	50.588	ENSMALG00000005725	snrnp48	80	47.518	Monopterus_albus
ENSMICG00000012497	SNRNP48	100	87.906	MGP_CAROLIEiJ_G0018441	Snrnp48	100	87.021	Mus_caroli
ENSMICG00000012497	SNRNP48	100	87.316	ENSMUSG00000021431	Snrnp48	100	86.431	Mus_musculus
ENSMICG00000012497	SNRNP48	100	87.316	MGP_PahariEiJ_G0019509	Snrnp48	100	86.431	Mus_pahari
ENSMICG00000012497	SNRNP48	100	87.021	MGP_SPRETEiJ_G0019321	Snrnp48	100	86.136	Mus_spretus
ENSMICG00000012497	SNRNP48	99	86.686	ENSNGAG00000004849	Snrnp48	99	86.686	Nannospalax_galili
ENSMICG00000012497	SNRNP48	76	46.947	ENSNBRG00000012127	snrnp48	82	45.862	Neolamprologus_brichardi
ENSMICG00000012497	SNRNP48	100	92.625	ENSNLEG00000011667	SNRNP48	100	92.625	Nomascus_leucogenys
ENSMICG00000012497	SNRNP48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.328	Ochotona_princeps
ENSMICG00000012497	SNRNP48	74	47.860	ENSONIG00000001520	snrnp48	95	41.547	Oreochromis_niloticus
ENSMICG00000012497	SNRNP48	57	63.462	ENSOANG00000019888	-	100	64.423	Ornithorhynchus_anatinus
ENSMICG00000012497	SNRNP48	84	89.510	ENSOCUG00000005168	SNRNP48	100	89.145	Oryctolagus_cuniculus
ENSMICG00000012497	SNRNP48	88	46.602	ENSORLG00000015654	snrnp48	82	47.079	Oryzias_latipes
ENSMICG00000012497	SNRNP48	88	45.631	ENSORLG00020015976	snrnp48	70	46.048	Oryzias_latipes_hni
ENSMICG00000012497	SNRNP48	88	46.753	ENSORLG00015022379	snrnp48	71	47.079	Oryzias_latipes_hsok
ENSMICG00000012497	SNRNP48	83	46.875	ENSOMEG00000022007	snrnp48	82	46.713	Oryzias_melastigma
ENSMICG00000012497	SNRNP48	92	92.283	ENSOGAG00000005275	SNRNP48	96	92.429	Otolemur_garnettii
ENSMICG00000012497	SNRNP48	85	87.108	ENSOARG00000017319	SNRNP48	99	87.279	Ovis_aries
ENSMICG00000012497	SNRNP48	100	92.625	ENSPPAG00000032873	SNRNP48	100	92.625	Pan_paniscus
ENSMICG00000012497	SNRNP48	100	90.855	ENSPPRG00000004283	SNRNP48	100	90.855	Panthera_pardus
ENSMICG00000012497	SNRNP48	85	90.941	ENSPTIG00000013502	SNRNP48	99	91.166	Panthera_tigris_altaica
ENSMICG00000012497	SNRNP48	100	92.625	ENSPTRG00000017703	SNRNP48	100	92.625	Pan_troglodytes
ENSMICG00000012497	SNRNP48	100	92.625	ENSPANG00000000771	SNRNP48	100	92.625	Papio_anubis
ENSMICG00000012497	SNRNP48	94	46.243	ENSPKIG00000013703	snrnp48	59	50.000	Paramormyrops_kingsleyae
ENSMICG00000012497	SNRNP48	87	61.613	ENSPSIG00000002213	SNRNP48	92	62.799	Pelodiscus_sinensis
ENSMICG00000012497	SNRNP48	75	47.547	ENSPMGG00000008120	snrnp48	92	47.547	Periophthalmus_magnuspinnatus
ENSMICG00000012497	SNRNP48	100	88.201	ENSPEMG00000008872	Snrnp48	100	87.906	Peromyscus_maniculatus_bairdii
ENSMICG00000012497	SNRNP48	73	51.190	ENSPFOG00000003578	snrnp48	80	49.470	Poecilia_formosa
ENSMICG00000012497	SNRNP48	67	50.870	ENSPLAG00000002290	snrnp48	77	50.435	Poecilia_latipinna
ENSMICG00000012497	SNRNP48	73	50.397	ENSPMEG00000018033	snrnp48	80	48.763	Poecilia_mexicana
ENSMICG00000012497	SNRNP48	72	51.012	ENSPREG00000018541	snrnp48	80	48.410	Poecilia_reticulata
ENSMICG00000012497	SNRNP48	100	91.150	ENSPPYG00000016209	SNRNP48	100	91.150	Pongo_abelii
ENSMICG00000012497	SNRNP48	79	71.269	ENSPCAG00000011991	SNRNP48	100	71.269	Procavia_capensis
ENSMICG00000012497	SNRNP48	100	89.381	ENSPVAG00000002854	SNRNP48	100	89.381	Pteropus_vampyrus
ENSMICG00000012497	SNRNP48	76	47.710	ENSPNYG00000015399	snrnp48	92	46.102	Pundamilia_nyererei
ENSMICG00000012497	SNRNP48	100	87.906	ENSRNOG00000013756	Snrnp48	100	87.021	Rattus_norvegicus
ENSMICG00000012497	SNRNP48	91	91.613	ENSRBIG00000043856	SNRNP48	97	92.105	Rhinopithecus_bieti
ENSMICG00000012497	SNRNP48	100	92.330	ENSRROG00000043229	SNRNP48	100	92.330	Rhinopithecus_roxellana
ENSMICG00000012497	SNRNP48	100	92.035	ENSSBOG00000019486	SNRNP48	100	92.035	Saimiri_boliviensis_boliviensis
ENSMICG00000012497	SNRNP48	98	70.349	ENSSHAG00000014483	SNRNP48	99	70.349	Sarcophilus_harrisii
ENSMICG00000012497	SNRNP48	74	51.953	ENSSFOG00015006610	snrnp48	70	49.164	Scleropages_formosus
ENSMICG00000012497	SNRNP48	84	46.713	ENSSDUG00000014953	snrnp48	92	42.553	Seriola_dumerili
ENSMICG00000012497	SNRNP48	79	48.387	ENSSLDG00000005989	snrnp48	92	42.604	Seriola_lalandi_dorsalis
ENSMICG00000012497	SNRNP48	84	66.443	ENSSPUG00000006257	SNRNP48	84	66.894	Sphenodon_punctatus
ENSMICG00000012497	SNRNP48	78	48.364	ENSSPAG00000006454	snrnp48	80	47.687	Stegastes_partitus
ENSMICG00000012497	SNRNP48	83	64.261	ENSTGUG00000007575	SNRNP48	92	64.236	Taeniopygia_guttata
ENSMICG00000012497	SNRNP48	71	50.000	ENSTRUG00000007031	snrnp48	80	48.727	Takifugu_rubripes
ENSMICG00000012497	SNRNP48	98	39.403	ENSTNIG00000012977	-	94	37.427	Tetraodon_nigroviridis
ENSMICG00000012497	SNRNP48	78	89.098	ENSTBEG00000015620	SNRNP48	79	89.098	Tupaia_belangeri
ENSMICG00000012497	SNRNP48	100	88.791	ENSTTRG00000016715	SNRNP48	100	88.791	Tursiops_truncatus
ENSMICG00000012497	SNRNP48	100	89.381	ENSUAMG00000003690	SNRNP48	100	88.201	Ursus_americanus
ENSMICG00000012497	SNRNP48	85	86.411	ENSVPAG00000003557	SNRNP48	99	86.219	Vicugna_pacos
ENSMICG00000012497	SNRNP48	99	89.614	ENSVVUG00000004996	SNRNP48	99	89.614	Vulpes_vulpes
ENSMICG00000012497	SNRNP48	90	51.118	ENSXETG00000020447	snrnp48	99	49.288	Xenopus_tropicalis
ENSMICG00000012497	SNRNP48	67	50.216	ENSXCOG00000004478	snrnp48	69	50.216	Xiphophorus_couchianus
ENSMICG00000012497	SNRNP48	82	48.929	ENSXMAG00000013595	snrnp48	80	48.057	Xiphophorus_maculatus