EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000012779 (Gene tree)
Gene ID: 105877295
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 91048 bases
Position: chr12:49698863-49789910
Accession: 105877295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000049785	rRNA_proc-arch	PF13234.6	2e-87	1	1
ENSMICP00000011664	rRNA_proc-arch	PF13234.6	2e-87	1	1
ENSMICP00000025545	rRNA_proc-arch	PF13234.6	2e-87	1	1
ENSMICP00000049785	DEAD	PF00270.29	5.8e-17	1	1
ENSMICP00000011664	DEAD	PF00270.29	5.9e-17	1	1
ENSMICP00000025545	DEAD	PF00270.29	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000070505	MTREX-201	3591	XM_012775694	ENSMICP00000049785	1042 (aa)	XP_012631148	UPI000643B9BD
ENSMICT00000036286	MTREX-203	3159	-	ENSMICP00000025545	1052 (aa)	-	UPI000C2EC4CE
ENSMICT00000012804	MTREX-202	3150	-	ENSMICP00000011664	1049 (aa)	-	UPI000C2EAB17

Gene Model

Click here to download ENSMICG00000012779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000012779	MTREX	89	36.890	ENSMICG00000046331	SKIV2L	77	36.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012779	MTREX	100	99.328	ENSG00000039123	MTREX	100	99.328	Homo_sapiens
ENSMICG00000012779	MTREX	100	83.619	ENSAPOG00000007814	mtrex	100	83.588	Acanthochromis_polyacanthus
ENSMICG00000012779	MTREX	100	98.945	ENSAMEG00000013856	MTREX	100	98.945	Ailuropoda_melanoleuca
ENSMICG00000012779	MTREX	100	82.051	ENSACIG00000015117	mtrex	96	88.088	Amphilophus_citrinellus
ENSMICG00000012779	MTREX	100	83.619	ENSAOCG00000011884	mtrex	100	83.619	Amphiprion_ocellaris
ENSMICG00000012779	MTREX	100	83.524	ENSAPEG00000019384	mtrex	100	83.524	Amphiprion_percula
ENSMICG00000012779	MTREX	100	84.271	ENSATEG00000015117	mtrex	100	84.271	Anabas_testudineus
ENSMICG00000012779	MTREX	95	93.023	ENSAPLG00000009694	MTREX	99	93.023	Anas_platyrhynchos
ENSMICG00000012779	MTREX	100	91.267	ENSACAG00000015200	MTREX	96	91.075	Anolis_carolinensis
ENSMICG00000012779	MTREX	100	99.328	ENSANAG00000023095	MTREX	100	99.328	Aotus_nancymaae
ENSMICG00000012779	MTREX	100	83.015	ENSACLG00000001921	mtrex	100	82.936	Astatotilapia_calliptera
ENSMICG00000012779	MTREX	97	81.827	ENSAMXG00000018751	mtrex	99	84.137	Astyanax_mexicanus
ENSMICG00000012779	MTREX	100	98.752	ENSBTAG00000010518	MTREX	100	98.752	Bos_taurus
ENSMICG00000012779	MTREX	91	53.628	WBGene00012342	mtr-4	97	51.980	Caenorhabditis_elegans
ENSMICG00000012779	MTREX	100	98.381	ENSCJAG00000001773	MTREX	100	98.381	Callithrix_jacchus
ENSMICG00000012779	MTREX	100	99.040	ENSCAFG00000006818	MTREX	100	99.040	Canis_familiaris
ENSMICG00000012779	MTREX	100	99.040	ENSCAFG00020024352	MTREX	100	99.040	Canis_lupus_dingo
ENSMICG00000012779	MTREX	100	98.848	ENSCHIG00000024413	MTREX	100	98.848	Capra_hircus
ENSMICG00000012779	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSMICG00000012779	MTREX	96	74.048	ENSCAPG00000008696	MTREX	100	74.048	Cavia_aperea
ENSMICG00000012779	MTREX	100	98.464	ENSCPOG00000009797	MTREX	100	98.464	Cavia_porcellus
ENSMICG00000012779	MTREX	100	99.232	ENSCCAG00000014177	MTREX	100	99.232	Cebus_capucinus
ENSMICG00000012779	MTREX	100	99.136	ENSCATG00000042153	MTREX	100	99.136	Cercocebus_atys
ENSMICG00000012779	MTREX	100	98.369	ENSCLAG00000006622	MTREX	100	98.369	Chinchilla_lanigera
ENSMICG00000012779	MTREX	100	94.641	ENSCSAG00000016445	MTREX	100	94.641	Chlorocebus_sabaeus
ENSMICG00000012779	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSMICG00000012779	MTREX	100	92.522	ENSCPBG00000026551	MTREX	94	92.522	Chrysemys_picta_bellii
ENSMICG00000012779	MTREX	99	66.444	ENSCING00000003239	-	99	66.252	Ciona_intestinalis
ENSMICG00000012779	MTREX	99	65.396	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSMICG00000012779	MTREX	100	99.040	ENSCANG00000035770	MTREX	100	99.040	Colobus_angolensis_palliatus
ENSMICG00000012779	MTREX	100	98.081	ENSCGRG00001024680	Mtrex	100	98.081	Cricetulus_griseus_chok1gshd
ENSMICG00000012779	MTREX	100	98.081	ENSCGRG00000000307	Mtrex	100	98.081	Cricetulus_griseus_crigri
ENSMICG00000012779	MTREX	100	82.235	ENSCSEG00000018621	mtrex	98	82.235	Cynoglossus_semilaevis
ENSMICG00000012779	MTREX	100	83.985	ENSCVAG00000004556	mtrex	100	83.954	Cyprinodon_variegatus
ENSMICG00000012779	MTREX	100	85.100	ENSDARG00000013457	mtrex	100	85.005	Danio_rerio
ENSMICG00000012779	MTREX	100	97.610	ENSDNOG00000015375	MTREX	100	97.610	Dasypus_novemcinctus
ENSMICG00000012779	MTREX	100	98.656	ENSDORG00000006782	Mtrex	100	98.656	Dipodomys_ordii
ENSMICG00000012779	MTREX	99	62.488	FBgn0001986	Mtr4	92	65.988	Drosophila_melanogaster
ENSMICG00000012779	MTREX	90	81.155	ENSETEG00000000727	MTREX	90	81.155	Echinops_telfairi
ENSMICG00000012779	MTREX	99	74.302	ENSEBUG00000012869	mtrex	99	73.805	Eptatretus_burgeri
ENSMICG00000012779	MTREX	100	98.560	ENSEASG00005013270	MTREX	100	98.560	Equus_asinus_asinus
ENSMICG00000012779	MTREX	100	98.656	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSMICG00000012779	MTREX	98	88.683	ENSEEUG00000000527	MTREX	100	88.683	Erinaceus_europaeus
ENSMICG00000012779	MTREX	98	85.257	ENSELUG00000004898	mtrex	100	89.706	Esox_lucius
ENSMICG00000012779	MTREX	100	98.848	ENSFCAG00000010575	MTREX	100	98.848	Felis_catus
ENSMICG00000012779	MTREX	100	90.115	ENSFALG00000010850	MTREX	100	90.019	Ficedula_albicollis
ENSMICG00000012779	MTREX	100	97.985	ENSFDAG00000011199	MTREX	100	97.985	Fukomys_damarensis
ENSMICG00000012779	MTREX	100	83.985	ENSFHEG00000023014	mtrex	100	82.543	Fundulus_heteroclitus
ENSMICG00000012779	MTREX	100	79.676	ENSGMOG00000014702	mtrex	100	79.962	Gadus_morhua
ENSMICG00000012779	MTREX	100	91.267	ENSGALG00000014709	MTREX	86	91.267	Gallus_gallus
ENSMICG00000012779	MTREX	100	84.080	ENSGAFG00000012425	mtrex	98	87.603	Gambusia_affinis
ENSMICG00000012779	MTREX	100	79.600	ENSGACG00000016260	mtrex	96	85.435	Gasterosteus_aculeatus
ENSMICG00000012779	MTREX	100	92.234	ENSGAGG00000020036	MTREX	100	91.850	Gopherus_agassizii
ENSMICG00000012779	MTREX	100	99.424	ENSGGOG00000001867	MTREX	100	99.424	Gorilla_gorilla
ENSMICG00000012779	MTREX	100	83.015	ENSHBUG00000006229	mtrex	100	82.936	Haplochromis_burtoni
ENSMICG00000012779	MTREX	100	98.273	ENSHGLG00000019445	SKIV2L2	100	98.273	Heterocephalus_glaber_female
ENSMICG00000012779	MTREX	100	98.273	ENSHGLG00100011833	SKIV2L2	100	98.273	Heterocephalus_glaber_male
ENSMICG00000012779	MTREX	91	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSMICG00000012779	MTREX	100	85.673	ENSIPUG00000024348	skiv2l2	100	85.468	Ictalurus_punctatus
ENSMICG00000012779	MTREX	100	98.944	ENSSTOG00000010802	MTREX	100	98.944	Ictidomys_tridecemlineatus
ENSMICG00000012779	MTREX	100	91.843	ENSJJAG00000020975	Mtrex	100	91.843	Jaculus_jaculus
ENSMICG00000012779	MTREX	100	83.317	ENSKMAG00000012642	mtrex	100	83.127	Kryptolebias_marmoratus
ENSMICG00000012779	MTREX	100	83.524	ENSLBEG00000019367	mtrex	99	86.444	Labrus_bergylta
ENSMICG00000012779	MTREX	100	88.889	ENSLACG00000009075	MTREX	100	88.443	Latimeria_chalumnae
ENSMICG00000012779	MTREX	100	87.452	ENSLOCG00000010186	mtrex	100	87.069	Lepisosteus_oculatus
ENSMICG00000012779	MTREX	99	96.449	ENSLAFG00000010497	MTREX	100	96.449	Loxodonta_africana
ENSMICG00000012779	MTREX	100	99.136	ENSMFAG00000031610	MTREX	100	99.136	Macaca_fascicularis
ENSMICG00000012779	MTREX	100	97.605	ENSMMUG00000010379	MTREX	100	97.605	Macaca_mulatta
ENSMICG00000012779	MTREX	100	99.136	ENSMNEG00000032746	MTREX	100	99.136	Macaca_nemestrina
ENSMICG00000012779	MTREX	100	99.136	ENSMLEG00000041051	MTREX	100	99.136	Mandrillus_leucophaeus
ENSMICG00000012779	MTREX	100	82.448	ENSMAMG00000016753	mtrex	96	88.622	Mastacembelus_armatus
ENSMICG00000012779	MTREX	100	83.015	ENSMZEG00005000414	mtrex	100	82.936	Maylandia_zebra
ENSMICG00000012779	MTREX	94	67.814	ENSMGAG00000003980	MTREX	99	67.814	Meleagris_gallopavo
ENSMICG00000012779	MTREX	100	97.985	ENSMAUG00000010727	Mtrex	100	97.985	Mesocricetus_auratus
ENSMICG00000012779	MTREX	100	98.081	ENSMOCG00000019886	Mtrex	100	98.081	Microtus_ochrogaster
ENSMICG00000012779	MTREX	100	81.775	ENSMMOG00000002476	mtrex	100	81.966	Mola_mola
ENSMICG00000012779	MTREX	100	93.570	ENSMODG00000019494	MTREX	100	93.570	Monodelphis_domestica
ENSMICG00000012779	MTREX	92	82.702	ENSMALG00000002917	mtrex	99	82.702	Monopterus_albus
ENSMICG00000012779	MTREX	100	97.505	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.505	Mus_caroli
ENSMICG00000012779	MTREX	100	97.793	ENSMUSG00000016018	Mtrex	100	97.793	Mus_musculus
ENSMICG00000012779	MTREX	100	97.697	MGP_PahariEiJ_G0015967	Mtrex	100	97.697	Mus_pahari
ENSMICG00000012779	MTREX	100	97.793	MGP_SPRETEiJ_G0019775	Mtrex	100	97.793	Mus_spretus
ENSMICG00000012779	MTREX	100	99.232	ENSMPUG00000007619	MTREX	100	99.232	Mustela_putorius_furo
ENSMICG00000012779	MTREX	100	96.938	ENSMLUG00000001152	MTREX	100	96.938	Myotis_lucifugus
ENSMICG00000012779	MTREX	100	98.560	ENSNGAG00000011938	Mtrex	100	98.560	Nannospalax_galili
ENSMICG00000012779	MTREX	100	83.111	ENSNBRG00000011293	mtrex	100	83.031	Neolamprologus_brichardi
ENSMICG00000012779	MTREX	100	95.211	ENSNLEG00000001494	MTREX	100	95.211	Nomascus_leucogenys
ENSMICG00000012779	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSMICG00000012779	MTREX	100	83.013	ENSOPRG00000008009	MTREX	100	83.013	Ochotona_princeps
ENSMICG00000012779	MTREX	100	97.697	ENSODEG00000017234	MTREX	100	97.697	Octodon_degus
ENSMICG00000012779	MTREX	100	82.920	ENSONIG00000007587	mtrex	100	82.841	Oreochromis_niloticus
ENSMICG00000012779	MTREX	100	99.040	ENSOCUG00000004463	MTREX	100	99.040	Oryctolagus_cuniculus
ENSMICG00000012779	MTREX	100	82.936	ENSORLG00000005443	mtrex	100	82.745	Oryzias_latipes
ENSMICG00000012779	MTREX	100	82.841	ENSORLG00020006329	mtrex	100	82.650	Oryzias_latipes_hni
ENSMICG00000012779	MTREX	100	82.716	ENSORLG00015012924	mtrex	100	82.650	Oryzias_latipes_hsok
ENSMICG00000012779	MTREX	100	82.224	ENSOMEG00000008825	mtrex	100	82.034	Oryzias_melastigma
ENSMICG00000012779	MTREX	100	99.136	ENSOGAG00000002886	MTREX	100	99.136	Otolemur_garnettii
ENSMICG00000012779	MTREX	100	98.565	ENSOARG00000007764	MTREX	100	98.565	Ovis_aries
ENSMICG00000012779	MTREX	100	99.328	ENSPPAG00000039291	MTREX	100	99.328	Pan_paniscus
ENSMICG00000012779	MTREX	100	98.848	ENSPPRG00000019701	MTREX	100	98.848	Panthera_pardus
ENSMICG00000012779	MTREX	100	97.313	ENSPTIG00000009313	MTREX	100	97.313	Panthera_tigris_altaica
ENSMICG00000012779	MTREX	100	99.328	ENSPTRG00000016878	MTREX	100	99.328	Pan_troglodytes
ENSMICG00000012779	MTREX	100	99.040	ENSPANG00000009697	MTREX	100	99.040	Papio_anubis
ENSMICG00000012779	MTREX	100	87.106	ENSPKIG00000020833	mtrex	99	87.996	Paramormyrops_kingsleyae
ENSMICG00000012779	MTREX	100	92.330	ENSPSIG00000012150	MTREX	100	92.330	Pelodiscus_sinensis
ENSMICG00000012779	MTREX	100	81.220	ENSPMGG00000002582	mtrex	100	81.220	Periophthalmus_magnuspinnatus
ENSMICG00000012779	MTREX	95	65.795	ENSPMAG00000009668	mtrex	100	65.462	Petromyzon_marinus
ENSMICG00000012779	MTREX	91	96.938	ENSPCIG00000024730	MTREX	100	96.938	Phascolarctos_cinereus
ENSMICG00000012779	MTREX	75	87.452	ENSPFOG00000003141	mtrex	100	87.690	Poecilia_formosa
ENSMICG00000012779	MTREX	100	83.985	ENSPLAG00000021311	mtrex	100	83.985	Poecilia_latipinna
ENSMICG00000012779	MTREX	91	87.723	ENSPMEG00000010597	mtrex	99	88.038	Poecilia_mexicana
ENSMICG00000012779	MTREX	100	83.699	ENSPREG00000003089	mtrex	100	83.699	Poecilia_reticulata
ENSMICG00000012779	MTREX	98	99.415	ENSPPYG00000015469	MTREX	98	99.415	Pongo_abelii
ENSMICG00000012779	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSMICG00000012779	MTREX	99	93.586	ENSPCOG00000018092	MTREX	100	93.481	Propithecus_coquereli
ENSMICG00000012779	MTREX	100	99.040	ENSPVAG00000002445	MTREX	100	99.040	Pteropus_vampyrus
ENSMICG00000012779	MTREX	100	82.920	ENSPNYG00000006164	mtrex	100	82.841	Pundamilia_nyererei
ENSMICG00000012779	MTREX	100	85.960	ENSPNAG00000008794	mtrex	100	85.960	Pygocentrus_nattereri
ENSMICG00000012779	MTREX	99	97.765	ENSRNOG00000010125	Mtrex	97	97.765	Rattus_norvegicus
ENSMICG00000012779	MTREX	100	97.409	ENSRBIG00000034930	MTREX	100	97.409	Rhinopithecus_bieti
ENSMICG00000012779	MTREX	100	99.136	ENSRROG00000039895	MTREX	100	99.136	Rhinopithecus_roxellana
ENSMICG00000012779	MTREX	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSMICG00000012779	MTREX	100	99.136	ENSSBOG00000026693	MTREX	100	99.136	Saimiri_boliviensis_boliviensis
ENSMICG00000012779	MTREX	96	95.687	ENSSHAG00000004600	MTREX	100	95.687	Sarcophilus_harrisii
ENSMICG00000012779	MTREX	100	87.667	ENSSFOG00015014355	skiv2l2	100	87.572	Scleropages_formosus
ENSMICG00000012779	MTREX	100	83.333	ENSSMAG00000007572	mtrex	100	83.127	Scophthalmus_maximus
ENSMICG00000012779	MTREX	100	83.969	ENSSDUG00000023789	mtrex	100	83.969	Seriola_dumerili
ENSMICG00000012779	MTREX	100	83.874	ENSSLDG00000006301	mtrex	100	83.779	Seriola_lalandi_dorsalis
ENSMICG00000012779	MTREX	100	94.818	ENSSARG00000008387	MTREX	96	99.474	Sorex_araneus
ENSMICG00000012779	MTREX	100	79.866	ENSSPUG00000007071	MTREX	100	80.058	Sphenodon_punctatus
ENSMICG00000012779	MTREX	100	82.342	ENSSPAG00000011319	mtrex	94	88.038	Stegastes_partitus
ENSMICG00000012779	MTREX	100	99.040	ENSSSCG00000016911	MTREX	100	99.040	Sus_scrofa
ENSMICG00000012779	MTREX	100	89.933	ENSTGUG00000002480	MTREX	100	89.933	Taeniopygia_guttata
ENSMICG00000012779	MTREX	100	83.048	ENSTRUG00000014571	mtrex	100	83.048	Takifugu_rubripes
ENSMICG00000012779	MTREX	100	83.013	ENSTBEG00000007769	MTREX	100	83.013	Tupaia_belangeri
ENSMICG00000012779	MTREX	100	98.560	ENSTTRG00000008678	MTREX	100	98.560	Tursiops_truncatus
ENSMICG00000012779	MTREX	100	98.848	ENSUAMG00000023061	MTREX	100	98.848	Ursus_americanus
ENSMICG00000012779	MTREX	100	98.276	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSMICG00000012779	MTREX	100	87.812	ENSVPAG00000011174	MTREX	100	87.812	Vicugna_pacos
ENSMICG00000012779	MTREX	100	99.232	ENSVVUG00000021337	MTREX	100	99.232	Vulpes_vulpes
ENSMICG00000012779	MTREX	100	88.686	ENSXETG00000032798	MTREX	100	88.686	Xenopus_tropicalis
ENSMICG00000012779	MTREX	100	83.794	ENSXMAG00000004799	mtrex	97	87.683	Xiphophorus_maculatus